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42 lines
1.0 KiB
Makefile
42 lines
1.0 KiB
Makefile
# Created by: Fernan Aguero <fernan@iib.unsam.edu.ar>
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# $FreeBSD$
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PORTNAME= ssaha
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PORTVERSION= 3.1c
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PORTREVISION= 2
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CATEGORIES= biology
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MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha/
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DISTNAME= ${PORTNAME}_v${PORTVERSION:S/.//}
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MAINTAINER= ports@FreeBSD.org
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COMMENT= Very fast matching and alignment of DNA sequences
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NO_WRKSUBDIR= yes
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BUILD_WRKSRC= ${WRKSRC}/Binary
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USES= gmake
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USE_GCC= any
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MAKE_ENV= CCC="${CXX}" OPTIM="${CXXFLAGS}" THREAD_LIB="-pthread"
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MAKEFILE= makefile
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ALL_TARGET= ssaha
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PLIST_FILES= bin/ssaha %%DATADIR%%/testSSAHA.csh \
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${DATA_FILES:S,^,%%DATADIR%%/,}
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PLIST_DIRS= %%DATADIR%%
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DATA_FILES= test.fasta test_extract.fasta test_filter.fail \
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test_filter.fastq test_protein.fasta README
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do-install:
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(cd ${BUILD_WRKSRC} && ${INSTALL_PROGRAM} ssaha \
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${STAGEDIR}${PREFIX}/bin)
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@${MKDIR} ${STAGEDIR}${DATADIR}
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(cd ${BUILD_WRKSRC} && ${INSTALL_SCRIPT} testSSAHA.csh \
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${STAGEDIR}${DATADIR})
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.for i in ${DATA_FILES}
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(cd ${BUILD_WRKSRC} && ${INSTALL_DATA} ${i} \
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${STAGEDIR}${DATADIR})
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.endfor
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.include <bsd.port.mk>
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