Wen Heping 1fc27b753e - Fix build with clang/libc++. ... - Support staging. PR: 184974 Submitted by: tijl@		2013-12-20 15:29:07 +00:00
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ariadne
artemis
avida
babel
biococoa
biojava
blast
blat
boinc-simap
chemeq
clustalw	- Fix build with clang/libc++.	2013-12-20 15:29:07 +00:00
consed
crux	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
embassy	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
emboss	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
fasta
fasta3
fastdnaml
finchtv
fluctuate
garlic
genpak
gff2ps
gmap
gperiodic
grappa	- Respect CC/CFLAGS	2013-12-20 13:27:13 +00:00
hmmer
iolib	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
jalview
lagan
lamarc
libgenome
libsbml	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
linux-foldingathome
mafft
mapm3
migrate
molden
mopac	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
mrbayes	Support stage	2013-12-10 17:54:12 +00:00
mummer
muscle
ncbi-toolkit
njplot
ortep3	USES=fortran, fix LDFLAGS, staging.	2013-12-17 21:24:17 +00:00
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl
p5-bioperl-run
paml
phd2fasta
phrap
phred
phylip
phyml
platon	Version 2013.12.12, USES=fortran, staging.	2013-12-17 21:55:24 +00:00
plink	Fix the build with more standards-compliant compilers such as GCC 4.7. [1]	2013-12-13 09:34:40 +00:00
plinkseq	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
povchem
primer3
protomol	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
psi88	USES=fortran, staging, miscellaneous cleanups.	2013-12-18 16:23:08 +00:00
py-biopython
pycogent
pyfasta
pymol	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
python-nexus
rasmol
recombine
ruby-bio
seaview	In preparation for making libtool generate libraries with a sane name, fix all	2013-12-11 14:43:51 +00:00
seqan
seqio
seqtools
sim4
ssaha
t_coffee	USES=fortran, staging.	2013-12-18 17:24:51 +00:00
tinker	- biology/tinker: USES=fortran, staging.	2013-12-18 18:27:04 +00:00
treepuzzle
treeviewx
tRNAscan-SE
ugene
velvet
wise
xmolwt
Makefile