Marcus von Appen 49cb3686eb - Convert USE_PYTHON -> USES leftovers missed in the previous commits ... Spotted by: antoine With hat: python		2015-01-04 08:23:23 +00:00
..
ariadne	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
artemis	Cleanup plist	2014-10-20 07:10:48 +00:00
avida	Cleanup plist	2014-12-20 17:27:08 +00:00
babel	Rename biology/ patch-xy patches to reflect the files they modify.	2014-07-28 14:22:16 +00:00
biococoa	Cleanup plist	2014-10-20 07:10:48 +00:00
biojava	- add stage support	2014-06-01 10:37:22 +00:00
blat	Update to upstream version 36	2015-01-01 18:17:53 +00:00
chemeq
clustalw	Multiple ports: reset maintainers	2014-05-26 02:33:38 +00:00
consed	update ports:	2014-08-23 18:04:58 +00:00
crux	Cleanup plist	2014-10-20 07:10:48 +00:00
emboss	Bump portrevision after png update	2014-12-25 20:54:41 +00:00
fasta
fasta3	Cleanup plist	2014-10-20 07:10:48 +00:00
fastdnaml	Cleanup plist	2014-10-20 07:10:48 +00:00
fluctuate
garlic	Cleanup plist	2014-10-20 07:10:48 +00:00
gff2ps
gmap	Fix MASTER_SITES	2014-09-05 09:25:45 +00:00
gperiodic
grappa
hmmer	Cleanup plist	2014-10-20 07:10:48 +00:00
htslib	HTSlib is an implementation of a unified C library for accessing common file	2014-12-14 22:35:07 +00:00
iolib	Cleanup plist	2014-10-20 07:10:48 +00:00
jalview	Cleanup plist	2014-10-20 07:10:48 +00:00
lagan
lamarc
libsbml	- Convert USE_PYTHON -> USES leftovers missed in the previous commits	2015-01-04 08:23:23 +00:00
linux-foldingathome	Cleanup plist	2014-12-20 17:27:08 +00:00
mafft	Cleanup plist	2014-10-20 07:10:48 +00:00
mapm3
migrate	- Update to 3.6.5	2014-12-06 14:54:48 +00:00
molden	Update the default version of GCC in the Ports Collection from GCC 4.7.4	2014-09-10 20:50:31 +00:00
mopac	- Upadate biology/mopac to version 1.15	2014-12-16 22:10:23 +00:00
mrbayes	Fix build on -current by un-clobbering LDFLAGS. Also, don't	2014-08-15 16:37:37 +00:00
mummer	Cleanup plist	2014-10-20 07:10:48 +00:00
muscle	Update to 3.8.31.	2014-06-17 21:36:06 +00:00
ncbi-blast+	Fix PKGNAMEPREFIX of biology/ncbi-blast+, so that the resulting package is	2014-12-31 00:31:55 +00:00
ncbi-toolkit	Cleanup plist	2014-10-20 07:10:48 +00:00
njplot	- add stage support	2014-06-01 11:26:39 +00:00
ortep3	Update the default version of GCC in the Ports Collection from GCC 4.7.4	2014-09-10 20:50:31 +00:00
p5-AcePerl	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-ASN1-EntrezGene	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-Das	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-Das-Lite	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-GFF3	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-Glite	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-Graphics	- Update to 2.39	2014-12-07 07:44:06 +00:00
p5-Bio-MAGETAB	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-NEXUS	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-Bio-Phylo	- Update to 0.58	2014-12-07 04:41:47 +00:00
p5-Bio-SCF	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-bioperl	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
p5-bioperl-run	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
paml	Cleanup plist	2014-10-20 07:10:48 +00:00
phrap	- Fix various distinfo errors	2014-10-16 08:55:30 +00:00
phred	update ports:	2014-08-23 18:04:58 +00:00
phylip	- Update to version 3.696	2014-11-02 14:13:59 +00:00
phyml	Convert to USES=autoreconf	2014-12-28 19:14:13 +00:00
platon	Cleanup plist	2014-10-20 07:10:48 +00:00
plink	Update the default version of GCC in the Ports Collection from GCC 4.7.4	2014-09-10 20:50:31 +00:00
plinkseq	- Update to 0.10	2014-10-12 03:16:10 +00:00
povchem	Cleanup plist	2014-12-20 17:27:08 +00:00
primer3	Quote ${CC} and similar variables in MAKE_ARGS.	2014-05-20 19:32:39 +00:00
protomol	Bump portrevision after png update	2014-12-25 20:54:41 +00:00
psi88	Update the default version of GCC in the Ports Collection from GCC 4.7.4	2014-09-10 20:50:31 +00:00
py-biopython	- Convert ports from benchmarks/ and biology/ to new USES=python	2014-10-19 07:38:11 +00:00
pycogent	- Convert ports from benchmarks/ and biology/ to new USES=python	2014-10-19 07:38:11 +00:00
pyfasta	- Convert ports from benchmarks/ and biology/ to new USES=python	2014-10-19 07:38:11 +00:00
python-nexus	- Convert ports from benchmarks/ and biology/ to new USES=python	2014-10-19 07:38:11 +00:00
recombine
ruby-bio	Cleanup plist	2014-10-20 07:10:48 +00:00
samtools	Samtools implements various utilities for post-processing alignments in the	2014-12-15 21:59:19 +00:00
seaview	Change my non-FreeBSD MAINTAINER mail to bofh@	2014-12-24 00:14:11 +00:00
seqan	Cleanup plist	2014-10-20 07:10:48 +00:00
seqio
seqtools	biology/seqtools: 4.30 -> 4.31	2014-12-13 18:10:31 +00:00
sim4
ssaha	Cleanup plist	2014-12-20 17:27:08 +00:00
t_coffee	Update the default version of GCC in the Ports Collection from GCC 4.7.4	2014-09-10 20:50:31 +00:00
tinker	Cleanup plist	2014-10-20 07:10:48 +00:00
treepuzzle
treeviewx	Update the default version of GCC in the Ports Collection from GCC 4.7.4	2014-09-10 20:50:31 +00:00
tRNAscan-SE	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
ugene	Update to version 1.15.0.	2014-12-03 01:40:54 +00:00
velvet	Change the way Perl modules are installed, update the default Perl to 5.18.	2014-11-26 13:08:24 +00:00
wise	Cleanup plist	2014-12-20 17:27:08 +00:00
xmolwt	devel/glib12 x11-toolkits/gtk12:	2014-09-13 15:11:27 +00:00
Makefile	Remove expired ports:	2015-01-01 01:13:11 +00:00