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freebsd-ports/biology
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Wen Heping ac92b12813 Bio::GFF3 are low-level, fast functions for parsing GFF version 3 files. 
All they do is convert back and forth between low-level Perl data
structures and GFF3 text.

WWW: http://search.cpan.org/dist/Bio-GFF3/
2011-04-22 08:51:24 +00:00
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adun - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
ariadne - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
artemis - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
avida - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
babel - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
belvu - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
biococoa - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
biojava - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
blast - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
blat - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
boinc-simap - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
chemeq - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
clustalw
consed - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
crimap - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
crux - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
distribfold - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
dna-qc - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
dotter - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
embassy - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
emboss
fasta - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
fasta3
fastdnaml - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
finchtv - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
fluctuate - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
garlic - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
genpak - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
gff2ps - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
gmap
gperiodic - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
grappa Update to GNU make 3.82 after numerous -exp runs. 2011-04-11 19:54:35 +00:00
hmmer - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
iolib
jalview - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
kinemage - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
L-Breeder - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
lagan - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
lamarc - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
libgenome - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
libsbml - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
linux-foldingathome - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
lsysexp - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
mafft - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
mapm3 - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
migrate - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
molden - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
mopac - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
mrbayes - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
mummer - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
muscle - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
ncbi-toolkit - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
njplot - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
ortep3 - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-AcePerl - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-Bio-ASN1-EntrezGene - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-Bio-Das - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-Bio-Das-Lite
p5-Bio-GFF3 Bio::GFF3 are low-level, fast functions for parsing GFF version 3 files. 2011-04-22 08:51:24 +00:00
p5-Bio-Glite - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-Bio-Graphics
p5-Bio-MAGETAB - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo - Update to 0.36 2011-04-01 08:34:03 +00:00
p5-Bio-SCF - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-bioperl - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
p5-bioperl-run - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
paml - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
phd2fasta - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
phrap - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
phred - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
phylip - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
phyml - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
platon - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
povchem - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
primer3 - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
protomol - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
psi88 - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
py-biopython
pycogent
pyfasta - Update to 0.4.2 2011-04-13 09:11:20 +00:00
pymol - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
python-nexus
rasmol - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
recombine - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
ruby-bio
seaview - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
seqio - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
sim4 - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
ssaha - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
t_coffee - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
tinker
treepuzzle - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
treeviewx - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
tRNAscan-SE - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
velvet - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
wise - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
xdrawchem - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
xmolwt - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Makefile Bio::GFF3 are low-level, fast functions for parsing GFF version 3 files. 2011-04-22 08:51:24 +00:00