Ruslan Makhmatkhanov ba777286a4 biology/platon: fix fetching ... Add working mirror. Also update file size in distinfo - checksum is not changed and I dunno why. But with old file size it warns that expected size was different. PR: 204491 Submitted by: Walter Schwarzenfeld <w.litter@aon.at>		2015-11-19 20:13:00 +00:00
..
ariadne
artemis
avida	- Unbreak on PowerPC by using atomicops implementation for Linux and GCC	2015-09-02 12:29:09 +00:00
babel	Unbreak the build on PowerPC (at least) by always using va_copy() macro for	2015-09-02 10:10:06 +00:00
bcftools
biococoa	Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source.	2015-09-19 10:33:34 +00:00
biojava
blat
bwa	BWA is a program for aligning sequencing reads against a large reference	2015-09-25 18:39:36 +00:00
cd-hit	- Use compiler:openmp instead of gcc	2015-09-19 13:12:44 +00:00
cdbfasta	Fast indexing and retrieval of FASTA records from flat file data bases.	2015-09-25 18:37:24 +00:00
chemeq
clustalw
consed	Deprecate ports broken for more than 6 months	2015-10-25 19:35:28 +00:00
crux	Unbreak the build on PowerPC, it had nothing to do with "error in pthreads":	2015-09-02 09:23:05 +00:00
emboss
fasta	- Do not falsely advertise that PowerPC build runs out of space and fails	2015-09-02 10:35:25 +00:00
fasta3	- Update to 36.3.8	2015-10-16 13:31:10 +00:00
fastdnaml
fastool	Simple and quick FastQ and FastA tool for file reading and conversion.	2015-09-25 18:35:14 +00:00
fasttree	FastTree infers approximately-maximum-likelihood phylogenetic trees from	2015-09-25 18:34:29 +00:00
fastx-toolkit	The FASTX-Toolkit is a collection of command line tools for Short-Reads	2015-09-25 18:33:18 +00:00
fluctuate	- Switch to options helpers	2015-11-19 00:51:15 +00:00
garlic
gff2ps	Fix ports that confused the meaning of WRKDIR and WRKSRC.	2015-11-05 12:36:25 +00:00
gmap	- Update to 2015.09.21	2015-10-27 18:49:48 +00:00
gperiodic
grappa	biology/grappa: define license (GPLv2)	2015-09-25 18:55:08 +00:00
hmmer
htslib
iolib	- Update to 1.14.6	2015-11-09 16:02:13 +00:00
jalview
lagan
lamarc	Remove ansi version fo wxGTK 2.8 and only keep the unicode version	2015-09-16 19:51:26 +00:00
libgtextutils	Gordon's text utilities.	2015-09-25 18:31:28 +00:00
libsbml	- Add LICENSE_FILE	2015-10-14 23:51:20 +00:00
linux-foldingathome
mafft
mapm3
migrate
molden
mopac
mrbayes
mummer
muscle
ncbi-blast+
ncbi-toolkit
njplot	Deprecate ports broken for more than 6 months	2015-10-25 19:35:28 +00:00
ortep3	Deprecate ports broken for more than 6 months	2015-10-25 19:35:28 +00:00
p5-AcePerl	Make it so that the default Perl is always called perl5.	2015-09-14 12:19:48 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3	Make it so that the default Perl is always called perl5.	2015-09-14 12:19:48 +00:00
p5-Bio-Glite
p5-Bio-Graphics	Make it so that the default Perl is always called perl5.	2015-09-14 12:19:48 +00:00
p5-Bio-MAGETAB
p5-Bio-NEXUS	Make it so that the default Perl is always called perl5.	2015-09-14 12:19:48 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl	Make it so that the default Perl is always called perl5.	2015-09-14 12:19:48 +00:00
p5-bioperl-run
paml
phrap
phred
phylip
phyml
platon	biology/platon: fix fetching	2015-11-19 20:13:00 +00:00
plink
plinkseq
povchem	Deprecate ports broken for more than 6 months	2015-10-25 19:35:28 +00:00
primer3
protomol
psi88
py-biopython
pycogent
pyfasta
python-nexus
recombine
ruby-bio	- Fix typo	2015-10-10 23:15:16 +00:00
samtools
seaview	biology/seaview: Broken, Does not fetch (checksum mismatch)	2015-11-02 08:14:30 +00:00
seqan
seqio
seqtools	biology/seqtools: Fix distinfo, WWW	2015-11-18 10:53:48 +00:00
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx	- Pet portlint	2015-10-14 23:50:11 +00:00
tRNAscan-SE
ugene
velvet
wise
xmolwt	Fix previous commit.	2015-08-19 13:41:51 +00:00
Makefile	BWA is a program for aligning sequencing reads against a large reference	2015-09-25 18:39:36 +00:00