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freebsd-ports/biology
History
Maho Nakata 602b708bfb * Add dummy knob WANT_FORTRAN for future gfortran 
migration. currently it is not buildable with gfrotran42.
* Honor FC and FFLAGS.
2007-01-09 02:37:43 +00:00
..
adun
- Local/Tools/Resources now global
2006-12-09 09:40:38 +00:00
ariadne
…
artemis
…
avida
…
babel
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belvu
Distfile now checksums successfully.
2006-10-14 16:13:49 +00:00
biococoa
The BioCocoa framework provides developers with the opportunity to add
2006-12-30 09:20:54 +00:00
biojava
Reset whitekid@gmail.com after timeouts and no response to email.
2006-12-13 12:56:01 +00:00
blast
…
blat
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boinc-simap
- Add hmmer 5.09 application
2006-10-10 11:31:42 +00:00
chemeq
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clustalw
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coalesce
- Deprecate
2006-12-10 12:37:38 +00:00
crimap
Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
2006-12-26 12:46:34 +00:00
distribfold
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dna-qc
Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
2006-12-26 12:46:34 +00:00
dotter
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embassy
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emboss
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fasta
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fasta3
- Update to 34.t26.b3
2006-10-31 09:02:04 +00:00
fastdnaml
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finchtv
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fluctuate
- Deprecate
2006-12-10 12:37:38 +00:00
garlic
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genpak
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gff2ps
- Update to 0.98d
2006-10-06 04:12:59 +00:00
gmap
Add gmap 2006.04.21, a Genomic Mapping and Alignment Program for mRNA
2006-09-29 04:05:55 +00:00
gperiodic
Chase the GNOME X11BASE to LOCALBASE move, and fix the build with the
2006-10-14 08:54:54 +00:00
grappa
Reset dbader@ece.unm.edu due to timeouts and no response to email.
2006-12-13 13:20:20 +00:00
hmmer
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jalview
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kinemage
- Respect X11BASE
2006-11-27 22:03:22 +00:00
L-Breeder
- Use features of bsd.wx.mk, especially USE_WX
2006-12-01 07:39:02 +00:00
lagan
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lamarc
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libgenome
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linux-foldingathome
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lsysexp
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mafft
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migrate
- Update to 2.1.3
2006-12-10 12:39:32 +00:00
molden
Migrated to gfortran.
2007-01-09 01:47:06 +00:00
mopac
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nab
- Update to 5.1.2
2006-12-23 21:45:17 +00:00
ncbi-toolkit
- Respect X11BASE
2006-12-09 07:49:55 +00:00
ortep3
migrated to gfortran.
2007-01-09 01:48:41 +00:00
p5-AcePerl
- Mark broken on amd64 < 6. We got following
2006-12-04 04:13:30 +00:00
p5-Bio-ASN1-EntrezGene
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p5-Bio-Das
- Update to 1.03
2006-12-19 06:47:45 +00:00
p5-Bio-Phylo
Update to v0.15
2006-12-27 18:58:26 +00:00
p5-bioperl
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p5-bioperl-devel
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p5-bioperl-run
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p5-bioperl-run-devel
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paml
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phylip
Reset dbader@ece.unm.edu due to timeouts and no response to email.
2006-12-13 13:20:20 +00:00
platon
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povchem
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primer3
- Update to 1.0.1
2006-12-29 23:40:53 +00:00
protomol
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psi88
* Add dummy knob WANT_FORTRAN for future gfortran
2007-01-09 02:37:43 +00:00
py-biopython
- Update to 1.42
2006-10-31 13:25:21 +00:00
pymol
Fix build on amd64
2006-09-17 11:51:56 +00:00
rasmol
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recombine
- Deprecate
2006-12-10 12:37:38 +00:00
ruby-bio
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seaview
Chase pdf library and bump PORTREVISION.
2006-10-09 08:18:35 +00:00
seqio
Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
2006-12-26 12:46:34 +00:00
sim4
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t_coffee
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tinker
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treepuzzle
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treeviewx
- Allow wxWidgets 2.6 alongside 2.4, this port works with both
2006-10-09 07:16:37 +00:00
tRNAscan-SE
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wise
Reset tonymaher@optusnet.com.au due to maintainer-timeouts and no response
2006-12-26 12:46:34 +00:00
xdrawchem
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xmolwt
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Makefile
The BioCocoa framework provides developers with the opportunity to add
2006-12-30 09:20:54 +00:00