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freebsd-ports/science
History
Thierry Thomas 3d2ad7d3f8 - Upgrade to 5.6.5; 
- Install libabinit;

- Handle NOPORTDOCS and NOPORTEXAMPLES;

- s/test/regression-test/;

- Don't install under a versionned $PREFIX.

Approved by:	maho (maintainer)
2009-03-23 18:27:37 +00:00
..
2d-rewriter - Update to 1.3. 2008-06-20 23:47:43 +00:00
2dhf Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
abinit - Upgrade to 5.6.5; 2009-03-23 18:27:37 +00:00
afni Fix science/afni after X.org 7.4 import (needs Xi). 2009-01-24 10:02:09 +00:00
at Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
bblimage
bft Upgrade to 1.0.8. 2009-01-26 17:52:44 +00:00
bodr
brian Brian is a simulator for spiking neural networks available on almost all 2009-03-16 06:07:37 +00:00
buddy Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script. 2008-08-21 06:18:49 +00:00
cdcl - Fix typo (CUNFIGURE_ARGS) 2008-10-02 19:51:35 +00:00
cdf - Pass maintainership along. 2009-02-13 15:25:26 +00:00
cdo - Update to 1.3.0 2009-02-01 09:54:29 +00:00
cgnslib Switch to USE_FORTRAN. 2009-01-10 14:49:34 +00:00
chemical-mime-data Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
chemtool Update to 1.6.11. 2009-03-17 08:20:04 +00:00
chemtool-devel Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
clhep - Use my FreeBSD address on the ports I maintain 2009-03-06 18:14:36 +00:00
colt Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
crf++ - Desupport FreeBSD 4.x 2008-07-25 14:29:20 +00:00
dcl - Use USE_FORTRAN knob 2009-01-20 08:24:11 +00:00
devisor Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
dft++ Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
dtiquery Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
ecs Upgrade to 1.3.3. 2009-01-26 17:52:55 +00:00
elmer-eio - No longer pass FC, F77 and FFLAGS to CONFIGURE_ENV; this is now 2009-01-20 17:35:18 +00:00
elmer-fem - We need use FCFLAGS to build it in AMD64 and IA64. 2009-01-21 00:36:06 +00:00
elmer-hutiter - No longer pass FC, F77 and FFLAGS to CONFIGURE_ENV; this is now 2009-01-20 17:35:18 +00:00
elmer-matc Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
elmer-meshgen2d - Mark as UNBROKEN on AMD64. 2009-02-20 01:35:46 +00:00
elmerfront - Mark BROKEN: does not compile (../include/ecif_userinterface_TCL.h:41:17: 2009-03-13 14:25:43 +00:00
elmergrid Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script. 2008-08-21 06:18:49 +00:00
elmerpost Mark broken: fails to compile on i386 and sparc64. 2009-03-16 08:43:58 +00:00
euler Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
fastcap
fasthenry
felt
flounder - Update X.org ports to 7.4+ (few ports are more recent than the katamari). 2009-01-23 16:28:36 +00:00
fvm Upgrade to 0.12.0. 2009-01-26 17:52:46 +00:00
g3data Update to 1.5.3. 2009-01-12 20:21:31 +00:00
gamess Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
gave Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
gchemutils Chase the goffice update. 2009-02-24 02:18:50 +00:00
gdis Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
gerris - Update to 0.9.2 2009-01-14 09:12:31 +00:00
getdp - Pass maintainership along. 2009-02-13 15:25:26 +00:00
ghemical Fix build with gcc43. 2009-02-17 07:25:59 +00:00
ghmm
gnudatalanguage - Update ImageMagick to 6.4.9.2 2009-02-10 19:50:55 +00:00
gramps Fix plist. 2008-12-22 10:58:03 +00:00
gromacs Mark as broken on sparc64: fails to compile. 2009-03-16 09:35:28 +00:00
gsmc Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
gsystem Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
gtamsanalyzer - add LICENSE: 2009-01-16 17:22:52 +00:00
gwyddion Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
hdf - Fix shlib symlink 2009-01-15 22:33:30 +00:00
hdf5 Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
hdf5-18 Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
ics Upgrade to 1.3.3. 2009-01-26 17:52:55 +00:00
InsightToolkit
isaac-cfd Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
jmol - Update to 11.6.17 2009-03-16 21:42:23 +00:00
kmovisto Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script. 2008-08-21 06:18:49 +00:00
kst Use my @FreeBSD.org email for the rest of my ports 2009-02-21 11:31:28 +00:00
kst2 Use my @FreeBSD.org email for the rest of my ports 2009-02-21 11:31:28 +00:00
lamprop
libctl - Mark BROKEN on FreeBSD 6.x, does not compile 2009-03-02 21:36:12 +00:00
libghemical Fix build with gcc43. 2009-02-14 08:07:13 +00:00
libint Update to 1.1.4 2009-02-02 02:53:05 +00:00
liblinear - Update to 1.33 2008-12-22 15:49:16 +00:00
liboglappth - Update X.org ports to 7.4+ (few ports are more recent than the katamari). 2009-01-23 16:28:36 +00:00
libsvm - Update description to reflect reality 2009-02-25 02:30:35 +00:00
libsvm-python
linsmith Update my email address to @FreeBSD.org. 2009-01-28 23:25:21 +00:00
mayavi
mbdyn Mark BROKEN. 2009-02-07 16:38:30 +00:00
mcstas Bump portrevision due to upgrade of devel/gettext. 2008-06-06 14:17:21 +00:00
medit - Update X.org ports to 7.4+ (few ports are more recent than the katamari). 2009-01-23 16:28:36 +00:00
minc Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script. 2008-08-21 06:18:49 +00:00
minc2 Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script. 2008-08-21 06:18:49 +00:00
mpb - Chase lang/guile shlib bump 2009-01-22 16:04:11 +00:00
mpqc Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
mpqc-mpich
ncs Fix plist with -DNOPORTDOCS. 2009-03-16 22:34:19 +00:00
netcdf - Fix Fortran linking 2009-03-22 22:09:27 +00:00
netcdf4 - Remove unused pkgmessage. 2009-01-02 07:50:54 +00:00
netcdf-ftn - Fix Fortran linking 2009-03-22 22:09:27 +00:00
nifticlib
oases Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
omnetpp - Change default Tcl/Tk version to 8.5 2009-02-23 14:46:37 +00:00
oof Mark unconditionally BROKEN, EXPIRATION_DATE=2009-03-22. 2009-02-22 01:31:20 +00:00
openbabel Use my @FreeBSD.org email for the rest of my ports 2009-02-21 11:31:28 +00:00
openfoam - Mark BROKEN: bad depobj in java3d line 2009-01-06 21:36:22 +00:00
ovt - Fix build with jdk16 2008-09-06 16:26:10 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-Elements - update to 1.07 2008-09-02 09:46:03 +00:00
p5-Geo-ReadGRIB Geo::ReadGRIB is an object Perl module that provides read 2009-03-22 15:18:46 +00:00
paje - add LICENSE: 2009-01-16 17:22:52 +00:00
paraview - Update X.org ports to 7.4+ (few ports are more recent than the katamari). 2009-01-23 16:28:36 +00:00
pcp
pnetcdf Leverage USE_FORTRAN instead of accomplishing the same manually. 2009-01-18 20:17:31 +00:00
psi3 Fix build with gcc43. 2009-02-14 08:36:17 +00:00
psychopy PsychoPy is an open-source package for creating psychology stimuli 2009-02-28 19:58:19 +00:00
py-hcluster - Update to 0.2.0 2008-12-22 21:10:33 +00:00
py-mdp - Update to 2.4 2008-12-11 19:22:08 +00:00
py-netCDF4 netCDF version 4 has many features not found in earlier versions of the 2009-02-23 20:18:45 +00:00
py-openbabel Use my @FreeBSD.org email for the rest of my ports 2009-02-21 11:31:28 +00:00
py-paida - Update to 3.2.1.2.10 2008-07-18 20:45:17 +00:00
py-pydicom pydicom is a pure python package for working with DICOM files. It was 2009-01-16 00:09:20 +00:00
py-scipy - Update to 0.7.0 2009-02-28 19:54:59 +00:00
pycdf
pyvox
qcl
ruby-dcl - update to 1.6.0 2009-01-08 17:11:08 +00:00
ruby-gphys - fix inappropriate use of NO* vars 2009-01-08 17:13:47 +00:00
ruby-netcdf
silo Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3. 2009-01-07 16:34:27 +00:00
simlib - Set NOT_FOR_ARCHS for sparc64 2008-09-16 09:18:28 +00:00
svmlight - Update patch distribution site and fix patch procedure 2008-09-11 13:43:56 +00:00
szip - Distfile rerolled with minor change to configure script 2009-01-30 22:25:07 +00:00
udunits . Update to 1.12.9. 2009-01-20 05:44:41 +00:00
v_sim Upgrade to version 3.4.3. 2009-03-07 08:36:35 +00:00
vis5d+ Do not explicitly pass F77 and FFLAGS to CONFIGURE_ENV, this is now done 2009-01-18 03:42:53 +00:00
vmd
x11iraf
xloops-ginac Conversion from (now defunct) autoconf-2.61 to autoconf-2.62 2008-08-20 00:57:32 +00:00
xmakemol - Update X.org ports to 7.4+ (few ports are more recent than the katamari). 2009-01-23 16:28:36 +00:00
xmds
Makefile - Fix Fortran linking 2009-03-22 22:09:27 +00:00