1
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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-21 00:25:50 +00:00
freebsd-ports/science
2024-11-20 13:05:25 +03:00
..
2d-rewriter
abinit science/abinit: update 10.0.7 → 10.0.9 2024-09-13 01:24:49 -07:00
afni science/afni: update to 24.3.06 2024-11-19 19:46:59 +01:00
agrum science/agrum: update 1.17.0 → 1.17.1 2024-11-08 09:21:06 -08:00
aircraft-datcom
ALPSCore devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
antioch
apbs
arbor science/arbor: Broken on 15 with clang-15; Update WWW 2024-11-03 19:50:58 -08:00
ascent science/ascent: Broken on 15 with clang-19; Update WWW 2024-11-13 08:42:20 -08:00
atompaw
avogadro2
avogadrolibs
axom
bagel devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
bddsolve devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
berkeleygw */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
bodr
bout++ science/bout++: update 4.4.2 → 5.1.1 2024-09-19 14:05:26 -07:00
bout++-merging-filaments science/bout++-merging-filaments: Broken 2024-10-06 11:31:38 -07:00
buddy
cantera science/cantera: update 3.0.0 → 3.0.1 2024-09-16 22:25:01 -07:00
cardioid science/cardioid: Fix build on 15 with clang-19 2024-11-03 12:09:30 -08:00
cdf
cdk */*: properly depend on Maven package 2024-03-11 10:09:45 +01:00
cdo science/cdo: Cosmetic change 2024-10-21 17:17:27 +08:00
cgnslib all: drop support for expired FreeBSD 14.0 2024-10-01 20:56:20 +02:00
cgribex science/cgribex: Remove GRIB_API option after grib_api deprecation 2024-10-21 17:17:27 +08:00
checkmol */*: Pass to fpc based ports control of ONLY_FOR_ARCHS 2024-09-18 01:22:50 -07:00
chemical-mime-data
chemicalfun */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
chemps2 */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
chemtool science/chemtool: Move man pages to share/man 2024-03-21 12:34:32 +00:00
chemtool-devel */*: Remove GNU_CONFIGURE_MANPREFIX after move man pages to share/man 2024-04-14 10:41:16 +01:00
chimes-calculator
ChipmunkPhysics
chrono science/chrono: update 8.0.0 → 9.0.1 2024-11-10 12:13:33 -08:00
cif-tools devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
clhep
clipper
code_saturne */*: Chase removal of sip from RUN_DEPENDS 2024-10-19 03:33:57 -04:00
colt
conduit science/conduit: update 0.8.8 → 0.9.1 2024-04-05 02:15:39 -07:00
coordgenlibs
cp2k */*: Cosmetic changes 2024-09-10 21:09:33 -07:00
cp2k-data science/cp2k{,-data}: update 2024.2 → 2024.3 2024-09-10 19:45:59 -07:00
csvtk science/csvtk: Update to 0.31.0 2024-11-03 06:19:10 -06:00
dakota science/dakota: mark as BROKEN, fails to build with boost-1.85+ 2024-10-03 13:25:02 +03:00
dalton */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
dd_package
devisor
dftbplus textproc/toml-f: update 0.3.1 → 0.4.2 2024-11-19 01:29:08 -08:00
dftd3
dftd4 science/{,py-}dftd4: update 3.6.0 → 3.7.0 2024-08-31 00:16:14 -07:00
dimod science/{,py-}dimod: update 0.12.17 → 0.12.18 2024-11-13 22:33:16 -08:00
dirac science/dirac: Broken on i386 2024-04-27 00:53:00 -07:00
dkh
dlib-cpp science/dlib-cpp: fix build with libc++ 19 2024-11-10 13:08:40 +01:00
drawxtl
dssp devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
dvc science/dvc: Fix run-depends 2024-11-09 20:35:33 -08:00
dwave-preprocessing
dynare */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
eccodes science/eccodes: Update to 2.38.3 2024-10-21 17:17:29 +08:00
elk science/elk: update 10.0.15 → 10.1.12 2024-10-07 02:42:12 -07:00
elmerfem */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
epte
erd
ergo
erkale */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
erkale-pseudopotentials
fastcap
fasthenry
fastjet science/fastjet: Fix build on 15; Update WWW 2024-11-03 12:09:28 -08:00
feff10
fleur science/fleur: update 6.2 → 7.2 2024-11-08 13:40:35 -08:00
frontistr */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
gchemutils science/gchemutils: Moved man to share/man 2024-02-25 13:54:37 +01:00
gcp science/gcp: update 2.3.1 → 2.3.2 2024-09-09 12:09:43 -07:00
gdma
geant4 science/geant4: Fix build error 2024-11-19 08:27:12 +00:00
gemmi science/{,py-}gemmi: update 0.6.6 → 0.6.7 2024-09-06 23:24:52 -07:00
getdp science/getdp: Updat to 3.6.0. 2024-03-11 14:32:08 -05:00
ghemical
ghmm all: drop support for expired FreeBSD 14.0 2024-10-01 20:56:20 +02:00
gnudatalanguage graphics/proj: Update to 9.4.1 2024-08-28 08:54:30 +02:00
gpaw-setups
gramps science/gramps: Update to 5.2.3 2024-07-15 20:19:04 +01:00
grib_api science/grib_api: Mark DEPRECATED and set EXPIRATION_DATE to 2024-11-30 2024-10-21 17:17:41 +08:00
gromacs science/gromacs: update 2024.3 → 2024.4 2024-11-02 22:25:54 -07:00
gsmc science/gsmc: Moved man to share/man 2024-02-25 13:54:38 +01:00
gtamsanalyzer all: drop support for expired FreeBSD 14.0 2024-10-01 20:56:20 +02:00
h5utils science/h5utils: Drop USES=autoreconf 2024-04-14 13:03:19 +01:00
h5z-zfp
harminv science/harminv: update 1.3.1 → 1.4.2; add shared libraries 2024-10-11 09:45:56 -07:00
hdf science/hdf: update 4.2.15 → 4.3.0; add JAVA option 2024-09-24 00:52:09 -07:00
hdf5 science/hdf5: Update WWW 2024-03-23 22:30:46 +08:00
hdf5-18 */*: Remove incorrect libtool dependency 2024-05-26 12:52:26 +02:00
hdf5-110 science/hdf5-110: Update to 1.10.11 2024-06-19 03:52:57 +08:00
healpix
helfem math/armadillo: Update to 14.0.0 2024-07-07 00:01:50 +08:00
hepmc3 science/hepmc3: update 3.2.7 → 3.3.0 2024-06-20 18:52:59 -07:00
highfive science/highfive: update 2.9.0 → 2.10.0 2024-07-29 22:16:24 -07:00
hypre science/hypre: update 2.31.0 → 2.32.0 2024-10-09 02:41:59 -07:00
iboview */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
InsightToolkit science/InsightToolkit: Fix build with CMake 3.29 2024-05-07 05:05:20 -04:00
InsightToolkit501 science/InsightToolkit501: Fix build om i386 2024-06-02 13:43:43 -07:00
isaac-cfd
jdftx
jmol
jstrack
kalzium KDE: Update KDE Gear to 23.08.5 2024-02-16 20:31:32 +01:00
kim-api
kplib science/kplib: Fix build by removing -Werror promoting a warrning to an error 2024-04-11 01:17:15 -07:00
kst2 science/kst2: update to 2.1 2024-10-31 13:26:54 +03:00
lammps devel/kokkos: update 4.3.01 → 4.4.00 2024-08-19 12:11:44 -07:00
lamprop
latte */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
libaec science/libaec: Remove CMAKE_TESTING_ON 2024-10-07 22:16:42 +08:00
libccp4
libcifpp devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
libcint */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
libctl */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
libecpint
libefp
libgetar science/{,py-}libgetar: update 1.1.5 → 1.1.7 2024-07-16 17:42:46 -07:00
libghemical
libgridxc
libint
libint2 devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
libint2-psi4 devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
libkml devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
liblinear
libmbd */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
libmsym
libnegf */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
liboglappth
libpsml science/libpsml: New port: Library to handle pseudopotentials in PSML format 2024-09-02 00:54:42 -07:00
libquantum
libssm
libsvm */*: Reset MAINTAINER for freqlabs ports due to fatal email bounces for multiple months 2024-11-12 09:44:30 -05:00
libsvm-python
libvdwxc
libxc science/libxc: update 6.0.0 → 6.2.2 2024-04-04 01:05:02 -07:00
liggghts graphics/tiff: Update to 4.6.0 2024-04-27 14:44:59 +02:00
linearelasticity science/linearelasticity: new port, Elas, a solver for linear elasticity 2024-06-23 14:58:40 +02:00
linux-zotero
luscus
m-aneos
madness
maeparser devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
massxpert
mbdyn */*: chase SuiteSparse’s upgrade 2024-04-29 22:08:56 +02:00
mcpl
mcstas
mcstas-comps
mctc-lib science/mctc-lib: update 0.3.1 → 0.3.2 2024-08-31 00:16:14 -07:00
mcxtrace science/mcxtrace: Moved man to share/man 2024-02-25 13:54:42 +01:00
mcxtrace-comps
mdynamix
medit
meep science/harminv: update 1.3.1 → 1.4.2; add shared libraries 2024-10-11 09:45:56 -07:00
metaphysicl
minc2 science/minc2: Moved man to share/man 2024-02-25 13:54:43 +01:00
mmdb2
mmg science/mmg: Improve port 2024-06-30 09:40:20 +02:00
mmtf-cpp
mol2ps */*: Pass to fpc based ports control of ONLY_FOR_ARCHS 2024-09-18 01:22:50 -07:00
molgif all: Bump after lang/go121 update 2024-08-09 06:24:08 +00:00
molscript all: drop support for expired FreeBSD 14.0 2024-10-01 20:56:20 +02:00
molsketch
mopac science/mopac: update 23.0.1 → 23.0.2 2024-11-19 01:29:09 -08:00
mp2d
mpb */*: Bump PORTVERSION of math/nlopt consumers 2024-08-25 15:33:16 +02:00
mpqc science/mpqc: Move manpages to share/man 2024-03-25 21:41:04 +03:00
mrchem
mrcpp
msms
mstore science/mstore: update 0.2.0 → 0.3.0 2024-06-14 02:11:34 -07:00
multicharge science/multicharge: update 0.2.0 → 0.3.0 2024-08-31 00:16:13 -07:00
multiwfn */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
mutationpp
namd
ncrystal science/{,py-}ncrystal: update 3.9.6 → 3.9.7 2024-09-25 01:33:35 -07:00
nest devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
netcdf */*: Remove GNU_CONFIGURE_MANPREFIX=${PREFIX}/share after 9fd7ee1cdf 2024-04-13 21:03:19 +08:00
netcdf-cxx science/netcdf-cxx: Cosmetic change 2024-11-15 18:17:06 +08:00
netcdf-fortran science/netcdf-fortran: Cosmetic change 2024-11-15 18:17:06 +08:00
nifticlib
nlcglib science/nlcglib: update 1.0b-20230622 → 1.1.0 2024-08-19 12:11:36 -07:00
nwchem science/nwchem: Use proper tarball 2024-09-04 15:11:18 -07:00
nwchem-data science/nwchem{,-data}: update 7.2.2 → 7.2.3 2024-08-30 17:04:48 -07:00
ocean */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
octopus science/octopus: builds fine on aarch64 2024-10-30 10:00:37 +01:00
openbabel devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
openems devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
openkim-models
openmc science/openmc: Broken on 15 with clang-19; Update WWW 2024-11-04 12:36:50 -08:00
openmodelica science/openmodelica: mark as BROKEN, fails to build with boost-1.86+ 2024-11-20 13:05:22 +03:00
openmolcas science/openmolcas: Fix build with gcc14 2024-09-05 14:04:30 -07:00
openmx science/openmx: update 3.8.5 → 3.9.9 2024-06-16 18:20:36 -07:00
opensim-core science/opensim-core: Use swig40 instead of swig 2024-07-14 04:19:04 +08:00
opensph science/opensph: port to aarch64 2024-10-21 11:36:01 +02:00
opsin */*: properly depend on Maven package 2024-03-11 10:09:45 +01:00
optench
orthanc science/orthanc*: mark as BROKEN, fails to build with boost-1.86+ 2024-11-20 13:05:19 +03:00
orthanc-dicomweb science/orthanc*: mark as BROKEN, fails to build with boost-1.86+ 2024-11-20 13:05:19 +03:00
orthanc-mysql science/orthanc*: mark as BROKEN, fails to build with boost-1.86+ 2024-11-20 13:05:19 +03:00
orthanc-postgresql science/orthanc*: mark as BROKEN, fails to build with boost-1.86+ 2024-11-20 13:05:19 +03:00
orthanc-webviewer science/orthanc*: mark as BROKEN, fails to build with boost-1.86+ 2024-11-20 13:05:19 +03:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS science/p5-Geo-WebService-Elevation-USGS: Update to 0.200 2024-07-07 00:11:39 +08:00
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit science/p5-Physics-Unit: Update to 0.60 2024-11-03 21:23:29 +08:00
packmol
pagmo2 devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
paje all: drop support for expired FreeBSD 14.0 2024-10-01 20:56:20 +02:00
paraview devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
parthenon science/parthenon: Use external kokkos instead of the bundled one 2024-09-09 08:42:54 -07:00
pastix */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
pcmsolver science/pcmsolver: Broken on 15 with clang-19 2024-11-02 21:44:18 -07:00
PETSc science/PETSc: update 3.22.0 → 3.22.1 2024-10-29 23:29:18 -07:00
phonopy science/{,py-}phonopy: update 2.28.0 → 2.30.1 2024-11-15 01:20:26 -08:00
plumed
pnetcdf */*: Remove GNU_CONFIGURE_MANPREFIX=${PREFIX}/share after 9fd7ee1cdf 2024-04-13 21:03:19 +08:00
polytope
precice devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
psi4 */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
pulseview devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
py-abipy science/py-abipy: update 0.9.6 → 0.9.8 2024-09-16 00:48:27 -07:00
py-access graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-arbor science/py-arbor: Fix build by adding missing gmake dependency 2024-09-06 08:58:31 -07:00
py-arch devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-asap3
py-asdf filesystems: add new category for file systems and related utilities 2024-11-06 16:17:35 +01:00
py-asdf-standard science/py-asdf-standard: Update to 1.1.1 2024-03-23 22:49:29 +08:00
py-asdf-transform-schemas science/py-asdf-transform-schemas: Update to 0.5.0 2024-03-23 22:49:30 +08:00
py-ase science/py-ase: update 3.22.1 → 3.23.0 2024-07-12 22:17:49 -07:00
py-atomium security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-avogadrolibs
py-boutdata devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-boututils devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-cdo science/py-cdo: Update WWW and clean up pkg-descr 2024-07-19 00:46:26 +08:00
py-cfgrib science/py-cfgrib: Update to 0.9.14.1 2024-09-25 12:22:36 +08:00
py-chainer devel/protobuf: Update to 28.3 2024-10-29 22:38:30 +08:00
py-chainer-chemistry
py-chempy security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-cirq-aqt science/py-cirq-aqt: update 1.3.0 → 1.4.1 2024-08-20 10:51:33 -07:00
py-cirq-core science/py-cirq-core: update 1.3.0 → 1.4.1 2024-08-20 10:51:34 -07:00
py-cirq-google science/py-cirq-google: update 1.3.0 → 1.4.1 2024-08-20 10:51:34 -07:00
py-cirq-ionq science/py-cirq-ionq: update 1.3.0 → 1.4.1 2024-08-20 10:51:34 -07:00
py-cirq-pasqal science/py-cirq-pasqal: update 1.3.0 → 1.4.1 2024-08-20 10:51:33 -07:00
py-cirq-rigetti science/py-cirq-rigetti: update 1.3.0 → 1.4.1 2024-08-20 10:51:35 -07:00
py-coards science/py-coards: Convert to USE_PYTHON=pep517 2024-05-13 22:06:41 +08:00
py-DendroPy science/py-DendroPy: Update to 5.0.1 2024-06-03 07:29:16 +00:00
py-dftbplus science/{,py-}dftbplus: update 23.1 → 24.1 2024-05-28 01:12:11 -07:00
py-dftd4 science/{,py-}dftd4: update 3.6.0 → 3.7.0 2024-08-31 00:16:14 -07:00
py-dimod science/{,py-}dimod: update 0.12.17 → 0.12.18 2024-11-13 22:33:16 -08:00
py-dipy science/py-dipy: update 1.8.0 → 1.9.0 2024-04-22 01:25:11 -07:00
py-dlib science/py-dlib: fix build with libc++ 19 2024-11-04 08:37:27 +01:00
py-dwave-cloud-client science/py-dwave-cloud-client: update 0.11.3 → 0.12.0 2024-07-14 20:00:20 -07:00
py-dwave-greedy
py-dwave-hybrid science/py-dwave-hybrid: update 0.6.10 → 0.6.11 2024-03-04 15:19:09 -08:00
py-dwave-inspector science/py-dwave-inspector: update 0.5.0.post0 → 0.5.1 2024-08-31 00:16:16 -07:00
py-dwave-neal
py-dwave-networkx science/py-dwave-networkx: update 0.8.14 → 0.8.15 2024-06-15 02:12:44 -07:00
py-dwave-ocean-sdk science/py-dwave-ocean-sdk: update 6.8.0 → 6.9.0 2024-03-04 15:19:10 -08:00
py-dwave-optimization science/py-dwave-optimization: Add USE_PYTHON=pep517 2024-07-15 09:33:30 -07:00
py-dwave-preprocessing science/py-dwave-preprocessing: update 0.6.5 → 0.6.6 2024-07-14 20:00:19 -07:00
py-dwave-samplers science/py-dwave-samplers: update 1.2.0 → 1.3.0 2024-07-14 20:00:19 -07:00
py-dwave-system science/py-dwave-system: update 1.23.0 → 1.25.0 2024-07-15 00:19:27 -07:00
py-dwave-tabu
py-dwavebinarycsp
py-earthpy graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-eccodes science/py-eccodes: Update to 2.38.3 2024-10-21 17:17:29 +08:00
py-emmet-core science/py-emmet-core: Add NO_ARCH 2024-03-10 03:10:04 +08:00
py-esda devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-fresnel devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
py-gemmi science/{,py-}gemmi: update 0.6.6 → 0.6.7 2024-09-06 23:24:52 -07:00
py-geolinks science/py-geolinks: Convert to USE_PYTHON=pep517 2024-05-13 22:06:44 +08:00
py-geomet
py-geometer science/py-geometer: Convert to USE_PYTHON=pep517 2024-05-13 22:06:46 +08:00
py-geometric
py-gpaw science/py-gpaw: update 22.1.0 → 24.6.0 2024-11-13 22:33:12 -08:00
py-GPy science/py-GPy: update 1.13.1 → 1.13.2 2024-08-20 01:42:35 -07:00
py-GPyOpt
py-gsd science/py-gsd: update 3.3.2 → 3.4.1 2024-10-23 02:44:45 -07:00
py-h5json
py-h5py science/py-h5py: Update to 3.12.1 2024-10-14 13:25:44 +08:00
py-h5pyd science/py-h5pyd: New port: h5py compatible client lib for HDF REST API 2024-04-07 11:37:59 -07:00
py-HepMC3 science/py-HepMC3: Broken on armv7; Update WWW 2024-11-16 21:27:48 -08:00
py-hiphive
py-HofstadterTools */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
py-hoomd-blue science/py-hoomd-blue: Fix build with LLVM 19 2024-11-03 12:55:10 -05:00
py-inequality science/py-inequality: Update WWW and clean up pkg-descr 2024-07-19 00:46:28 +08:00
py-ipygany security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-jupyter_jsmol security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-kim-query
py-kimpy science/py-kimpy: update 2.1.0 → 2.1.1 2024-09-16 00:48:26 -07:00
py-kinematics science/py-kinematics: Convert to USE_PYTHON=pep517 2024-05-13 22:06:47 +08:00
py-kliff science/py-kliff: update 0.4.1 → 0.4.3 2024-11-17 10:10:33 -08:00
py-kpLib devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-liac-arff science/py-liac-arff: Convert to USE_PYTHON=pep517 2024-05-13 22:06:49 +08:00
py-libgetar science/{,py-}libgetar: update 1.1.5 → 1.1.7 2024-07-16 17:42:46 -07:00
py-libpysal science/py-libpysal: Convert to USE_PYTHON=pep517 2024-07-03 23:34:37 +08:00
py-lifelines
py-MDAnalysis science/py-MDAnalysis{,Tests}: update 2.3.0 → 2.7.0 2024-05-06 14:06:15 -07:00
py-MDAnalysisTests science/py-MDAnalysis{,Tests}: update 2.3.0 → 2.7.0 2024-05-06 14:06:15 -07:00
py-mdp
py-mercantile science/py-mercantile: Move science/mercantile to science/py-mercantile 2024-08-05 01:13:55 +08:00
py-meshio science/py-meshio: Fix build with removing setuptools from RUN_D 2024-06-25 13:28:26 +00:00
py-mmcif science/py-mmcif: update 0.84 → 0.90.0 2024-11-17 10:10:32 -08:00
py-mmtf-python
py-molmod
py-moltemplate science/py-moltemplate: Update WWW 2024-11-17 10:10:31 -08:00
py-mp-api science/py-mp-api: Add NO_ARCH 2024-03-10 03:10:05 +08:00
py-mpcontribs-client devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-mplhep science/py-mplhep: update 0.3.49 → 0.3.51 2024-08-08 10:18:44 -07:00
py-mplhep-data science/py-mplhep-data: New port: Font (Data) sub-package for mplhep 2024-06-23 03:54:13 -07:00
py-mrchem
py-ncrystal science/{,py-}ncrystal: update 3.9.6 → 3.9.7 2024-09-25 01:33:35 -07:00
py-netCDF4
py-netcdf-flattener science/py-netcdf-flattener: Convert to USE_PYTHON=pep517 2024-05-13 22:06:50 +08:00
py-nglview science/py-nglview: update 3.0.7 → 3.1.2 2024-04-20 01:34:04 -07:00
py-nibabel science/py-nibabel: update 5.3.0 → 5.3.2 2024-11-17 10:10:31 -08:00
py-nilearn science/py-nilearn: expire on 2024-12-31 for devel/py-codecov 2024-09-30 21:37:15 +02:00
py-obspy science/py-obspy: Update to 1.4.1 2024-05-06 08:53:04 +00:00
py-oddt
py-openbabel all: drop support for expired FreeBSD 14.0 2024-10-01 20:56:20 +02:00
py-openEMS science/py-openEMS: Remove unnecessary line 2024-08-30 10:50:55 -07:00
py-OpenFermion science/py-OpenFermion: update 1.6.0 → 1.6.1 2024-04-27 00:52:59 -07:00
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC science/py-OpenMC: update 0.14.0 → 0.15.0 2024-06-22 00:22:25 -07:00
py-openpiv
py-optking science/py-optking: update 0.2.1 → 0.3.0 2024-09-16 00:48:25 -07:00
py-paida
py-paramz science/py-paramz: update 0.9.5 → 0.9.6 2024-08-20 01:42:35 -07:00
py-penaltymodel
py-periodictable science/py-periodictable: update 1.7.0 → 1.7.1 2024-07-09 02:12:11 -07:00
py-phono3py science/py-phono3py: update 1.22.3 → 3.7.0 2024-11-17 16:13:27 -08:00
py-phonopy science/{,py-}phonopy: update 2.28.0 → 2.30.1 2024-11-15 01:20:26 -08:00
py-PubChemPy
py-pupynere science/py-pupynere: Clean up pkg-descr 2024-07-19 00:46:30 +08:00
py-py3Dmol science/py-py3Dmol: update 2.1.0 → 2.4.2 2024-11-15 01:20:25 -08:00
py-pyaixi science/py-pyaixi: Convert to USE_PYTHON=pep517 2024-05-13 22:06:54 +08:00
py-pyberny
py-pycsw graphics/py-OWSLib: Update to 0.31.0 2024-08-28 08:54:29 +02:00
py-pydicom science/py-pydicom: update 3.0.1 2024-10-14 06:32:50 +00:00
py-PyFR
py-pygeodesy science/py-pygeodesy: Convert to USE_PYTHON=pep517 2024-05-13 22:06:57 +08:00
py-pygeometa graphics/py-OWSLib: Update to 0.31.0 2024-08-28 08:54:29 +02:00
py-pygmo2 devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
py-pyked devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-pymatgen science/py-pymatgen: update 2022.7.19 → 2024.11.13 2024-11-15 01:20:24 -08:00
py-pymatgen-analysis-alloys science/py-pymatgen-analysis-alloys: update 0.0.6 → 0.0.7 2024-11-15 01:20:25 -08:00
py-pymbd
py-pymol science/py-pymol: update 2.5.0-97 → 3.0.0 2024-11-17 10:10:32 -08:00
py-PyNE devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-pyosf
py-pyphot science/py-pyphot: New port: Library for computing photometry from spectra 2024-09-21 22:51:20 -07:00
py-pyprecice science/py-pyprecice: update 2.5.0.4 → 3.1.2 2024-11-13 11:33:57 -08:00
py-pyqubo
py-pysal science/py-pysal: Update to 24.1 2024-07-19 00:46:34 +08:00
py-pyscf science/py-pyscf: update 2.6.2 → 2.7.0 2024-09-27 01:38:48 -07:00
py-pyteomics science/py-pyteomics: Update to 4.7.5 2024-10-25 23:56:47 +08:00
py-qcelemental science/py-qcelemental: update 0.27.1 → 0.28.0 2024-07-12 22:17:53 -07:00
py-qcengine devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-qspin
py-quantities science/py-quantities: update 0.16.0 → 0.16.1 2024-11-08 18:50:30 -08:00
py-rmf science/{,py-}rmf: update 1.6.0 → 1.6.1 2024-05-24 21:12:09 -07:00
py-rmsd science/py-rmsd: update 1.4 → 1.5.1 2024-11-16 02:27:22 -08:00
py-ruffus
py-sarpy science/py-sarpy: Add ALL option 2024-10-18 03:03:16 +08:00
py-scikit-fuzzy science/py-scikit-fuzzy: update 0.4.2 → 0.5.0 2024-11-08 18:50:27 -08:00
py-scikit-learn
py-scikit-optimize science/py-scikit-optimize: Update to 0.10.2 2024-09-30 21:36:36 +08:00
py-scikit-sparse science/py-scikit-sparse: update 0.4.8 → 0.4.15 2024-11-08 18:50:31 -08:00
py-scimath
py-scipy science/py-scipy: Remove unnecessary substitution 2024-09-09 03:43:18 +08:00
py-scoria
py-sdf
py-segregation graphics/py-geopandas: Update to 0.14.4 2024-08-28 08:54:30 +02:00
py-segyio science/{,py-}segyio: update 1.9.11 → 1.9.12 2024-04-08 00:31:00 -07:00
py-signac
py-SimpleSpectral
py-sklearn-pandas science/py-sklearn-pandas: Convert to USE_PYTHON=pep517 2024-05-13 22:07:04 +08:00
py-skrebate science/py-skrebate: Convert to USE_PYTHON=pep517 2024-05-13 22:07:06 +08:00
py-spaghetti science/py-spaghetti: Remove PY_SETUPTOOLS 2024-04-08 14:46:56 +08:00
py-spglib science/py-spglib: Remove workaround for the _version_ symbol; Add missing dependency 2024-09-13 01:24:48 -07:00
py-symfc science/py-symfc: New port: Generate symmetrized force constants 2024-11-15 01:20:26 -08:00
py-tensorflow Bump PORTREVISIONs after grpc shlib change in 2715f16944 2024-11-11 23:13:54 -04:00
py-thewalrus
py-tobler science/py-tobler: Update to 0.12.0 2024-11-15 18:17:14 +08:00
py-trainstation science/py-trainstation: update 1.0 → 1.1 2024-06-12 08:26:14 -07:00
py-trx-python science/py-trx-python: update 0.2.9 → 0.3 2024-11-08 18:50:28 -08:00
py-tweedledum science/py-tweedledum: update 1.1.1 → 1.1.1-20221123 2024-06-02 21:24:15 -07:00
py-vedo science/py-vedo: update 2023.5.0 → 2024.5.2 2024-06-24 12:58:30 -07:00
py-veusz */*: Chase removal of sip from RUN_DEPENDS 2024-10-19 03:33:57 -04:00
py-xbout devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
pybrain
pynn science/pynn: Update to 0.12.3 2024-05-08 10:27:21 +00:00
q
qbox textproc/xerces-c3: Update to 3.3.0 2024-10-25 23:56:41 +08:00
qcl
qiskit-aer science/qiskit-aer: Brokn on 15 with clang-19; Update WWW 2024-11-08 22:06:07 -08:00
qmcpack devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
qt6-quick3dphysics Qt6: Update to 6.7.3 2024-09-29 03:05:40 -04:00
quantum-espresso */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
quantum-espresso-pseudopotentials science/quantum-espresso-pseudopotentials: update g20180406 → g20220916 2024-03-16 01:05:36 -07:00
quantum-jet */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
qwalk
R-cran-bayesm
R-cran-cmprsk science/R-cran-cmprsk: Update to 2.2-12 2024-05-21 03:45:17 +00:00
R-cran-DCluster
R-cran-e1071 science/R-cran-e1071: Update to 1.7-16 2024-09-19 09:24:55 +01:00
R-cran-eco
R-cran-Epi science/R-cran-Epi: Update to 2.56 2024-10-06 07:36:27 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA science/R-cran-fastICA: drop maintainership 2024-09-14 18:42:16 -04:00
R-cran-kernlab science/R-cran-kernlab: Update to 0.9-33 2024-08-15 03:12:49 +00:00
R-cran-ks
R-cran-snow
R-cran-som science/R-cran-som: Update to 0.3-5.2 2024-09-22 11:04:08 +00:00
R-cran-udunits2
rdkit devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
rmf devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
rubygem-ai4r
rubygem-cdo science/rubygem-cdo: Update WWW and clean up pkg-descr 2024-07-19 00:47:17 +08:00
rubygem-rgeo
rubygem-rgeo-geojson science/rubygem-rgeo-geojson: Update to 2.2.0 2024-07-24 19:45:20 +08:00
rubygem-rgeo-proj4 graphics/proj: Update to 9.4.1 2024-08-28 08:54:30 +02:00
rubygem-rgeo-shapefile science/rubygem-rgeo-shapefile: Change RUN_DEPENDS from rubygem-dbf to rubygem-dbf4 2024-05-20 01:18:13 +08:00
rubygem-ruby-netcdf
salome-configuration */*: Replace format=bsdtar with format=ustar in tar archive operations 2024-02-18 17:48:08 -08:00
salome-kernel devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
scidavis science/scidavis: makr broken with PYTHON option 2024-10-24 15:26:07 +03:00
sciplot
seacas science/seacas: New port: Sandia Engineering Analysis Code Access System (SEACAS) 2024-10-31 13:34:04 -07:00
segyio science/{,py-}segyio: update 1.9.11 → 1.9.12 2024-04-08 00:31:00 -07:00
serac
shelxle science/shelxle: update 1.0.1678 → 1.0.1680 2024-09-27 01:38:48 -07:00
siconos science/siconos: update 4.4.0 → 4.5.0 2024-08-01 22:09:50 -07:00
siesta
sigrok-cli science/sigrok-cli: Moved man to share/man 2024-02-22 14:23:39 +01:00
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
simgrid devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
simint
simlib
simple-dftd3 textproc/toml-f: update 0.3.1 → 0.4.2 2024-11-19 01:29:08 -08:00
simsmith
sirius science/sirius: update 7.5.2 → 7.6.0 2024-08-23 20:45:45 -07:00
smoldyn science/smoldyn: Fix build with tiff 4.7.0 2024-10-09 21:43:26 +02:00
sparta science/sparta: update 18Jul2022 → 4Sep2024 2024-09-04 20:01:34 -07:00
spglib science/{,py-}spglib: update 2.4.0 → 2.5.0 2024-07-12 02:01:04 -07:00
spheral devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
step science/step: Fix build with LLVM >= 19.1.0-rc1 2024-10-30 04:40:48 -04:00
tblite science/tblite: update 0.3.0 → 0.4.0 2024-11-19 01:29:08 -08:00
teem
tfel devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
tfel-edf devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
thermofun science/thermofun: update 0.4.5 → 0.5.0 2024-07-26 01:57:56 -07:00
tinker science/tinker: Fix fetch: the release was re-rolled 2024-06-23 18:32:59 -07:00
trilinos science/trilinos: Broken on 15 with clanmg-19 2024-11-03 19:46:39 -08:00
ttk */*: Bump dependencioes after devel/jsoncpp update 2024-09-12 09:20:06 -07:00
tweedledum
udunits science/udunits: Cosmetic change 2024-11-15 18:17:06 +08:00
ukrmol+ */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
v_sim devel/py-gobject3: use USE_GNOME=pygobject3 helper 2024-11-19 11:59:07 -05:00
vipster
vmd
voro++ science/voro++: Move man pages to share/man 2024-03-21 17:10:16 +00:00
votca devel/boost: bump consu,ers after update Boost to 1.86 release 2024-11-20 13:05:25 +03:00
wannier90
wwplot science/wwplot: update 0.0.9 → 1.0.0 2024-04-19 12:28:22 -07:00
wxmacmolplt science/wxmacmolplt: Move man pages to share/man 2024-03-21 17:10:16 +00:00
xcfun
xcrysden
xdrawchem
xtb */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
yoda
zotero science/zotero: Really fix plist 2024-09-08 09:54:46 +02:00
zx
Makefile science/py-symfc: New port: Generate symmetrized force constants 2024-11-15 01:20:26 -08:00