Thierry Thomas f198956ce9 Fix build with clang.		2013-06-12 20:03:25 +00:00
..
2d-rewriter
2dhf
abinit	Rectify USE_TEX to support both of teTeX and TeXLive.	2013-05-11 17:58:55 +00:00
afni	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
avogadro	- Backout previous commit	2013-05-15 05:16:51 +00:00
bddsolve
bft	Upgrade Code_Saturne to 2.0.	2012-07-07 15:15:56 +00:00
bodr
brian	- Update to 1.4.0	2012-09-04 07:13:08 +00:00
buddy
cdcl	Update to 5.4.7	2012-12-19 03:01:41 +00:00
cdf
cdo	- Update to 1.6.0	2013-06-08 21:49:40 +00:00
cgnslib	- Fix build with Tcl/Tk 8.6	2013-06-04 09:33:05 +00:00
checkmol	- worked with upstream to roll versioned source distfile	2013-06-01 05:10:39 +00:00
chemical-mime-data
chemtool
chemtool-devel	- Convert USE_GETTEXT to USES (part 3)	2013-04-24 18:10:30 +00:00
clhep
colt	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
crf++
dcl	- Update to 5.4.7	2012-12-13 02:25:38 +00:00
devisor	Style: tab -> space.	2013-03-28 16:28:59 +00:00
dlpoly-classic	Convert science to new options framework	2013-04-28 22:08:22 +00:00
dtiquery
ecs	WITHOUT_NLS -> PORT_OPTIONS:MNLS	2013-06-04 14:40:29 +00:00
elmer-eio
elmer-hutiter
elmer-matc
elmer-meshgen2d
elmergrid
elmerpost
epte	- Update to 2.0.8	2012-08-06 07:19:41 +00:00
euler	Fix build with bmake	2013-05-04 22:26:47 +00:00
fastcap
fasthenry	update to 3.0wr-021113	2013-03-28 01:06:02 +00:00
felt	- Update to version 3.07	2012-12-01 00:00:12 +00:00
flounder	- Fix build with clang	2012-12-23 19:11:12 +00:00
fvcom	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00
fvcom-mpi	Add new ports science/fvcom and science/fvcom-mpi:	2013-02-20 17:30:45 +00:00
fvm	Chase french/med upgrade.	2013-03-19 20:35:32 +00:00
g3data
gamess	update to 2012/5/1 R2 version.	2013-03-05 11:43:18 +00:00
gchemutils	science/openbabel:	2012-12-11 14:19:54 +00:00
gdis	- Update to 0.90	2013-03-02 06:29:42 +00:00
getdp	- forgot to remove a file in the last update.	2012-11-08 00:02:06 +00:00
ghemical	- Convert USE_GETTEXT to USES (part 1)	2013-04-24 07:35:40 +00:00
ghmm
gnudatalanguage	Finish converting the whole ports tree to USES=pkgconfig	2013-04-23 14:20:25 +00:00
gramps	Convert science to new options framework	2013-04-28 22:08:22 +00:00
gromacs	- Update to 4.6.2	2013-06-04 08:19:33 +00:00
gsmc
gsystem	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
gtamsanalyzer	- reset MAINTAINER	2012-06-26 05:44:19 +00:00
gwyddion	- Convert USE_GETTEXT to USES (part 4)	2013-04-26 10:44:28 +00:00
h5utils
harminv
hdf	- Update to 4.2.8.	2012-12-20 05:41:13 +00:00
hdf5
hdf5-18	Convert science to new options framework	2013-04-28 22:08:22 +00:00
hdf-java	Convert to new option framework	2012-12-13 10:47:44 +00:00
hs-bio	- Update The Glorious Glasgow Haskell Compiler to version 7.6.3	2013-06-04 18:53:40 +00:00
InsightToolkit	Readd specific EXAMPLES description because of specific comment in it	2013-04-29 05:39:52 +00:00
isaac-cfd	Style: tab -> space.	2013-03-28 16:28:59 +00:00
jmol	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
jstrack	- update to 3.3.4 (old version isn't fetchable anymore)	2012-11-08 11:40:29 +00:00
kalzium	KDE/FreeBSD team presents KDE SC 4.10.3 ports!	2013-05-18 20:34:41 +00:00
kmovisto	- Deprecate QT3, KDE3 and unmaintained ports depending on them. QT 3.3.8	2012-12-30 12:03:51 +00:00
kst	- Convert USE_GETTEXT to USES (part 3)	2013-04-24 18:10:30 +00:00
kst2	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
lamprop
libctl	- Does not build on 8.3-i386. Does build ok on 9.1-i386.	2013-04-15 17:29:36 +00:00
libghemical	- Convert USE_GETTEXT to USES (part 1)	2013-04-24 07:35:40 +00:00
libint
libkml	Fix typos and make small modifications in COMMENT (according to Porter's	2012-08-03 15:54:35 +00:00
liblinear	Convert science to new options framework	2013-04-28 22:08:22 +00:00
liboglappth	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
libquantum
libsvm	Convert science to new options framework	2013-04-28 22:08:22 +00:00
libsvm-python
linsmith	- Convert USE_ICONV=yes to USES=iconv	2013-04-27 18:25:24 +00:00
massxpert	The FreeBSD x11 team proudly presents	2013-05-25 14:37:02 +00:00
mayavi	- Update *_DEPENDS on x11-toolkits/py-tkinter after _tkinter.so relocation	2013-03-02 22:32:48 +00:00
mbdyn	Convert science to new options framework	2013-04-28 22:08:22 +00:00
mcstas	Fix with bmake(1)	2013-05-03 08:17:33 +00:00
medit	Fix build with clang.	2013-06-12 20:03:25 +00:00
meep	- Fix pkgconfig	2013-06-11 01:06:48 +00:00
mei	MEI stands for Mathematical Expression Interpreter.	2012-07-07 15:15:08 +00:00
minc	Update to version 1.5.1 [1]	2012-07-20 16:32:07 +00:00
minc2	Update to version 2.0.18 [1]	2012-07-20 16:33:32 +00:00
mol2ps	- Update to 0.3a	2013-05-29 05:30:58 +00:00
mpb
mpqc	Rectify USE_TEX to support both of teTeX and TeXLive.	2013-05-11 17:58:55 +00:00
mpqc-mpich
ncs	Rectify USE_TEX to support both of teTeX and TeXLive.	2013-05-11 17:58:55 +00:00
netcdf	Convert science to new options framework	2013-04-28 22:08:22 +00:00
netcdf3-ftn
netcdf4	Convert science to new options framework	2013-04-28 22:08:22 +00:00
netcdf-ftn
nifticlib	- Fix typos in COMMENT	2012-08-02 09:02:43 +00:00
omnetpp	Convert science to new options framework	2013-04-28 22:08:22 +00:00
openbabel	- convert USE_CMAKE to USES	2013-03-22 20:06:14 +00:00
ovt	Decommissioning java 1.5 (EOLed since October 2009):	2012-12-10 13:43:43 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Bond-Find	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Canonicalize	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-Mopac	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-PDB	- Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} or	2012-06-10 18:42:48 +00:00
p5-Chemistry-File-SLN	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-SMARTS	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-SMILES	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-VRML	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-File-XYZ	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-FormulaPattern	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-InternalCoords	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Isotope
p5-Chemistry-MacroMol	- Trim Makefile headers	2012-12-07 07:13:56 +00:00
p5-Chemistry-MidasPattern	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Mok	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Mol	- Trim Makefile headers	2012-12-06 02:12:52 +00:00
p5-Chemistry-Pattern	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Reaction	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Chemistry-Ring	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Geo-BUFR	- Update to 1.23	2013-05-15 00:29:31 +00:00
p5-Geo-Coordinates-Converter	Cleanup supporting perl version 5.8 and 5.10,	2012-12-17 06:15:27 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS	Update to 0.011.	2013-01-29 08:50:49 +00:00
p5-PerlMol	- Remove SITE_PERL from *_DEPENDS	2012-06-28 17:51:57 +00:00
p5-Physics-Unit
paje	- reset MAINTAINER	2012-06-26 05:44:19 +00:00
paraview	Convert science to new options framework	2013-04-28 22:08:22 +00:00
peekabot	This changes almost all the "gnomehack" only USE_GNOME cases to USES= pathfix.	2013-03-19 13:04:30 +00:00
pnetcdf	- Update to 1.3.1	2012-09-30 04:19:04 +00:00
psi3	- Fix all cases of 'No newline at end of file' in ports tree	2013-02-01 15:04:00 +00:00
psychopy	- Update to 1.77.00	2013-05-16 13:04:09 +00:00
py-DendroPy	Update to 3.12.0	2012-07-18 06:21:15 +00:00
py-h5py
py-hcluster
py-mdp	- Update to 3.2	2012-08-08 21:27:15 +00:00
py-mlpy
py-netCDF4	- Update to version 1.0.4	2013-04-30 00:39:35 +00:00
py-obspy	- Update to 0.8.3	2013-05-17 14:05:33 +00:00
py-paida	- Update *_DEPENDS on x11-toolkits/py-tkinter after _tkinter.so relocation	2013-03-02 22:32:48 +00:00
py-pydicom	Fix typos and make small modifications in COMMENT (according to Porter's	2012-08-03 15:54:35 +00:00
py-scikit-learn	Update to version 0.13.1.	2013-03-11 14:11:26 +00:00
py-scimath
py-scipy	- update to 0.11.0	2012-10-17 06:15:16 +00:00
py-ws2300	- Update to 1.7 [1]	2012-12-09 13:19:39 +00:00
pybrain
pycdf
pynn	- Update to 0.7.5	2013-03-02 05:49:40 +00:00
pyteomics	- Update to 2.1.5 and [1]:	2013-05-11 07:42:20 +00:00
pyteomics.biolccc	Allow to build with python3	2013-05-11 07:41:46 +00:00
qcl
qtresistors
R-cran-AMORE	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-bayesm	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-DCluster	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-e1071	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-eco	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-Epi	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-epicalc	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-snow	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
R-cran-som	Update math/R to 3.0.1-patched, and adjust dependent ports;	2013-05-28 15:15:05 +00:00
ruby-dcl	- Update to 1.7.0.	2012-07-25 01:23:45 +00:00
ruby-gphys	- Update to 1.2.2	2013-01-22 03:31:11 +00:00
ruby-netcdf
rubygem-ai4r	- Add patch to fix build	2013-02-26 02:34:03 +00:00
silo	Convert USE_NCURSES by USES=ncurses	2013-05-06 15:34:17 +00:00
simlib
step	KDE/FreeBSD team presents KDE SC 4.10.3 ports!	2013-05-18 20:34:41 +00:00
svmlight
szip
udunits
v_sim	WITHOUT_NLS -> PORT_OPTIONS:MNLS	2013-06-04 14:40:29 +00:00
veusz	Bump PORTREVISON after devel/py-sip and devel/qscintilla2 update.	2013-02-03 18:16:54 +00:00
vmd	Fix minor nit: use the canconical FreeBSD.org form for email addresses.	2013-03-17 16:44:03 +00:00
voro++	- add new port: science/voro++	2013-04-16 22:46:18 +00:00
x11iraf	Register CONFLICTS	2012-06-11 09:52:17 +00:00
xmakemol	Switch from libglut to freeglut and retire libglut. Libglut hasn't been	2012-08-04 22:52:02 +00:00
xmds	Convert science to new options framework	2013-04-28 22:08:22 +00:00
Makefile	- Rename science/py-obspy-core to science/py-obspy	2013-05-17 13:55:37 +00:00