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freebsd-ports/science
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Johannes Jost Meixner efea8ccd01 science/py-h5py: upgrade to 2.4.0 
- upgrade to 2.4.0

Differential Revision:	https://reviews.freebsd.org/D1456
Approved by:	koobs (mentor)
2015-01-13 11:23:25 +00:00
..
2d-rewriter Cleanup plist 2014-11-12 18:48:53 +00:00
afni Cleanup plist 2014-11-12 18:48:53 +00:00
avogadro - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
bddsolve Cleanup plist 2014-11-12 18:48:53 +00:00
bft Add USES=libtool and INSTALL_TARGET=install-strip 2014-07-08 15:24:14 +00:00
bodr Cleanup plist 2014-11-12 18:48:53 +00:00
brian - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
buddy Cleanup plist 2014-11-12 18:48:53 +00:00
cdcl Cleanup plist 2014-11-12 18:48:53 +00:00
cdf Cleanup plist 2014-11-12 18:48:53 +00:00
cdo - Update to 1.6.7 2014-12-28 13:14:31 +00:00
cgnslib Cleanup plist 2014-11-12 18:48:53 +00:00
cgribex - Add cgribex 1.6.3 2014-04-29 13:28:31 +00:00
checkmol Stagify. 2014-06-10 12:52:48 +00:00
chemical-mime-data Split devel/gettext in devel/gettext-runtime and devel/gettext-tools. The 2014-11-29 18:22:32 +00:00
chemtool Cleanup plist 2014-11-12 18:48:53 +00:00
chemtool-devel Cleanup plist 2014-11-12 18:48:53 +00:00
clhep Cleanup plist 2014-11-12 18:48:53 +00:00
colt Remove NOPORTDOCS and NOPORTEXAMPLES. 2014-07-04 22:08:14 +00:00
crf++ Reset maintainership: 2014-12-02 22:40:56 +00:00
dcl Cleanup plist 2014-11-12 18:48:53 +00:00
devisor Cleanup plist 2014-11-12 18:48:53 +00:00
dlpoly-classic - Update net/openmpi to 1.8.4 2014-12-26 14:24:12 +00:00
ecs Upgrade to version 2.0.3. 2014-09-14 14:42:20 +00:00
epte
fastcap Cleanup plist 2014-11-12 18:48:53 +00:00
fasthenry Cleanup plist 2014-11-12 18:48:53 +00:00
fisicalab Cleanup plist 2014-11-12 18:48:53 +00:00
fvcom Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
fvcom-mpi - Update net/openmpi to 1.8.4 2014-12-26 14:24:12 +00:00
fvm - Update net/openmpi to 1.8.4 2014-12-26 14:24:12 +00:00
gchemutils Cleanup plist 2014-11-12 18:48:53 +00:00
getdp Cleanup plist 2014-11-12 18:48:53 +00:00
ghemical - Upadate biology/mopac to version 1.15 2014-12-16 22:10:23 +00:00
ghmm Reset maintainership: 2014-12-02 22:40:56 +00:00
gnudatalanguage Bump portrevision after png update 2014-12-25 20:54:41 +00:00
gramps - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
grib_api Bump portrevision after png update 2014-12-25 20:54:41 +00:00
gromacs - Update net/openmpi to 1.8.4 2014-12-26 14:24:12 +00:00
gsmc - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
gtamsanalyzer Cleanup plist 2014-11-12 18:48:53 +00:00
gwyddion - Update to version 2.38 2014-11-02 17:43:03 +00:00
h5utils Bump portrevision after png update 2014-12-25 20:54:41 +00:00
harminv Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
hdf Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
hdf5 - Mark MAKE_JOBS_UNSAFE 2014-05-24 06:50:24 +00:00
hdf-java Cleanup plist 2014-11-12 18:48:53 +00:00
hs-bio Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
InsightToolkit Cleanup plist 2014-11-12 18:48:53 +00:00
isaac-cfd Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
jmol Cleanup plist 2014-11-12 18:48:53 +00:00
jstrack Change my non-FreeBSD MAINTAINER mail to bofh@ 2014-12-24 00:14:11 +00:00
kalzium KDE/FreeBSD team presents KDE SC 4.14.2 and KDE Workspace 4.11.13! 2014-10-19 15:57:27 +00:00
kst2 science/kst2: 2014-11-13 14:26:54 +00:00
lamprop Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
libctl science/libctl: update to 3.2.2 2015-01-04 12:56:56 +00:00
libghemical - Upadate biology/mopac to version 1.15 2014-12-16 22:10:23 +00:00
libint science: Fix mpqc, libint and unbreak ghemical, and libghemical atomically 2014-09-25 11:04:02 +00:00
libkml Cleanup plist 2014-11-12 18:48:53 +00:00
liblinear Update "BSD" license in science category 2014-12-07 15:17:10 +00:00
liboglappth Cleanup plist 2014-11-12 18:48:53 +00:00
libquantum Convert to USES=libtool 2014-07-08 13:34:32 +00:00
libsvm Update "BSD" license in science category 2014-12-07 15:17:10 +00:00
libsvm-python - Update to 3.18 2014-05-30 13:47:15 +00:00
linsmith Cleanup plist 2014-11-12 18:48:53 +00:00
massxpert Bump portrevision after png update 2014-12-25 20:54:41 +00:00
mbdyn Cleanup plist 2014-11-12 18:48:53 +00:00
mcstas science/mcstas: USE_BISON is not used 2015-01-05 18:23:27 +00:00
mcstas-comps New port: science/mcstas-comps 2015-01-05 09:38:16 +00:00
medit cleanup plist 2014-12-20 19:35:10 +00:00
meep Mark BROKEN: Depends on conflicting guile and guile2 (via libctl) 2015-01-11 19:00:46 +00:00
mei Cleanup plist 2014-11-12 18:48:53 +00:00
metaf2xml Reset maintainership: 2014-12-02 22:40:56 +00:00
minc2 Update "BSD" license in science category 2014-12-07 15:17:10 +00:00
mol2ps cleanup plist 2014-12-20 19:35:10 +00:00
mpb science/mpb: put option helpers at the correct place 2015-01-04 14:02:35 +00:00
mpqc Cleanup plist 2014-11-12 18:48:53 +00:00
mpqc-mpich Stage science/mpqc and science/mpqc-mpich 2014-09-08 00:20:03 +00:00
ncs Uses blaslapack.mk. 2015-01-10 15:33:26 +00:00
netcdf Cleanup plist 2014-11-12 18:48:53 +00:00
netcdf-cxx - Use USE_GITHUB 2014-08-15 17:27:48 +00:00
netcdf-fortran - Update to 4.4.1 2014-09-13 15:19:28 +00:00
nifticlib Restore r323814 to remove MAKE_JOBS_UNSAFE. 2014-02-20 22:40:14 +00:00
openbabel Cleanup plist 2014-11-12 18:48:53 +00:00
openkim Cleanup plist 2014-11-12 18:48:53 +00:00
p5-Algorithm-SVMLight Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-3DBuilder Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Bond-Find Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Canonicalize Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Elements Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-MDLMol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-Mopac Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-PDB Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SLN Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMARTS Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-SMILES Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-VRML Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-File-XYZ Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-FormulaPattern Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-InternalCoords Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Isotope Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-MacroMol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-MidasPattern Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Mok Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Mol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Pattern Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Reaction Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Chemistry-Ring Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-BUFR Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-Coordinates-Converter Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-Coordinates-Converter-iArea Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-ReadGRIB Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.101 2015-01-04 17:12:32 +00:00
p5-PerlMol Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
p5-Physics-Unit Change the way Perl modules are installed, update the default Perl to 5.18. 2014-11-26 13:08:24 +00:00
paje Cleanup plist 2014-11-12 18:48:53 +00:00
paraview Bump portrevision after png update 2014-12-25 20:54:41 +00:00
pnetcdf - Update net/openmpi to 1.8.4 2014-12-26 14:24:12 +00:00
psychopy - Update to 1.81.03 2014-12-27 12:38:53 +00:00
pulseview science/pulseview: Remove unnecessary RUN_DEPENDS 2014-08-03 16:16:21 +00:00
py-cdo - Add py-cdo 1.2.3 2014-09-13 15:18:32 +00:00
py-coards - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-DendroPy Cleanup plist 2014-11-12 18:48:53 +00:00
py-h5py science/py-h5py: upgrade to 2.4.0 2015-01-13 11:23:25 +00:00
py-hcluster - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-mdp Change my non-FreeBSD MAINTAINER mail to bofh@ 2014-12-24 00:14:11 +00:00
py-mlpy - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-netCDF4 Change my non-FreeBSD MAINTAINER mail to bofh@ 2014-12-24 00:14:11 +00:00
py-obspy Fix compilation after recent numpy patch. 2014-10-23 15:23:27 +00:00
py-paida - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-pupynere - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-pyaixi Canonicalize a few licenses 2014-12-07 00:07:47 +00:00
py-pydap - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-pydicom - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-pysal Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-scikit-learn Explicitly link with libblas to avoid errors like 2014-10-30 11:52:48 +00:00
py-scimath - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
py-scipy Fix build after r369447 2014-09-30 08:39:34 +00:00
py-ws2300 - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
pybrain - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
pycdf - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
pynn Cleanup plist 2014-11-12 18:48:53 +00:00
pyteomics - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
pyteomics.biolccc - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
qcl - Fix build with clang by using std::vector instead of variable size array of non-POD type 2014-09-04 18:43:58 +00:00
qtresistors
R-cran-AMORE Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-bayesm Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-DCluster Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-e1071 Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-eco Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-Epi Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-epicalc Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-snow Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-som Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
rubygem-ai4r science/rubygem-ai4r: update to 1.13 2014-08-23 21:52:50 +00:00
rubygem-cdo - Add rubygem-cdo 1.2.3 2014-09-13 15:18:54 +00:00
rubygem-netcdf - Update to 4.3.2 (from science/netcdf4) 2014-05-03 03:17:19 +00:00
sigrok-cli science/sigrok-cli: update to 0.5.0 2014-07-28 23:06:29 +00:00
sigrok-firmware Add new port: science/sigrok-firmware 2014-08-03 22:37:51 +00:00
sigrok-firmware-fx2lafw cleanup plist 2014-12-20 19:35:10 +00:00
sigrok-firmware-utils Switch default python3 version from 3.3 to 3.4. 2015-01-10 23:15:27 +00:00
silo - Update to 4.10 2014-09-12 23:32:38 +00:00
simlib Stagify. 2014-06-10 15:07:59 +00:00
simsmith Java based Smith chart program. Performs single-frequency and sweep charting 2014-07-03 21:02:10 +00:00
step KDE/FreeBSD team presents KDE SC 4.14.2 and KDE Workspace 4.11.13! 2014-10-19 15:57:27 +00:00
svmlight Cleanup plist 2014-11-12 18:48:53 +00:00
szip - Add my LOCAL to MASTER_SITES 2014-04-29 13:28:25 +00:00
udunits - Update to 2.2.17 2014-09-03 19:09:22 +00:00
v_sim Upgrade to 3.7.2. 2014-12-22 14:36:52 +00:00
veusz - Convert ports of science/ and security to new USES=python 2014-10-24 16:50:42 +00:00
vmd Cleanup plist 2014-11-12 18:48:53 +00:00
voro++ Cleanup plist 2014-11-12 18:48:53 +00:00
xfce4-equake-plugin - Update to 1.3.6 2014-11-15 10:50:32 +00:00
xmakemol cleanup plist 2014-12-20 19:35:10 +00:00
Makefile New port: science/mcstas-comps 2015-01-05 09:38:16 +00:00