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SRA tools is a toolkit for using data in the INSDC Sequence Read Archives. SRAs operated by International Nucleotide Sequence Database Collaboration houses sequence reads and alignments generated by "next-gen" sequencers. This port is a bit convoluted due to the fact that the sra-tools build requires access to the ncbi-vdb source tree. Hence, ncbi-vdb is treated as a submodule here rather than a separate library port. We are working with upstream with hope for long-term improvements.
12 lines
239 B
C
12 lines
239 B
C
--- tools/fastq-loader/spot-assembler.c.orig 2021-06-20 17:00:29 UTC
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+++ tools/fastq-loader/spot-assembler.c
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@@ -26,6 +26,8 @@
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#include "spot-assembler.h"
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+#include <sys/stat.h>
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+
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#include <klib/status.h>
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#include <klib/printf.h>
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