1
0
mirror of https://git.FreeBSD.org/ports.git synced 2024-10-21 20:38:45 +00:00
freebsd-ports/biology/primer3/pkg-descr
Ying-Chieh Liao 47be6d4a10 add primer3 0.9
Primer3 helps to choose primers for PCR reactions

PR:		35298
Submitted by:	Tony Maher <tonym@biolateral.com.au>
2002-09-17 15:31:09 +00:00

24 lines
826 B
Plaintext

"Primer3 is a complete rewrite of the original PRIMER program
(Primer 0.5), written by Steve Lincoln, Mark Daly, and Eric
Lander. See DIFFERENCES FROM EARLIER VERSIONS for a discussion
of how Primer3 differs from its predecessors, Primer 0.5 and
Primer v2.
Primer3 picks primers for PCR reactions, considering as criteria:
o oligonucleotide melting temperature, size, GC content,
and primer-dimer possibilities,
o PCR product size,
o positional constraints within the source sequence, and
o miscellaneous other constraints.
All of these criteria are user-specifiable as constraints, and
some are specifiable as terms in an objective function that
characterizes an optimal primer pair."
- from the README file
WWW: http://www-genome.wi.mit.edu/genome_software/other/primer3.html
--
Tony Maher <tonym@biolateral.com.au>