1
0
mirror of https://git.FreeBSD.org/ports.git synced 2024-12-18 03:46:03 +00:00
freebsd-ports/science
Tijl Coosemans 323dfa7d83 Remove libtiff.so.4 compatibility links that were added in r374303 to
prevent massive PORTREVISION bumps.  Bump dependent ports that have not
been bumped since.
2016-12-08 16:07:33 +00:00
..
2d-rewriter
afni science/afni: Use BUILD_DEPENDS/RUN_DEPENDS instead of LIB_DEPENDS for 2016-11-29 21:15:41 +00:00
avogadro devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
bddsolve devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
bft
bodr
brian math/py-numpy: track PORTEPOCH in consumers 2016-10-28 17:13:24 +00:00
buddy
cdcl Remove libtiff.so.4 compatibility links that were added in r374303 to 2016-12-08 16:07:33 +00:00
cdf Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
cdo - Add missing CGRIBEX_DESC 2016-12-03 16:32:29 +00:00
cgnslib Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
cgribex - Update to 1.7.5 2016-11-19 17:04:33 +00:00
checkmol
chemical-mime-data Use USES=pathfix where applicable. 2016-10-21 15:21:13 +00:00
chemtool
chemtool-devel
clhep Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-11-20 09:38:08 +00:00
colt
crf++
dcl Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
devisor
dlpoly-classic Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
ecs
epte science/epte: Add forgetten patch hunk from previous commit 2016-08-28 05:56:01 +00:00
fastcap Mark as broken on aarch64: fails to link with sbrk. 2016-11-10 01:21:43 +00:00
fasthenry Mark as broken on aarch64: fails to link with sbrk. 2016-11-10 01:21:43 +00:00
fisicalab
fvcom Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
fvcom-mpi
fvm Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
gchemutils Mark various leaf ports broken on aarch64, and, where appropriate, other 2016-11-11 09:31:02 +00:00
getdp Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
ghemical Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
ghmm
gnudatalanguage Do not use post-stage. Use post-install instead. 2016-12-02 11:58:21 +00:00
gramps science/gramps: Update to 4.2.4 2016-09-24 10:42:20 +00:00
grib_api - Update to 1.18.0 2016-11-19 17:04:38 +00:00
gromacs Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
gsmc
gtamsanalyzer
gwyddion Most commonly used build systems support silent builds, when they 2016-09-09 19:42:46 +00:00
h5utils
harminv Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
hdf Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
hdf5 Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
hdf5-18 Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
hs-bio
InsightToolkit Fix pkg-plist post r424008 2016-10-15 14:07:24 +00:00
isaac-cfd Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
jstrack Remove libtiff.so.4 compatibility links that were added in r374303 to 2016-12-08 16:07:33 +00:00
kalzium Introduce new extensible virtual categories for KDE 2016-10-18 17:22:35 +00:00
kst2 Reassign makc's ports back to the pool. 2016-10-20 15:58:12 +00:00
lamprop
libctl Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
libghemical Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
libint Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-11-20 09:38:08 +00:00
libkml Don't quote {} in find -exec calls. 2016-12-01 11:18:03 +00:00
liblinear
liboglappth
libquantum
libsvm When there is a do-install target, do not use a post-install target, do 2016-07-19 11:04:13 +00:00
libsvm-python
libxc Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
linsmith
massxpert Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-11-20 09:38:08 +00:00
mbdyn Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
mcstas Do not use post-stage. Use post-install instead. 2016-12-02 11:58:21 +00:00
mcstas-comps
medit
meep Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
mei
metaf2xml The correct way to check for Perl's version is with PERL_LEVEL. 2016-10-27 17:21:09 +00:00
minc2 ${RM} already has -f. 2016-10-21 12:51:40 +00:00
mol2ps
mpb Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
mpqc Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
mpqc-mpich
ncs Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
netcdf - Update to 4.4.1.1 2016-11-22 18:42:56 +00:00
netcdf-cxx
netcdf-fortran Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
nifticlib
openbabel Reassign makc's ports back to the pool. 2016-10-20 15:58:12 +00:00
openkim Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
orthanc devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
orthanc-dicomweb devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
orthanc-postgresql devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
orthanc-webviewer devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR - Update to 1.36 2016-12-03 07:59:16 +00:00
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
paje
paraview
pnetcdf Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
psychopy Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
pulseview devel/boost-*: update to 1.62.0 2016-11-23 12:45:46 +00:00
py-cdo - Update to 1.3.2 2016-11-19 17:07:10 +00:00
py-coards
py-DendroPy
py-h5py - Remove bogus NO_ARCH: this module installs .so files 2016-11-24 14:57:16 +00:00
py-hcluster
py-mdp
py-mlpy
py-netCDF4
py-obspy Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
py-paida
py-pupynere
py-pyaixi Convert CC license names to r421995 spellings 2016-09-28 06:38:00 +00:00
py-pydicom - Fix build by removing unneeded patch 2016-11-15 12:05:46 +00:00
py-pysal - Update to 1.12.0 2016-11-19 17:07:15 +00:00
py-pyteomics Update to 3.4 2016-12-01 23:52:38 +00:00
py-pyteomics.biolccc Reassign makc's ports back to the pool. 2016-10-20 15:58:12 +00:00
py-scikit-fuzzy - Update to 0.2 2016-06-30 08:09:29 +00:00
py-scikit-learn Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
py-scikit-sparse Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
py-scimath
py-scipy Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
py-ws2300
pybrain
pycdf In several dozen ports, use single space for WWW: line in pkg-descr, and 2016-11-22 14:04:21 +00:00
pynn - Update to 0.8.1 2016-10-19 08:53:29 +00:00
qcl
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi - Update to 2.7 2016-10-15 04:49:01 +00:00
R-cran-epicalc
R-cran-etm
R-cran-snow - Update to 0.4-2 2016-10-16 04:21:12 +00:00
R-cran-som - Update to 0.3-5.1 2016-07-21 03:18:24 +00:00
rubygem-ai4r
rubygem-cdo - Update to 1.3.2 2016-12-03 19:34:30 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf
sigrok-cli Take maintainership. 2016-10-09 21:25:24 +00:00
sigrok-firmware Take maintainership. 2016-10-09 21:25:24 +00:00
sigrok-firmware-fx2lafw science/sigrok-firmware-fx2lafw: Update to version 0.1.4. 2016-11-03 18:30:42 +00:00
sigrok-firmware-utils Take maintainership. 2016-10-09 21:25:24 +00:00
silo Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
simlib Fix some misspellings that crept in on the last tier-2 cleanup pass. 2016-11-16 09:29:15 +00:00
simsmith
step Introduce new extensible virtual categories for KDE 2016-10-18 17:22:35 +00:00
svmlight
szip
tfel MFront is a code generator which translates a set of closely related 2016-11-11 16:49:21 +00:00
udunits
v_sim Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-12-07 13:24:56 +00:00
veusz
vmd Bump PORTREVISIONS for ports depending on the canonical version of GCC and 2016-11-20 09:38:08 +00:00
voro++
xfce4-equake-plugin
xmakemol
Makefile Resurrect hdf5-18, because it is required by french/med and french/aster. 2016-11-13 12:32:46 +00:00