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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-18 00:10:04 +00:00
freebsd-ports/science/Makefile

527 lines
13 KiB
Makefile

COMMENT = Scientific ports
SUBDIR += 2d-rewriter
SUBDIR += ALPSCore
SUBDIR += ChipmunkPhysics
SUBDIR += InsightToolkit
SUBDIR += InsightToolkit501
SUBDIR += PETSc
SUBDIR += R-cran-DCluster
SUBDIR += R-cran-Epi
SUBDIR += R-cran-FAdist
SUBDIR += R-cran-bayesm
SUBDIR += R-cran-cmprsk
SUBDIR += R-cran-e1071
SUBDIR += R-cran-eco
SUBDIR += R-cran-epicalc
SUBDIR += R-cran-etm
SUBDIR += R-cran-fastICA
SUBDIR += R-cran-kernlab
SUBDIR += R-cran-ks
SUBDIR += R-cran-snow
SUBDIR += R-cran-som
SUBDIR += R-cran-udunits2
SUBDIR += abinit
SUBDIR += afni
SUBDIR += agrum
SUBDIR += aircraft-datcom
SUBDIR += antioch
SUBDIR += apbs
SUBDIR += arbor
SUBDIR += ascent
SUBDIR += atompaw
SUBDIR += avogadro2
SUBDIR += avogadrolibs
SUBDIR += axom
SUBDIR += bagel
SUBDIR += bddsolve
SUBDIR += berkeleygw
SUBDIR += bodr
SUBDIR += bout++
SUBDIR += bout++-merging-filaments
SUBDIR += buddy
SUBDIR += cantera
SUBDIR += cardioid
SUBDIR += cdf
SUBDIR += cdk
SUBDIR += cdo
SUBDIR += cgnslib
SUBDIR += cgribex
SUBDIR += checkmol
SUBDIR += chemical-mime-data
SUBDIR += chemicalfun
SUBDIR += chemps2
SUBDIR += chemtool
SUBDIR += chemtool-devel
SUBDIR += chimes-calculator
SUBDIR += chrono
SUBDIR += cif-tools
SUBDIR += clhep
SUBDIR += clipper
SUBDIR += code_saturne
SUBDIR += colt
SUBDIR += conduit
SUBDIR += coordgenlibs
SUBDIR += cp2k
SUBDIR += cp2k-data
SUBDIR += csvtk
SUBDIR += dakota
SUBDIR += dalton
SUBDIR += dd_package
SUBDIR += devisor
SUBDIR += dftbplus
SUBDIR += dftd3
SUBDIR += dftd4
SUBDIR += dimod
SUBDIR += dirac
SUBDIR += dkh
SUBDIR += dlib-cpp
SUBDIR += drawxtl
SUBDIR += dssp
SUBDIR += dvc
SUBDIR += dwave-preprocessing
SUBDIR += dynare
SUBDIR += eccodes
SUBDIR += elk
SUBDIR += elmerfem
SUBDIR += epte
SUBDIR += erd
SUBDIR += ergo
SUBDIR += erkale
SUBDIR += erkale-pseudopotentials
SUBDIR += fastcap
SUBDIR += fasthenry
SUBDIR += fastjet
SUBDIR += feff10
SUBDIR += fleur
SUBDIR += frontistr
SUBDIR += fsom
SUBDIR += fvcom
SUBDIR += fvcom-mpi
SUBDIR += gabedit
SUBDIR += gamess-us
SUBDIR += gbtolib
SUBDIR += gchemutils
SUBDIR += gcp
SUBDIR += gdma
SUBDIR += geant4
SUBDIR += gemmi
SUBDIR += getdp
SUBDIR += ghemical
SUBDIR += ghmm
SUBDIR += gnudatalanguage
SUBDIR += gpaw-setups
SUBDIR += gramps
SUBDIR += grib_api
SUBDIR += gromacs
SUBDIR += gsmc
SUBDIR += gtamsanalyzer
SUBDIR += h5utils
SUBDIR += h5z-zfp
SUBDIR += harminv
SUBDIR += hdf
SUBDIR += hdf5
SUBDIR += hdf5-110
SUBDIR += hdf5-18
SUBDIR += healpix
SUBDIR += helfem
SUBDIR += hepmc3
SUBDIR += highfive
SUBDIR += hypre
SUBDIR += iboview
SUBDIR += isaac-cfd
SUBDIR += jdftx
SUBDIR += jmol
SUBDIR += jstrack
SUBDIR += kalzium
SUBDIR += kim-api
SUBDIR += kplib
SUBDIR += kst2
SUBDIR += lammps
SUBDIR += lamprop
SUBDIR += latte
SUBDIR += libaec
SUBDIR += libccp4
SUBDIR += libcifpp
SUBDIR += libcint
SUBDIR += libctl
SUBDIR += libecpint
SUBDIR += libefp
SUBDIR += libgetar
SUBDIR += libghemical
SUBDIR += libgridxc
SUBDIR += libint
SUBDIR += libint2
SUBDIR += libint2-psi4
SUBDIR += libkml
SUBDIR += liblinear
SUBDIR += libmbd
SUBDIR += libmsym
SUBDIR += libnegf
SUBDIR += liboglappth
SUBDIR += libpsml
SUBDIR += libquantum
SUBDIR += libssm
SUBDIR += libsvm
SUBDIR += libsvm-python
SUBDIR += libvdwxc
SUBDIR += libxc
SUBDIR += liggghts
SUBDIR += linearelasticity
SUBDIR += linux-zotero
SUBDIR += luscus
SUBDIR += m-aneos
SUBDIR += madness
SUBDIR += maeparser
SUBDIR += massxpert
SUBDIR += mbdyn
SUBDIR += mcpl
SUBDIR += mcstas
SUBDIR += mcstas-comps
SUBDIR += mctc-lib
SUBDIR += mcxtrace
SUBDIR += mcxtrace-comps
SUBDIR += mdynamix
SUBDIR += medit
SUBDIR += meep
SUBDIR += metaphysicl
SUBDIR += minc2
SUBDIR += mmdb2
SUBDIR += mmg
SUBDIR += mmtf-cpp
SUBDIR += mol2ps
SUBDIR += molgif
SUBDIR += molscript
SUBDIR += molsketch
SUBDIR += mopac
SUBDIR += mp2d
SUBDIR += mpb
SUBDIR += mpqc
SUBDIR += mrchem
SUBDIR += mrcpp
SUBDIR += msms
SUBDIR += mstore
SUBDIR += multicharge
SUBDIR += multiwfn
SUBDIR += mutationpp
SUBDIR += namd
SUBDIR += ncrystal
SUBDIR += nest
SUBDIR += netcdf
SUBDIR += netcdf-cxx
SUBDIR += netcdf-fortran
SUBDIR += nifticlib
SUBDIR += nlcglib
SUBDIR += nwchem
SUBDIR += nwchem-data
SUBDIR += ocean
SUBDIR += octopus
SUBDIR += openbabel
SUBDIR += openems
SUBDIR += openkim-models
SUBDIR += openmc
SUBDIR += openmodelica
SUBDIR += openmolcas
SUBDIR += openmx
SUBDIR += opensim-core
SUBDIR += opensph
SUBDIR += opsin
SUBDIR += optench
SUBDIR += orthanc
SUBDIR += orthanc-dicomweb
SUBDIR += orthanc-mysql
SUBDIR += orthanc-postgresql
SUBDIR += orthanc-webviewer
SUBDIR += p5-Chemistry-3DBuilder
SUBDIR += p5-Chemistry-Bond-Find
SUBDIR += p5-Chemistry-Canonicalize
SUBDIR += p5-Chemistry-Elements
SUBDIR += p5-Chemistry-File-MDLMol
SUBDIR += p5-Chemistry-File-Mopac
SUBDIR += p5-Chemistry-File-PDB
SUBDIR += p5-Chemistry-File-SLN
SUBDIR += p5-Chemistry-File-SMARTS
SUBDIR += p5-Chemistry-File-SMILES
SUBDIR += p5-Chemistry-File-VRML
SUBDIR += p5-Chemistry-File-XYZ
SUBDIR += p5-Chemistry-FormulaPattern
SUBDIR += p5-Chemistry-InternalCoords
SUBDIR += p5-Chemistry-Isotope
SUBDIR += p5-Chemistry-MacroMol
SUBDIR += p5-Chemistry-MidasPattern
SUBDIR += p5-Chemistry-Mok
SUBDIR += p5-Chemistry-Mol
SUBDIR += p5-Chemistry-Pattern
SUBDIR += p5-Chemistry-Reaction
SUBDIR += p5-Chemistry-Ring
SUBDIR += p5-Geo-BUFR
SUBDIR += p5-Geo-Calc
SUBDIR += p5-Geo-Coordinates-Converter
SUBDIR += p5-Geo-Coordinates-Converter-iArea
SUBDIR += p5-Geo-Coordinates-Transform
SUBDIR += p5-Geo-WebService-Elevation-USGS
SUBDIR += p5-Mcstas-Tools
SUBDIR += p5-PerlMol
SUBDIR += p5-Physics-Unit
SUBDIR += packmol
SUBDIR += pagmo2
SUBDIR += paje
SUBDIR += paraview
SUBDIR += parthenon
SUBDIR += pastix
SUBDIR += pcmsolver
SUBDIR += phonopy
SUBDIR += plumed
SUBDIR += pnetcdf
SUBDIR += polytope
SUBDIR += precice
SUBDIR += psi4
SUBDIR += pulseview
SUBDIR += py-DendroPy
SUBDIR += py-GPy
SUBDIR += py-GPyOpt
SUBDIR += py-HepMC3
SUBDIR += py-HofstadterTools
SUBDIR += py-MDAnalysis
SUBDIR += py-MDAnalysisTests
SUBDIR += py-OpenFermion
SUBDIR += py-OpenFermion-Dirac
SUBDIR += py-OpenFermion-PySCF
SUBDIR += py-OpenMC
SUBDIR += py-PubChemPy
SUBDIR += py-PyFR
SUBDIR += py-PyNE
SUBDIR += py-SimpleSpectral
SUBDIR += py-abipy
SUBDIR += py-access
SUBDIR += py-arbor
SUBDIR += py-arch
SUBDIR += py-asap3
SUBDIR += py-asdf
SUBDIR += py-asdf-standard
SUBDIR += py-asdf-transform-schemas
SUBDIR += py-ase
SUBDIR += py-atomium
SUBDIR += py-avogadrolibs
SUBDIR += py-boutdata
SUBDIR += py-boututils
SUBDIR += py-cdo
SUBDIR += py-cfgrib
SUBDIR += py-chainer
SUBDIR += py-chainer-chemistry
SUBDIR += py-chempy
SUBDIR += py-cirq-aqt
SUBDIR += py-cirq-core
SUBDIR += py-cirq-google
SUBDIR += py-cirq-ionq
SUBDIR += py-cirq-pasqal
SUBDIR += py-cirq-rigetti
SUBDIR += py-coards
SUBDIR += py-dftbplus
SUBDIR += py-dftd4
SUBDIR += py-dimod
SUBDIR += py-dipy
SUBDIR += py-dlib
SUBDIR += py-dwave-cloud-client
SUBDIR += py-dwave-greedy
SUBDIR += py-dwave-hybrid
SUBDIR += py-dwave-inspector
SUBDIR += py-dwave-neal
SUBDIR += py-dwave-networkx
SUBDIR += py-dwave-ocean-sdk
SUBDIR += py-dwave-optimization
SUBDIR += py-dwave-preprocessing
SUBDIR += py-dwave-samplers
SUBDIR += py-dwave-system
SUBDIR += py-dwave-tabu
SUBDIR += py-dwavebinarycsp
SUBDIR += py-earthpy
SUBDIR += py-eccodes
SUBDIR += py-emmet-core
SUBDIR += py-esda
SUBDIR += py-fresnel
SUBDIR += py-gemmi
SUBDIR += py-geolinks
SUBDIR += py-geomet
SUBDIR += py-geometer
SUBDIR += py-geometric
SUBDIR += py-gpaw
SUBDIR += py-gsd
SUBDIR += py-h5json
SUBDIR += py-h5py
SUBDIR += py-h5pyd
SUBDIR += py-hiphive
SUBDIR += py-hoomd-blue
SUBDIR += py-inequality
SUBDIR += py-ipygany
SUBDIR += py-jupyter_jsmol
SUBDIR += py-kim-query
SUBDIR += py-kimpy
SUBDIR += py-kinematics
SUBDIR += py-kliff
SUBDIR += py-kpLib
SUBDIR += py-liac-arff
SUBDIR += py-libgetar
SUBDIR += py-libpysal
SUBDIR += py-lifelines
SUBDIR += py-mdp
SUBDIR += py-mercantile
SUBDIR += py-meshio
SUBDIR += py-mmcif
SUBDIR += py-mmtf-python
SUBDIR += py-molmod
SUBDIR += py-moltemplate
SUBDIR += py-mp-api
SUBDIR += py-mpcontribs-client
SUBDIR += py-mplhep
SUBDIR += py-mplhep-data
SUBDIR += py-mrchem
SUBDIR += py-ncrystal
SUBDIR += py-netCDF4
SUBDIR += py-netcdf-flattener
SUBDIR += py-nglview
SUBDIR += py-nibabel
SUBDIR += py-nilearn
SUBDIR += py-obspy
SUBDIR += py-oddt
SUBDIR += py-openEMS
SUBDIR += py-openbabel
SUBDIR += py-openpiv
SUBDIR += py-optking
SUBDIR += py-paida
SUBDIR += py-paramz
SUBDIR += py-penaltymodel
SUBDIR += py-periodictable
SUBDIR += py-phono3py
SUBDIR += py-phonopy
SUBDIR += py-pupynere
SUBDIR += py-py3Dmol
SUBDIR += py-pyaixi
SUBDIR += py-pyberny
SUBDIR += py-pycsw
SUBDIR += py-pydicom
SUBDIR += py-pygeodesy
SUBDIR += py-pygeometa
SUBDIR += py-pygmo2
SUBDIR += py-pyked
SUBDIR += py-pymatgen
SUBDIR += py-pymatgen-analysis-alloys
SUBDIR += py-pymbd
SUBDIR += py-pymol
SUBDIR += py-pyosf
SUBDIR += py-pyphot
SUBDIR += py-pyprecice
SUBDIR += py-pyqubo
SUBDIR += py-pysal
SUBDIR += py-pyscf
SUBDIR += py-pyteomics
SUBDIR += py-qcelemental
SUBDIR += py-qcengine
SUBDIR += py-qspin
SUBDIR += py-quantities
SUBDIR += py-rmf
SUBDIR += py-rmsd
SUBDIR += py-ruffus
SUBDIR += py-sarpy
SUBDIR += py-scikit-fuzzy
SUBDIR += py-scikit-learn
SUBDIR += py-scikit-optimize
SUBDIR += py-scikit-sparse
SUBDIR += py-scimath
SUBDIR += py-scipy
SUBDIR += py-scoria
SUBDIR += py-sdf
SUBDIR += py-segregation
SUBDIR += py-segyio
SUBDIR += py-signac
SUBDIR += py-sklearn-pandas
SUBDIR += py-skrebate
SUBDIR += py-spaghetti
SUBDIR += py-spglib
SUBDIR += py-symfc
SUBDIR += py-tensorflow
SUBDIR += py-thewalrus
SUBDIR += py-tobler
SUBDIR += py-trainstation
SUBDIR += py-trx-python
SUBDIR += py-tweedledum
SUBDIR += py-vedo
SUBDIR += py-veusz
SUBDIR += py-xbout
SUBDIR += pybrain
SUBDIR += pynn
SUBDIR += q
SUBDIR += qbox
SUBDIR += qcl
SUBDIR += qiskit-aer
SUBDIR += qmcpack
SUBDIR += qt6-quick3dphysics
SUBDIR += quantum-espresso
SUBDIR += quantum-espresso-pseudopotentials
SUBDIR += quantum-jet
SUBDIR += qwalk
SUBDIR += rdkit
SUBDIR += rmf
SUBDIR += rubygem-ai4r
SUBDIR += rubygem-cdo
SUBDIR += rubygem-rgeo
SUBDIR += rubygem-rgeo-geojson
SUBDIR += rubygem-rgeo-proj4
SUBDIR += rubygem-rgeo-shapefile
SUBDIR += rubygem-ruby-netcdf
SUBDIR += salome-configuration
SUBDIR += salome-kernel
SUBDIR += scidavis
SUBDIR += sciplot
SUBDIR += seacas
SUBDIR += segyio
SUBDIR += serac
SUBDIR += shelxle
SUBDIR += siconos
SUBDIR += siesta
SUBDIR += sigrok-cli
SUBDIR += sigrok-firmware
SUBDIR += sigrok-firmware-fx2lafw
SUBDIR += sigrok-firmware-utils
SUBDIR += silo
SUBDIR += simbody
SUBDIR += simgrid
SUBDIR += simint
SUBDIR += simlib
SUBDIR += simple-dftd3
SUBDIR += simsmith
SUBDIR += sirius
SUBDIR += smoldyn
SUBDIR += sparta
SUBDIR += spglib
SUBDIR += spheral
SUBDIR += step
SUBDIR += tblite
SUBDIR += teem
SUBDIR += tfel
SUBDIR += tfel-edf
SUBDIR += thermofun
SUBDIR += tinker
SUBDIR += trilinos
SUBDIR += ttk
SUBDIR += tweedledum
SUBDIR += udunits
SUBDIR += ukrmol+
SUBDIR += v_sim
SUBDIR += vipster
SUBDIR += vmd
SUBDIR += voro++
SUBDIR += votca
SUBDIR += wannier90
SUBDIR += wwplot
SUBDIR += wxmacmolplt
SUBDIR += xcfun
SUBDIR += xcrysden
SUBDIR += xdrawchem
SUBDIR += xtb
SUBDIR += yoda
SUBDIR += zotero
SUBDIR += zx
.include <bsd.port.subdir.mk>