Fernando Apesteguía 88963ff54f science/afni: update to 21.3.12		2021-12-20 14:10:18 +01:00
..
2d-rewriter
abinit
afni	science/afni: update to 21.3.12	2021-12-20 14:10:18 +01:00
agrum
aircraft-datcom
ALPSCore
antioch	science/metaphysicl: Update 1.3.1 -> 1.3.2	2021-11-25 13:46:02 -08:00
apbs
ascent
atompaw
avogadro2
avogadrolibs
axom	science/axom: Broken on i386	2021-12-07 00:58:36 -08:00
bagel
bddsolve
berkeleygw
bodr
buddy
cantera	science/cantera: Add the OCTAVE option	2021-12-19 14:17:41 -08:00
cdcl
cdf
cdk
cdo	science/cdo: Update to 2.0.0	2021-11-06 07:53:48 +08:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemps2
chemtool
chemtool-devel
chrono
clhep
clipper
code_saturne	science/code_saturne: upgrade to 7.0.2	2021-10-18 22:17:32 +02:00
colt
conduit
coordgenlibs
cp2k
cp2k-data
crf++
csvtk	science/csvtk: Update to 0.24.0	2021-11-30 18:00:16 -06:00
dakota	science/dakota: fix build on non-x86	2021-10-22 11:42:25 +00:00
dalton
dcl
devisor
dftbplus
dkh
dlib-cpp
drawxtl
dvc
dynare	science/dynare: Update instructions in pkg-message.	2021-12-19 23:48:50 -08:00
eccodes
elk
elmerfem	math/vtk9: Update 9.0.3 -> 9.1.0	2021-11-22 01:40:34 -08:00
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
fisicalab
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gchemutils
gdma
getdp
ghemical
ghmm
gnudatalanguage	science/gnudatalanguage: prepare to proj8	2021-11-18 06:17:26 +01:00
gpaw-setups
gramps
grib_api
gromacs	science/gromacs: Update 2021.3 -> 2021.4	2021-11-08 01:05:21 -08:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
healpix
helfem
hepmc3
highfive
hypre	science/hypre: fix build on powerpc64*	2021-11-07 12:15:02 +00:00
iboview
InsightToolkit
isaac-cfd
jdftx
jmol	science/jmol: Update 14.31.61 -> 14.31.62	2021-11-25 11:50:29 -08:00
jstrack
kalzium	KDE: Update KDE Gear to 21.12	2021-12-10 07:26:32 +01:00
kim-api
kst2
lammps
lamprop
latte
libaec
libccp4
libcint	science/libcint: Update 4.4.4 -> 4.4.6	2021-10-16 15:21:14 -07:00
libctl
libecpint	science/libecpint: Update 1.0.6 -> 1.0.7	2021-12-14 14:41:53 -08:00
libefp
libgeodecomp
libghemical
libgridxc
libint
libint2	science/libint2: Update 2.6.0 -> 2.7.1	2021-11-06 16:56:36 -07:00
libkml
liblinear
libmsym
liboglappth	*: fix tab vs. space issues, and comments according to the guide.	2021-10-16 11:51:39 +02:00
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
linux-zotero	science/linux-zotero: Clean up	2021-11-08 00:33:54 +01:00
luscus
madness
maeparser
massxpert
mbdyn	science/mbdyn: fix build on powerpc64*	2021-11-08 15:52:33 +00:00
mcstas
mcstas-comps
mcxtrace
mcxtrace-comps
mdynamix
medit
metaphysicl	science/metaphysicl: Update 1.3.2 -> 1.3.3	2021-12-13 09:19:09 -08:00
minc2	*/*: Remove redundant '-[0-9]*' from CONFLICTS	2021-10-29 11:50:18 +02:00
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch
mpb
mpqc	science/mpqc: regen plist after doxygen update (+)	2021-12-16 11:49:52 +03:00
msms	Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.)	2021-10-25 12:58:29 +00:00
multiwfn
namd	Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.)	2021-10-25 12:58:29 +00:00
nest	science/nest: Update 2.20.1 -> 3.1	2021-10-20 23:23:16 -07:00
netcdf
netcdf-cxx
netcdf-fortran
nifticlib	*/*: Remove redundant '-[0-9]*' from CONFLICTS	2021-10-29 11:50:18 +02:00
nwchem	science/nwchem: Update 7.0.2.20211109 -> 7.0.2.20211110	2021-11-12 11:02:09 -08:00
nwchem-data
octopus
openbabel	*/*: Remove redundant '-*' from CONFLICTS definitions	2021-11-25 22:40:11 +01:00
openems	science/openems: Only works on amd64 and powerpc64.	2021-11-14 16:31:37 +01:00
openkim
openkim-models
openmc
openmx
opensim-core
opensph	misc/openvdb: Update 8.1.0 -> 9.0.0	2021-11-14 21:18:52 -08:00
opsin
orthanc	devel/jsoncpp: Update to 1.9.4 -> 1.9.5	2021-11-05 12:09:19 -07:00
orthanc-dicomweb	devel/jsoncpp: Update to 1.9.4 -> 1.9.5	2021-11-05 12:09:19 -07:00
orthanc-mysql	devel/jsoncpp: Update to 1.9.4 -> 1.9.5	2021-11-05 12:09:19 -07:00
orthanc-postgresql	devel/jsoncpp: Update to 1.9.4 -> 1.9.5	2021-11-05 12:09:19 -07:00
orthanc-webviewer	devel/jsoncpp: Update to 1.9.4 -> 1.9.5	2021-11-05 12:09:19 -07:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements	science/p5-Chemistry-Elements: Update to 1.075	2021-11-06 03:15:55 +08:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-WebService-Elevation-USGS	science/p5-Geo-WebService-Elevation-USGS: Update to 0.120	2021-11-06 03:15:56 +08:00
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2
paje
pcmsolver
PETSc
phonopy
plumed
pnetcdf
pulseview
py-abipy
py-access
py-asdf	science/py-asdf: Update USES=python	2021-11-06 03:14:23 +08:00
py-ase
py-avogadrolibs
py-cdo
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core	science/py-cirq-core: Update 0.12.0 -> 0.13.1	2021-11-14 16:27:22 -08:00
py-cirq-google	science/py-cirq-google: Update 0.12.0 -> 0.13.0	2021-10-17 08:49:41 -07:00
py-cirq-ionq	science/py-cirq-ionq: Update 0.12.0 -> 0.13.1	2021-10-31 10:23:17 -07:00
py-cirq-pasqal	science/py-cirq-pasqal: Update 0.13.0 -> 0.13.1	2021-10-31 10:23:18 -07:00
py-coards
py-DendroPy
py-dipy
py-dlib
py-eccodes	science/py-eccodes: Add NO_ARCH	2021-11-02 05:28:49 +08:00
py-esda
py-geolinks
py-geomet
py-geometer	science/py-geometer: Fix 89c2dfb9ad	2021-11-01 21:41:50 +08:00
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py	science/py-h5py: Update to 3.6.0	2021-11-22 05:15:52 +08:00
py-hiphive
py-inequality	science/py-inequality: Update USES=python	2021-11-06 03:14:23 +08:00
py-jupyter_jsmol
py-kim-query
py-kinematics	science/py-kinematics: Update USES=python	2021-11-06 03:14:24 +08:00
py-kliff
py-liac-arff
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mmtf-python
py-molmod
py-moltemplate
py-netCDF4
py-netcdf-flattener
py-nibabel
py-nilearn
py-obspy
py-oddt
py-OpenFermion	science/py-OpenFermion: Update 1.1.0 -> 1.2.0	2021-10-22 01:57:02 -07:00
py-OpenMC
py-openpiv	science/py-openpiv: update to 0.23.8	2021-11-06 00:17:44 +03:00
py-paida
py-paramz
py-phono3py
py-phonopy
py-PubChemPy
py-pupynere	science/py-pupynere: Update USES=python	2021-11-06 03:14:24 +08:00
py-pyaixi
py-pyberny	science/py-pyberny: New port: Optimizer of molecular geometries with respect to the total energy	2021-10-16 16:56:19 -07:00
py-pycsw	science/py-pycsw: Update to 2.6.1	2021-10-25 23:57:35 +08:00
py-pydicom
py-PyFR	science/py-PyFR: Update 1.12.2 -> 1.12.3	2021-11-21 16:50:13 -08:00
py-pygeodesy
py-pygeometa
py-pygmo2
py-pyked	devel/py-pint: Update to 0.18	2021-11-01 21:41:43 +08:00
py-pymatgen	science/py-pymatgen: Update 2022.0.14 -> 2022.0.15	2021-10-22 08:58:25 -07:00
py-pymol
py-PyNE
py-pyosf
py-pysal
py-pyscf	science/py-pyscf: Update 2.0.0a-103 -> 2.0.1	2021-11-16 14:41:36 -08:00
py-pyteomics
py-qcelemental	science/py-qcelemental: Update 0.23.0 -> 0.24.0	2021-11-19 13:33:17 -08:00
py-qcengine	science/py-qcengine: Update 0.20.1 -> 0.21.0	2021-11-26 21:26:07 -08:00
py-qspin
py-quantities
py-rmf	*: apply refactor.remove-consecutive-empty-lines	2021-10-19 10:36:47 +02:00
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize	science/py-scikit-optimize: Update to 0.9.0	2021-10-25 23:57:36 +08:00
py-scikit-sparse
py-scimath
py-scipy	science/py-scipy: Update to 1.7.1	2021-11-08 11:08:59 +08:00
py-scoria
py-segregation
py-segyio	science/{,py-}segyio: Update 1.9.7 -> 1.9.8	2021-11-06 16:56:38 -07:00
py-SimpleSpectral
py-skrebate	science/py-skrebate: Update USES=python	2021-11-06 03:14:24 +08:00
py-spaghetti
py-spglib
py-tensorflow	devel/jsoncpp: Update to 1.9.4 -> 1.9.5	2021-11-05 12:09:19 -07:00
py-tobler
py-veusz
pybrain
pynn	science/pynn: Update to 0.10.0	2021-12-17 16:18:50 +08:00
qbox
qcl
qiskit-aer
qmcpack
quantum-espresso
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-snow	science/R-cran-snow: Update to 0.4-4	2021-10-28 10:20:03 +00:00
R-cran-som
R-cran-udunits2	science/R-cran-udunits2: Update to 0.13.1	2021-11-06 13:18:07 +00:00
rdkit
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4	science/rubygem-rgeo-proj4: Update to 3.1.1	2021-11-22 02:24:31 +08:00
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis
segyio	science/{,py-}segyio: Update 1.9.7 -> 1.9.8	2021-11-06 16:56:38 -07:00
shelxle	science/shelxle: Update 1.0.1346 -> 1.0.1348	2021-12-14 14:41:46 -08:00
siconos
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simsmith
smoldyn	science/smoldyn: Update 2.66 -> 2.67	2021-11-06 16:56:37 -07:00
sparta	science/sparta: Update 26Feb2021 -> 20Oct2021	2021-10-20 23:23:15 -07:00
spglib
step	KDE: Update KDE Gear to 21.12	2021-12-10 07:26:32 +01:00
svmlight	science/svmlight: fix build on 13.0+	2021-10-29 18:01:10 +00:00
szip
teem
tfel
tfel-edf
thermofun
tinker
udunits
v_sim
vipster
vmd
voro++
votca
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden	framework: Add new USES 'magick' for graphics/ImageMagick*	2021-12-11 14:50:53 +01:00
xdrawchem
xtb	science/xtb: update to 6.4.1	2021-11-27 11:49:53 -06:00
yoda
Makefile	science/linux-zotero: Add new port	2021-11-03 17:20:36 +01:00