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13 lines
590 B
Plaintext
13 lines
590 B
Plaintext
MAFFT offers a range of multiple alignment strategies, L-INS-i
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(accurate; recommended for <200 sequences), FFT-NS-i (standard speed and
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accuracy), FFT-NS-2 (fast; recommended for >2,000 sequences), etc.
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According to BAliBASE and other benchmark tests, L-INS-i is one of the
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most accurate methods currently available.
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MAFFT has been described:
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K. Katoh, K. Misawa, K. Kuma and T. Miyata (Nucleic Acids Res. 30:
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3059-3066, 2002) MAFFT: a novel method for rapid multiple sequence
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alignment based on fast Fourier transform.
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WWW: http://www.biophys.kyoto-u.ac.jp/~katoh/programs/align/mafft/
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