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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-04 01:48:54 +00:00
freebsd-ports/biology
Danilo Egea Gondolfo 09e9fc3c2f - Update to 1.14.2
2015-09-17 12:54:47 +00:00
..
ariadne
artemis
avida - Unbreak on PowerPC by using atomicops implementation for Linux and GCC 2015-09-02 12:29:09 +00:00
babel Unbreak the build on PowerPC (at least) by always using va_copy() macro for 2015-09-02 10:10:06 +00:00
bcftools
biococoa
biojava
blat
chemeq
clustalw
consed
crux Unbreak the build on PowerPC, it had nothing to do with "error in pthreads": 2015-09-02 09:23:05 +00:00
emboss
fasta - Do not falsely advertise that PowerPC build runs out of space and fails 2015-09-02 10:35:25 +00:00
fasta3
fastdnaml
fluctuate
garlic
gff2ps Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
gmap
gperiodic
grappa
hmmer
htslib
iolib - Update to 1.14.2 2015-09-17 12:54:47 +00:00
jalview
lagan
lamarc Remove ansi version fo wxGTK 2.8 and only keep the unicode version 2015-09-16 19:51:26 +00:00
libsbml Switch to USES=iconv:build. 2015-08-25 13:15:17 +00:00
linux-foldingathome
mafft
mapm3
migrate
molden
mopac
mrbayes
mummer Fix build on mips by properly respecting compiler and flags 2015-08-05 12:18:41 +00:00
muscle
ncbi-blast+
ncbi-toolkit
njplot
ortep3 Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
p5-AcePerl Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3 Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Bio-Glite
p5-Bio-Graphics Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Bio-MAGETAB
p5-Bio-NEXUS Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-bioperl-run
paml
phrap
phred
phylip Unbreak 2015-07-28 17:52:11 +00:00
phyml
platon Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
plink
plinkseq
povchem
primer3
protomol Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
psi88
py-biopython Update to 1.65. 2015-08-05 10:32:31 +00:00
pycogent
pyfasta
python-nexus
recombine
ruby-bio - Add LICENSE 2015-09-03 16:23:37 +00:00
samtools
seaview biology/seaview: Update version 4.5.4.4=>4.5.4.6 2015-09-15 14:44:47 +00:00
seqan
seqio
seqtools biology/seqtools: 4.35 -> 4.36 2015-08-08 11:22:24 +00:00
sim4
ssaha
t_coffee
tinker Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
treepuzzle
treeviewx Remove ansi version fo wxGTK 2.8 and only keep the unicode version 2015-09-16 19:51:26 +00:00
tRNAscan-SE
ugene biology/ugene: qt4-linguist -> qt4-linguisttools 2015-08-18 20:02:45 +00:00
velvet
wise
xmolwt Fix previous commit. 2015-08-19 13:41:51 +00:00
Makefile