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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-03 01:23:49 +00:00
freebsd-ports/biology/artemis/pkg-plist
2015-03-11 14:41:53 +00:00

1782 lines
122 KiB
Plaintext

artemis-%%PORTVERSION%%/README
artemis-%%PORTVERSION%%/act
artemis-%%PORTVERSION%%/art
artemis-%%PORTVERSION%%/artemis_sqlmap/Analysis.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/AnalysisFeature.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/CvTerm.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/Db.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/DbXRef.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/Feature.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureCvTerm.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureCvTermDbXRef.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureCvTermProp.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureCvTermPub.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureDbXRef.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureLoc.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureProp.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/FeatureRelationship.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/Organism.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/Pub.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/Synonym.xml
artemis-%%PORTVERSION%%/artemis_sqlmap/chado_iBatis_config.properties
artemis-%%PORTVERSION%%/artemis_sqlmap/chado_iBatis_config.xml
artemis-%%PORTVERSION%%/etc/af063097.embl
artemis-%%PORTVERSION%%/etc/af063097.fasta
artemis-%%PORTVERSION%%/etc/af063097_v_b132222.crunch
artemis-%%PORTVERSION%%/etc/b132222.embl
artemis-%%PORTVERSION%%/etc/b132222.fasta
artemis-%%PORTVERSION%%/etc/c1215.blastn.crunch
artemis-%%PORTVERSION%%/etc/c1215.blastn.tab
artemis-%%PORTVERSION%%/etc/c1215.embl
artemis-%%PORTVERSION%%/etc/c1215.genbank
artemis-%%PORTVERSION%%/etc/c1215.seq
artemis-%%PORTVERSION%%/etc/feature_keys
artemis-%%PORTVERSION%%/etc/feature_keys_gff
artemis-%%PORTVERSION%%/etc/go_associations.pl
artemis-%%PORTVERSION%%/etc/log4j.properties
artemis-%%PORTVERSION%%/etc/options
artemis-%%PORTVERSION%%/etc/pombe.usage
artemis-%%PORTVERSION%%/etc/qualifier_types
artemis-%%PORTVERSION%%/etc/qualifier_types_gff
artemis-%%PORTVERSION%%/etc/results_to_netscape
artemis-%%PORTVERSION%%/etc/run_blastn
artemis-%%PORTVERSION%%/etc/run_blastn.sanger
artemis-%%PORTVERSION%%/etc/run_blastp
artemis-%%PORTVERSION%%/etc/run_blastp.sanger
artemis-%%PORTVERSION%%/etc/run_blastx
artemis-%%PORTVERSION%%/etc/run_blastx.sanger
artemis-%%PORTVERSION%%/etc/run_clustalx
artemis-%%PORTVERSION%%/etc/run_clustalx.sanger
artemis-%%PORTVERSION%%/etc/run_fasta
artemis-%%PORTVERSION%%/etc/run_fasta.sanger
artemis-%%PORTVERSION%%/etc/run_fastx
artemis-%%PORTVERSION%%/etc/run_fastx.sanger
artemis-%%PORTVERSION%%/etc/run_hth
artemis-%%PORTVERSION%%/etc/run_jalview
artemis-%%PORTVERSION%%/etc/run_pepstats
artemis-%%PORTVERSION%%/etc/run_sigcleave
artemis-%%PORTVERSION%%/etc/run_smart
artemis-%%PORTVERSION%%/etc/run_tblastn
artemis-%%PORTVERSION%%/etc/run_tblastx
artemis-%%PORTVERSION%%/images/helix.gif
artemis-%%PORTVERSION%%/images/icon.gif
artemis-%%PORTVERSION%%/images/sanger-centre.gif
artemis-%%PORTVERSION%%/lib/LICENSE.Apache
artemis-%%PORTVERSION%%/lib/LICENSE.JDBC
artemis-%%PORTVERSION%%/lib/README
artemis-%%PORTVERSION%%/lib/biojava.jar
artemis-%%PORTVERSION%%/lib/chado-14-interface.jar
artemis-%%PORTVERSION%%/lib/ibatis/README
artemis-%%PORTVERSION%%/lib/ibatis/cglib-nodep-2.2_beta1.jar
artemis-%%PORTVERSION%%/lib/ibatis/ibatis-2.3.0.677.jar
artemis-%%PORTVERSION%%/lib/ibatis/license.txt
artemis-%%PORTVERSION%%/lib/ibatis/log4j-1.2.14.jar
artemis-%%PORTVERSION%%/lib/j2ssh/COMMONS.LICENSE
artemis-%%PORTVERSION%%/lib/j2ssh/J2SSH.LICENSE
artemis-%%PORTVERSION%%/lib/j2ssh/README
artemis-%%PORTVERSION%%/lib/j2ssh/commons-logging.jar
artemis-%%PORTVERSION%%/lib/j2ssh/j2ssh-artemis-plugin.jar
artemis-%%PORTVERSION%%/lib/j2ssh/j2ssh-core.jar
artemis-%%PORTVERSION%%/lib/j2ssh/j2ssh.properties
artemis-%%PORTVERSION%%/lib/jakarta-regexp-1.2.jar
artemis-%%PORTVERSION%%/lib/jemAlign.jar
artemis-%%PORTVERSION%%/lib/jobcontrol.jar
artemis-%%PORTVERSION%%/lib/macos.jar
artemis-%%PORTVERSION%%/lib/postgresql-8.1-407.jdbc2ee.jar
artemis-%%PORTVERSION%%/lib/retrotranslator-runtime-1.1.0.jar
artemis-%%PORTVERSION%%/nsdb/CommitFailed.class
artemis-%%PORTVERSION%%/nsdb/CommitFailed.java
artemis-%%PORTVERSION%%/nsdb/CommitFailedHelper.class
artemis-%%PORTVERSION%%/nsdb/CommitFailedHelper.java
artemis-%%PORTVERSION%%/nsdb/CommitFailedHolder.java
artemis-%%PORTVERSION%%/nsdb/Datestamp.class
artemis-%%PORTVERSION%%/nsdb/Datestamp.java
artemis-%%PORTVERSION%%/nsdb/DatestampHelper.class
artemis-%%PORTVERSION%%/nsdb/DatestampHelper.java
artemis-%%PORTVERSION%%/nsdb/DatestampHolder.java
artemis-%%PORTVERSION%%/nsdb/Embl.class
artemis-%%PORTVERSION%%/nsdb/Embl.java
artemis-%%PORTVERSION%%/nsdb/EmblHelper.class
artemis-%%PORTVERSION%%/nsdb/EmblHelper.java
artemis-%%PORTVERSION%%/nsdb/EmblHolder.java
artemis-%%PORTVERSION%%/nsdb/EmblOperations.class
artemis-%%PORTVERSION%%/nsdb/EmblOperations.java
artemis-%%PORTVERSION%%/nsdb/EmblPackage/Superceded.class
artemis-%%PORTVERSION%%/nsdb/EmblPackage/Superceded.java
artemis-%%PORTVERSION%%/nsdb/EmblPackage/SupercededHelper.class
artemis-%%PORTVERSION%%/nsdb/EmblPackage/SupercededHelper.java
artemis-%%PORTVERSION%%/nsdb/EmblPackage/SupercededHolder.java
artemis-%%PORTVERSION%%/nsdb/EmblSeq.class
artemis-%%PORTVERSION%%/nsdb/EmblSeq.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqHelper.class
artemis-%%PORTVERSION%%/nsdb/EmblSeqHelper.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqHolder.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqOperations.class
artemis-%%PORTVERSION%%/nsdb/EmblSeqOperations.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriter.class
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriter.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriterHelper.class
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriterHelper.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriterHolder.java
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriterOperations.class
artemis-%%PORTVERSION%%/nsdb/EmblSeqWriterOperations.java
artemis-%%PORTVERSION%%/nsdb/EmblWriter.class
artemis-%%PORTVERSION%%/nsdb/EmblWriter.java
artemis-%%PORTVERSION%%/nsdb/EmblWriterHelper.class
artemis-%%PORTVERSION%%/nsdb/EmblWriterHelper.java
artemis-%%PORTVERSION%%/nsdb/EmblWriterHolder.java
artemis-%%PORTVERSION%%/nsdb/EmblWriterOperations.class
artemis-%%PORTVERSION%%/nsdb/EmblWriterOperations.java
artemis-%%PORTVERSION%%/nsdb/EntryInfo.class
artemis-%%PORTVERSION%%/nsdb/EntryInfo.java
artemis-%%PORTVERSION%%/nsdb/EntryInfoHelper.java
artemis-%%PORTVERSION%%/nsdb/EntryInfoHolder.java
artemis-%%PORTVERSION%%/nsdb/EntryInfoListHelper.java
artemis-%%PORTVERSION%%/nsdb/EntryInfoListHolder.java
artemis-%%PORTVERSION%%/nsdb/EntryInfoOperations.class
artemis-%%PORTVERSION%%/nsdb/EntryInfoOperations.java
artemis-%%PORTVERSION%%/nsdb/EntryStats.class
artemis-%%PORTVERSION%%/nsdb/EntryStats.java
artemis-%%PORTVERSION%%/nsdb/EntryStatsHelper.class
artemis-%%PORTVERSION%%/nsdb/EntryStatsHelper.java
artemis-%%PORTVERSION%%/nsdb/EntryStatsHolder.java
artemis-%%PORTVERSION%%/nsdb/FeatureLocation.class
artemis-%%PORTVERSION%%/nsdb/FeatureLocation.java
artemis-%%PORTVERSION%%/nsdb/FeatureLocationHelper.class
artemis-%%PORTVERSION%%/nsdb/FeatureLocationHelper.java
artemis-%%PORTVERSION%%/nsdb/FeatureLocationHolder.java
artemis-%%PORTVERSION%%/nsdb/FeatureLocationListHelper.java
artemis-%%PORTVERSION%%/nsdb/FeatureLocationListHolder.java
artemis-%%PORTVERSION%%/nsdb/FeatureLocationOperations.class
artemis-%%PORTVERSION%%/nsdb/FeatureLocationOperations.java
artemis-%%PORTVERSION%%/nsdb/InexactLocation.class
artemis-%%PORTVERSION%%/nsdb/InexactLocation.java
artemis-%%PORTVERSION%%/nsdb/InexactLocationHelper.class
artemis-%%PORTVERSION%%/nsdb/InexactLocationHelper.java
artemis-%%PORTVERSION%%/nsdb/InexactLocationHolder.java
artemis-%%PORTVERSION%%/nsdb/InvalidKey.class
artemis-%%PORTVERSION%%/nsdb/InvalidKey.java
artemis-%%PORTVERSION%%/nsdb/InvalidKeyHelper.class
artemis-%%PORTVERSION%%/nsdb/InvalidKeyHelper.java
artemis-%%PORTVERSION%%/nsdb/InvalidKeyHolder.java
artemis-%%PORTVERSION%%/nsdb/InvalidQualifier.class
artemis-%%PORTVERSION%%/nsdb/InvalidQualifier.java
artemis-%%PORTVERSION%%/nsdb/InvalidQualifierHelper.class
artemis-%%PORTVERSION%%/nsdb/InvalidQualifierHelper.java
artemis-%%PORTVERSION%%/nsdb/InvalidQualifierHolder.java
artemis-%%PORTVERSION%%/nsdb/Location.class
artemis-%%PORTVERSION%%/nsdb/Location.java
artemis-%%PORTVERSION%%/nsdb/LocationHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationListHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationListHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationOperations.class
artemis-%%PORTVERSION%%/nsdb/LocationOperations.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/IdListHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/IdListHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/IdListHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocGapHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocGapHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocNodeTypeCodeHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocNodeTypeCodeHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocOperator.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocOperator.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocOperatorHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocOperatorHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocOperatorHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocPhysicalSegmentHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocPhysicalSegmentHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocVirtualSegment.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocVirtualSegment.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocVirtualSegmentHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocVirtualSegmentHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocVirtualSegmentHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNodeListHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNodeListHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNodeListHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNode_u.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNode_u.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNode_uHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNode_uHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationPackage/LocationNode_uHolder.java
artemis-%%PORTVERSION%%/nsdb/LocationParse.class
artemis-%%PORTVERSION%%/nsdb/LocationParse.java
artemis-%%PORTVERSION%%/nsdb/LocationParseHelper.class
artemis-%%PORTVERSION%%/nsdb/LocationParseHelper.java
artemis-%%PORTVERSION%%/nsdb/LocationParseHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeature.class
artemis-%%PORTVERSION%%/nsdb/NucFeature.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeatureHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureListHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeatureListHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureListHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureOperations.class
artemis-%%PORTVERSION%%/nsdb/NucFeatureOperations.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/Qualifier.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/Qualifier.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierListHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierListHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierListHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierTypeCodeHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierTypeCodeHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValueListHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValueListHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValueListHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValue_u.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValue_u.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValue_uHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValue_uHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeaturePackage/QualifierValue_uHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriter.class
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriter.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterHelper.class
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterListHelper.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterListHolder.java
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterOperations.class
artemis-%%PORTVERSION%%/nsdb/NucFeatureWriterOperations.java
artemis-%%PORTVERSION%%/nsdb/NucSeq.class
artemis-%%PORTVERSION%%/nsdb/NucSeq.java
artemis-%%PORTVERSION%%/nsdb/NucSeqHelper.java
artemis-%%PORTVERSION%%/nsdb/NucSeqHolder.java
artemis-%%PORTVERSION%%/nsdb/NucSeqListHelper.java
artemis-%%PORTVERSION%%/nsdb/NucSeqListHolder.java
artemis-%%PORTVERSION%%/nsdb/NucSeqOperations.class
artemis-%%PORTVERSION%%/nsdb/NucSeqOperations.java
artemis-%%PORTVERSION%%/nsdb/OutOfDate.class
artemis-%%PORTVERSION%%/nsdb/OutOfDate.java
artemis-%%PORTVERSION%%/nsdb/OutOfDateHelper.class
artemis-%%PORTVERSION%%/nsdb/OutOfDateHelper.java
artemis-%%PORTVERSION%%/nsdb/OutOfDateHolder.java
artemis-%%PORTVERSION%%/nsdb/QualifierParse.class
artemis-%%PORTVERSION%%/nsdb/QualifierParse.java
artemis-%%PORTVERSION%%/nsdb/QualifierParseHelper.class
artemis-%%PORTVERSION%%/nsdb/QualifierParseHelper.java
artemis-%%PORTVERSION%%/nsdb/QualifierParseHolder.java
artemis-%%PORTVERSION%%/nsdb/ReadOnlyException.class
artemis-%%PORTVERSION%%/nsdb/ReadOnlyException.java
artemis-%%PORTVERSION%%/nsdb/ReadOnlyExceptionHelper.class
artemis-%%PORTVERSION%%/nsdb/ReadOnlyExceptionHelper.java
artemis-%%PORTVERSION%%/nsdb/ReadOnlyExceptionHolder.java
artemis-%%PORTVERSION%%/nsdb/ServerInfo.class
artemis-%%PORTVERSION%%/nsdb/ServerInfo.java
artemis-%%PORTVERSION%%/nsdb/ServerInfoHelper.class
artemis-%%PORTVERSION%%/nsdb/ServerInfoHelper.java
artemis-%%PORTVERSION%%/nsdb/ServerInfoHolder.java
artemis-%%PORTVERSION%%/nsdb/_EmblSeqStub.class
artemis-%%PORTVERSION%%/nsdb/_EmblSeqStub.java
artemis-%%PORTVERSION%%/nsdb/_EmblSeqWriterStub.class
artemis-%%PORTVERSION%%/nsdb/_EmblSeqWriterStub.java
artemis-%%PORTVERSION%%/nsdb/_EmblStub.class
artemis-%%PORTVERSION%%/nsdb/_EmblStub.java
artemis-%%PORTVERSION%%/nsdb/_EmblWriterStub.class
artemis-%%PORTVERSION%%/nsdb/_EmblWriterStub.java
artemis-%%PORTVERSION%%/nsdb/_EntryInfoStub.java
artemis-%%PORTVERSION%%/nsdb/_FeatureLocationStub.class
artemis-%%PORTVERSION%%/nsdb/_FeatureLocationStub.java
artemis-%%PORTVERSION%%/nsdb/_LocationStub.class
artemis-%%PORTVERSION%%/nsdb/_LocationStub.java
artemis-%%PORTVERSION%%/nsdb/_NucFeatureStub.class
artemis-%%PORTVERSION%%/nsdb/_NucFeatureStub.java
artemis-%%PORTVERSION%%/nsdb/_NucFeatureWriterStub.class
artemis-%%PORTVERSION%%/nsdb/_NucFeatureWriterStub.java
artemis-%%PORTVERSION%%/nsdb/_NucSeqStub.java
artemis-%%PORTVERSION%%/nsdb/datestamp_tHelper.class
artemis-%%PORTVERSION%%/nsdb/datestamp_tHelper.java
artemis-%%PORTVERSION%%/seqdb/BioSeq.class
artemis-%%PORTVERSION%%/seqdb/BioSeq.java
artemis-%%PORTVERSION%%/seqdb/BioSeqHelper.java
artemis-%%PORTVERSION%%/seqdb/BioSeqHolder.java
artemis-%%PORTVERSION%%/seqdb/BioSeqOperations.class
artemis-%%PORTVERSION%%/seqdb/BioSeqOperations.java
artemis-%%PORTVERSION%%/seqdb/Feature.class
artemis-%%PORTVERSION%%/seqdb/Feature.java
artemis-%%PORTVERSION%%/seqdb/FeatureHelper.java
artemis-%%PORTVERSION%%/seqdb/FeatureHolder.java
artemis-%%PORTVERSION%%/seqdb/FeatureOperations.class
artemis-%%PORTVERSION%%/seqdb/FeatureOperations.java
artemis-%%PORTVERSION%%/seqdb/SeqInfo.class
artemis-%%PORTVERSION%%/seqdb/SeqInfo.java
artemis-%%PORTVERSION%%/seqdb/SeqInfoHelper.java
artemis-%%PORTVERSION%%/seqdb/SeqInfoHolder.java
artemis-%%PORTVERSION%%/seqdb/SeqInfoOperations.class
artemis-%%PORTVERSION%%/seqdb/SeqInfoOperations.java
artemis-%%PORTVERSION%%/seqdb/_BioSeqStub.java
artemis-%%PORTVERSION%%/seqdb/_FeatureStub.java
artemis-%%PORTVERSION%%/seqdb/_SeqInfoStub.java
artemis-%%PORTVERSION%%/type/AminoAcid.class
artemis-%%PORTVERSION%%/type/AminoAcid.java
artemis-%%PORTVERSION%%/type/AminoAcidHelper.class
artemis-%%PORTVERSION%%/type/AminoAcidHelper.java
artemis-%%PORTVERSION%%/type/AminoAcidHolder.java
artemis-%%PORTVERSION%%/type/AminoAcidListHelper.java
artemis-%%PORTVERSION%%/type/AminoAcidListHolder.java
artemis-%%PORTVERSION%%/type/AntiCodon.class
artemis-%%PORTVERSION%%/type/AntiCodon.java
artemis-%%PORTVERSION%%/type/AntiCodonHelper.class
artemis-%%PORTVERSION%%/type/AntiCodonHelper.java
artemis-%%PORTVERSION%%/type/AntiCodonHolder.java
artemis-%%PORTVERSION%%/type/AntiCodonListHelper.java
artemis-%%PORTVERSION%%/type/AntiCodonListHolder.java
artemis-%%PORTVERSION%%/type/Between_ftc.java
artemis-%%PORTVERSION%%/type/CodonTranslation.class
artemis-%%PORTVERSION%%/type/CodonTranslation.java
artemis-%%PORTVERSION%%/type/CodonTranslationHelper.class
artemis-%%PORTVERSION%%/type/CodonTranslationHelper.java
artemis-%%PORTVERSION%%/type/CodonTranslationHolder.java
artemis-%%PORTVERSION%%/type/CodonTranslationListHelper.java
artemis-%%PORTVERSION%%/type/CodonTranslationListHolder.java
artemis-%%PORTVERSION%%/type/Date.class
artemis-%%PORTVERSION%%/type/Date.java
artemis-%%PORTVERSION%%/type/DateHelper.class
artemis-%%PORTVERSION%%/type/DateHelper.java
artemis-%%PORTVERSION%%/type/DateHolder.java
artemis-%%PORTVERSION%%/type/DateListHelper.java
artemis-%%PORTVERSION%%/type/DateListHolder.java
artemis-%%PORTVERSION%%/type/DbXref.class
artemis-%%PORTVERSION%%/type/DbXref.java
artemis-%%PORTVERSION%%/type/DbXrefHelper.class
artemis-%%PORTVERSION%%/type/DbXrefHelper.java
artemis-%%PORTVERSION%%/type/DbXrefHolder.java
artemis-%%PORTVERSION%%/type/DbXrefListHelper.class
artemis-%%PORTVERSION%%/type/DbXrefListHelper.java
artemis-%%PORTVERSION%%/type/DbXrefListHolder.java
artemis-%%PORTVERSION%%/type/Exact_ftc.java
artemis-%%PORTVERSION%%/type/Fuzzy.class
artemis-%%PORTVERSION%%/type/Fuzzy.java
artemis-%%PORTVERSION%%/type/FuzzyHelper.class
artemis-%%PORTVERSION%%/type/FuzzyHelper.java
artemis-%%PORTVERSION%%/type/FuzzyHolder.java
artemis-%%PORTVERSION%%/type/FuzzyListHelper.java
artemis-%%PORTVERSION%%/type/FuzzyListHolder.java
artemis-%%PORTVERSION%%/type/FuzzyTypeCodeHelper.class
artemis-%%PORTVERSION%%/type/FuzzyTypeCodeHelper.java
artemis-%%PORTVERSION%%/type/Greater_ftc.java
artemis-%%PORTVERSION%%/type/In_ftc.java
artemis-%%PORTVERSION%%/type/IndexOutOfRange.class
artemis-%%PORTVERSION%%/type/IndexOutOfRange.java
artemis-%%PORTVERSION%%/type/IndexOutOfRangeHelper.class
artemis-%%PORTVERSION%%/type/IndexOutOfRangeHelper.java
artemis-%%PORTVERSION%%/type/IndexOutOfRangeHolder.java
artemis-%%PORTVERSION%%/type/InvalidArgumentValue.class
artemis-%%PORTVERSION%%/type/InvalidArgumentValue.java
artemis-%%PORTVERSION%%/type/InvalidArgumentValueHelper.class
artemis-%%PORTVERSION%%/type/InvalidArgumentValueHelper.java
artemis-%%PORTVERSION%%/type/InvalidArgumentValueHolder.java
artemis-%%PORTVERSION%%/type/InvalidRelation.class
artemis-%%PORTVERSION%%/type/InvalidRelation.java
artemis-%%PORTVERSION%%/type/InvalidRelationHelper.class
artemis-%%PORTVERSION%%/type/InvalidRelationHelper.java
artemis-%%PORTVERSION%%/type/InvalidRelationHolder.java
artemis-%%PORTVERSION%%/type/Less_ftc.java
artemis-%%PORTVERSION%%/type/NoResult.class
artemis-%%PORTVERSION%%/type/NoResult.java
artemis-%%PORTVERSION%%/type/NoResultHelper.class
artemis-%%PORTVERSION%%/type/NoResultHelper.java
artemis-%%PORTVERSION%%/type/NoResultHolder.java
artemis-%%PORTVERSION%%/type/NoWritePermission.java
artemis-%%PORTVERSION%%/type/NoWritePermissionHelper.java
artemis-%%PORTVERSION%%/type/NoWritePermissionHolder.java
artemis-%%PORTVERSION%%/type/ParseError.java
artemis-%%PORTVERSION%%/type/ParseErrorHelper.java
artemis-%%PORTVERSION%%/type/ParseErrorHolder.java
artemis-%%PORTVERSION%%/type/Person.java
artemis-%%PORTVERSION%%/type/PersonHelper.java
artemis-%%PORTVERSION%%/type/PersonHolder.java
artemis-%%PORTVERSION%%/type/PersonListHelper.java
artemis-%%PORTVERSION%%/type/PersonListHolder.java
artemis-%%PORTVERSION%%/type/RepeatUnit.class
artemis-%%PORTVERSION%%/type/RepeatUnit.java
artemis-%%PORTVERSION%%/type/RepeatUnitHelper.class
artemis-%%PORTVERSION%%/type/RepeatUnitHelper.java
artemis-%%PORTVERSION%%/type/RepeatUnitHolder.java
artemis-%%PORTVERSION%%/type/RepeatUnitListHelper.java
artemis-%%PORTVERSION%%/type/RepeatUnitListHolder.java
artemis-%%PORTVERSION%%/type/Revision.class
artemis-%%PORTVERSION%%/type/Revision.java
artemis-%%PORTVERSION%%/type/RevisionHelper.class
artemis-%%PORTVERSION%%/type/RevisionHelper.java
artemis-%%PORTVERSION%%/type/RevisionHolder.java
artemis-%%PORTVERSION%%/type/RevisionListHelper.class
artemis-%%PORTVERSION%%/type/RevisionListHelper.java
artemis-%%PORTVERSION%%/type/RevisionListHolder.java
artemis-%%PORTVERSION%%/type/SpliceConsensus.class
artemis-%%PORTVERSION%%/type/SpliceConsensus.java
artemis-%%PORTVERSION%%/type/SpliceConsensusHelper.class
artemis-%%PORTVERSION%%/type/SpliceConsensusHelper.java
artemis-%%PORTVERSION%%/type/SpliceConsensusHolder.java
artemis-%%PORTVERSION%%/type/SpliceConsensusListHelper.java
artemis-%%PORTVERSION%%/type/SpliceConsensusListHolder.java
artemis-%%PORTVERSION%%/type/TranslationException.class
artemis-%%PORTVERSION%%/type/TranslationException.java
artemis-%%PORTVERSION%%/type/TranslationExceptionHelper.class
artemis-%%PORTVERSION%%/type/TranslationExceptionHelper.java
artemis-%%PORTVERSION%%/type/TranslationExceptionHolder.java
artemis-%%PORTVERSION%%/type/TranslationExceptionListHelper.java
artemis-%%PORTVERSION%%/type/TranslationExceptionListHolder.java
artemis-%%PORTVERSION%%/type/longListHelper.java
artemis-%%PORTVERSION%%/type/longListHolder.java
artemis-%%PORTVERSION%%/type/stringListHelper.class
artemis-%%PORTVERSION%%/type/stringListHelper.java
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artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/PublicDBStreamFeature.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/PublicDBStreamFeature.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/Qualifier.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/Qualifier.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfo.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfo.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfoException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfoException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfoHash.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfoHash.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfoVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierInfoVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierLazyLoading.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierLazyLoading.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierParseException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierParseException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/QualifierVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RWCorbaEntry$1.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RWCorbaEntry.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RWCorbaEntry.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RWCorbaFeature.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RWCorbaFeature.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/Range.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/Range.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RangeVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RangeVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RawStreamSequence.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/RawStreamSequence.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadEvent.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadEvent.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadFormatException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadFormatException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadListener.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadListener.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadOnlyEmblStreamFeature.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadOnlyEntry.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/ReadOnlyEntry.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/Sequence.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/Sequence.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleDocumentEntry$1.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleDocumentEntry.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleDocumentEntry.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleDocumentFeature.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleDocumentFeature.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleEntryInformation.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/SimpleEntryInformation.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamFeature.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamFeature.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamFeatureTable.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamFeatureTable.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamQualifier.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamQualifier.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamSequence.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamSequence.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamSequenceFactory.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/StreamSequenceFactory.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/UpperInteger.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/io/UpperInteger.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/FTProgress.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/FTProgress.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/FileTransferProgressMonitor.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/FileTransferProgressMonitor.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshFileManager$SshGet.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshFileManager.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshFileManager.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshLogin.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshLogin.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshPSUClient$StdoutStdErrHandler.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshPSUClient.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/j2ssh/SshPSUClient.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/AGWindowAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/AGWindowAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/ATDeviationAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/ATDeviationAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/Algorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/Algorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/BaseAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/BaseAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CSCSAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CSCSAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/Codon12CorrelationAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/Codon12CorrelationAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonUsageAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonUsageAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonUsageFormatException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonUsageFormatException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonUsageWeight.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonUsageWeight.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonWeight.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CodonWeight.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CoilFeatureAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CoilFeatureAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CumulativeATSkewAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CumulativeATSkewAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CumulativeGCSkewAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/CumulativeGCSkewAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/EntropyAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/EntropyAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/FeatureAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/FeatureAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCDeviationAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCDeviationAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCFrameAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCFrameAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCSDWindowAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCSDWindowAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCWindowAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/GCWindowAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/HydroAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/HydroAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/HydrophilicityAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/HydrophilicityAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/HydrophobicityAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/HydrophobicityAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/ICDIAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/ICDIAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/KarlinSigAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/KarlinSigAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/MRIAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/MRIAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/NcAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/NcAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/PositionalAsymmetryAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/PositionalAsymmetryAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/ScaledChiAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/ScaledChiAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/UserDataAlgorithm.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/plot/UserDataAlgorithm.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/AminoAcidSequence.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/AminoAcidSequence.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/BasePattern.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/BasePattern.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/BasePatternFormatException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/BasePatternFormatException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/Bases.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/Bases.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/Marker.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/Marker.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerChangeEvent.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerChangeEvent.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerChangeListener.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerChangeListener.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerInternal.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerRange.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerRange.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerRangeVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/MarkerRangeVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/NoSequenceException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/NoSequenceException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/SequenceChangeEvent.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/SequenceChangeEvent.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/SequenceChangeListener.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/SequenceChangeListener.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/Strand.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/sequence/Strand.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/ByteBuffer.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/ByteBuffer.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/DatabaseDocument.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/DatabaseDocument.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/Document.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/Document.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/DocumentFactory.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/DocumentFactory.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/FastVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/FastVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/FileDocument.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/FileDocument.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/InputStreamProgressEvent.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/InputStreamProgressEvent.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/InputStreamProgressListener.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/InputStreamProgressListener.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/InputStreamProgressListenerVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/InputStreamProgressListenerVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/LinePushBackReader.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/LinePushBackReader.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/OutOfRangeException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/OutOfRangeException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/ProgressInputStream.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/ProgressInputStream.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/PushBackException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/PushBackException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/ReadOnlyException.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/ReadOnlyException.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/RemoteFileDocument$1.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/RemoteFileDocument.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/RemoteFileDocument.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/StringVector$1.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/StringVector.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/StringVector.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/TextDocument.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/TextDocument.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/URLDocument.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/URLDocument.java
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/WorkingGZIPInputStream.class
artemis-%%PORTVERSION%%/uk/ac/sanger/artemis/util/WorkingGZIPInputStream.java
bin/act
bin/art
@dir artemis-%%PORTVERSION%%/uk/ac/sanger/ibatis