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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-29 05:38:00 +00:00
freebsd-ports/science
2024-03-18 10:21:38 +01:00
..
2d-rewriter *: Move manpages to share/man for imake ports. 2024-02-04 22:13:55 +03:00
abinit science/abinit: update 9.10.3 → 9.10.5 2024-02-22 01:38:39 -08:00
afni science/afni: update to 24.0.12 2024-03-17 19:45:20 +01:00
agrum science/agrum: update 1.10.0 → 1.12.1 2024-02-19 12:55:25 -08:00
aircraft-datcom
ALPSCore */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
antioch science/antioch: Fix build with llvm16 2023-07-21 19:20:04 +02:00
apbs
arbor science/{,py-}arbor: Update 0.8.1 → 0.9.0 2023-08-11 01:11:18 -07:00
ascent */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
atompaw */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
avogadro2 science/avogadro2: update 1.97.0 → 1.99.0 2024-02-12 15:07:36 -08:00
avogadrolibs science/{,py-}avogadrolibs: update 1.97.0 → 1.99.0 2024-02-12 15:07:35 -08:00
axom */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
bagel devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
bddsolve devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
berkeleygw science/berkeleygw: Broken on powerpc64le 2024-02-05 19:17:59 -08:00
bodr
bout++ */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
bout++-merging-filaments
buddy */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-01 23:11:47 +01:00
cantera */*: Sunset 12.4-RELEASE/12-STABLE from ports tree 2023-12-31 01:37:05 +01:00
cardioid */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
cdf
cdk */*: properly depend on Maven package 2024-03-11 10:09:45 +01:00
cdo science/cdo: Update to 2.3.0 2024-02-21 23:06:40 +08:00
cgnslib */*: Fix build with llvm16 on 13.2-STABLE 2023-07-26 02:48:20 +02:00
cgribex
checkmol
chemical-mime-data
chemicalfun devel/libfmt: Update to 10.1.1 2023-12-14 23:49:40 +08:00
chemps2 */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
chemtool
chemtool-devel *: Autotools manpages fix 2024-01-27 13:52:26 +03:00
chimes-calculator
ChipmunkPhysics
chrono */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
cif-tools science/cif-tools: update 1.0.9 → 1.0.11 2023-12-18 19:25:12 -08:00
clhep science/clhep: Update version 2.4.7.0=>2.4.7.1 2023-10-14 11:26:47 +02:00
clipper
code_saturne science/code_saturne: upgrade to 8.1.1 2024-02-23 17:23:28 +01:00
colt
conduit */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
coordgenlibs
cp2k */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
cp2k-data
csvtk all: Bump PORTREVISION after lang/go* update 2024-02-11 10:39:17 +00:00
dakota devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
dalton */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
dd_package
devisor
dftbplus */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
dftd3
dftd4 */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
dimod science/dimod: update 0.12.11 → 0.12.14 2024-01-18 10:08:15 -08:00
dirac science/dirac: Broken on powerpc64, powerpc64le; Fix build on i386 2024-02-02 10:44:26 -08:00
dkh science/dkh: drop not necessary CMAKE_ARGS 2023-08-12 03:37:42 +02:00
dlib-cpp */*: Bump jpeg-turbo users treewide 2023-07-28 19:13:17 +02:00
drawxtl science/drawxtl: Fix build with llvm16 2023-07-21 16:45:28 +02:00
dssp science/dssp: Remove comment 2023-07-24 01:48:48 -07:00
dvc
dwave-preprocessing science/dwave-preprocessing: update 0.6.3 → 0.6.5 2024-01-18 18:22:36 -08:00
dynare */*: bump PORTREVISION after the upgrade to SuiteSparse 2024-01-28 13:02:23 +01:00
eccodes science/eccodes: Update to 2.34.1 2024-03-09 22:05:26 +08:00
elk science/elk: update 9.2.12 → 9.4.2 2024-02-21 02:05:12 -08:00
elmerfem x11-toolkits/qwt6: Update to 6.2.0 and flavorize it 2024-02-22 09:14:00 +01:00
epte MANPREFIX: eleminate its usage and move man to share/man 2024-01-09 11:32:17 +01:00
erd science/erd: drop not necessary anymore CMAKE_ARGS 2023-08-12 03:37:41 +02:00
ergo */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
erkale */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
erkale-pseudopotentials
fastcap science/fastcap: use malloc instead of sbrk 2023-12-08 23:29:38 +00:00
fasthenry science/fasthenry: use malloc instead of sbrk 2023-12-08 23:29:39 +00:00
fastjet science/fastjet: Update 3.4.1 → 3.4.2 2023-07-28 23:35:56 -07:00
feff10
fleur */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
frontistr */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
fsom
fvcom
fvcom-mpi
gabedit */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
gamess-us
gbtolib science/gbtolib: Broken on powerpc64 and powerpc64le 2024-01-11 21:41:39 -08:00
gchemutils science/gchemutils: Moved man to share/man 2024-02-25 13:54:37 +01:00
gcp science/gcp: New port: Geometrical Counter-Poise Correction 2023-08-05 11:49:53 -07:00
gdma
geant4 science/geant4: Update to 11.2.0 2023-12-13 08:55:39 +01:00
gemmi science/{,py-}gemmi: update 0.6.4 → 0.6.5 2024-02-18 02:07:54 -08:00
getdp science/getdp: Updat to 3.6.0. 2024-03-11 14:32:08 -05:00
ghemical */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
ghmm */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
gnudatalanguage devel/shapelib: Update to 1.6.0 2023-12-26 00:10:50 +08:00
gpaw-setups
gramps science/gramps: Update to 5.2.0 2024-02-24 10:42:25 +00:00
grib_api
gromacs */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
gsmc science/gsmc: Moved man to share/man 2024-02-25 13:54:38 +01:00
gtamsanalyzer */*: Fix build with llvm16 on 13.2-STABLE 2023-07-26 02:48:20 +02:00
h5utils *: Autotools manpages fix 2024-01-27 13:52:26 +03:00
h5z-zfp science/h5z-zfp: update 1.1.0 → 1.1.1 2023-09-01 01:26:25 -07:00
harminv science/harminv: Moved man to share/man 2024-02-25 13:54:40 +01:00
hdf MAN[1-5]PREFIX: eleminate its usage and move man to share/man 2024-01-09 16:41:04 +01:00
hdf5
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive science/highfive: update 2.8.0 → 2.9.0 2024-03-11 12:16:48 -07:00
hypre science/hypre: update 2.30.0 → 2.31.0 2024-02-15 03:35:04 -08:00
iboview */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
InsightToolkit science/InsightToolkit: Eliminate conflict with lp_solve by renaming the shared library 2024-01-02 22:30:13 -08:00
InsightToolkit501 */*: Bump jpeg-turbo users treewide 2023-07-28 19:13:17 +02:00
isaac-cfd */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-01 23:11:47 +01:00
jdftx */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
jmol science/jmol: Update 16.1.13 → 16.1.25 2023-07-19 22:42:40 -07:00
jstrack science/jstrack: Declutter public_distfiles 2023-07-23 12:50:16 +02:00
kalzium KDE: Update KDE Gear to 23.08.5 2024-02-16 20:31:32 +01:00
kim-api
kplib bsd.sites.mk: Update all ports using USE_GITLAB 2023-07-12 20:56:04 +02:00
kst2 science/kst2: fix build with C++17 2023-07-17 13:07:35 +03:00
lammps */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
lamprop
latte */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
libaec science/libaec: Add make test 2023-12-25 17:03:13 +08:00
libccp4
libcifpp science/libcifpp: Fix fetch broken by update of unversioned file 2023-07-21 00:34:45 -07:00
libcint science/libcint: update 6.1.0 → 6.1.2 2024-03-14 10:44:06 -07:00
libctl science/libctl: Moved man to share/man 2024-01-29 23:25:58 +01:00
libecpint
libefp
libgetar science/{,py-}libgetar: update 1.1.3 → 1.1.5 2023-12-06 23:17:34 -08:00
libghemical */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
libgridxc */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
libint
libint2 science/libint2: update 2.8.2 → 2.9.0 2024-03-06 11:50:16 -08:00
libint2-psi4 science/libint2-psi4: Broken on i386 and armv7 2024-01-11 19:09:48 -08:00
libkml science/libkml: Fix linking with CMake >= 3.27 2023-11-08 00:36:35 -05:00
liblinear science/liblinear: Update to 2.47 2023-08-01 00:39:51 +08:00
libmbd */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
libmsym
libnegf */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc bsd.sites.mk: Update all ports using USE_GITLAB 2023-07-12 20:56:04 +02:00
libxc science/libxc: Add NATIVE option 2023-07-13 18:24:29 -07:00
liggghts */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
linux-zotero
luscus
m-aneos
madness */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
maeparser devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
massxpert */*: Drop maintainership for some of my ports 2024-01-27 09:23:07 +00:00
mbdyn */*: bump PORTREVISION after the upgrade to SuiteSparse 2024-01-28 13:02:23 +01:00
mcpl science/mcpl: New port: Monte Carlo Particle Lists library 2023-11-08 21:43:56 -08:00
mcstas
mcstas-comps
mctc-lib
mcxtrace science/mcxtrace: Moved man to share/man 2024-02-25 13:54:42 +01:00
mcxtrace-comps
mdynamix science/mdynamix: update 5.2.8 → 5.3.0 2023-12-14 12:34:17 -08:00
medit
meep science/meep: update 1.27.0 → 1.28.0 2024-01-02 00:34:27 -08:00
mercantile all: return bland@'s ports to the pool (+gnome) after safekeeping their commit bit. 2023-10-02 21:19:30 +02:00
metaphysicl
minc2 science/minc2: Moved man to share/man 2024-02-25 13:54:43 +01:00
mmdb2
mmtf-cpp
mol2ps */*: Bump PORTREVISION because lang/fpc installs missing serial unit 2023-12-22 20:11:51 -05:00
molgif all: Bump PORTREVISION after lang/go* update 2024-02-11 10:39:17 +00:00
molscript */*: Bump jpeg-turbo users treewide 2023-07-28 19:13:17 +02:00
molsketch
mopac science/mopac: update 22.1.0 → 22.1.1 2024-01-30 00:56:27 -08:00
mp2d
mpb */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
mpqc */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
mrchem science/mrchem: update 1.1.3 → 1.1.4 2024-01-17 21:54:06 -08:00
mrcpp */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
msms MAN?PREFIX: eleminate its usage and move man to share/man 2024-01-10 16:29:49 +01:00
mstore
multicharge */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
multiwfn */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
mutationpp science/mutationpp: New port: MUlticomponent Thermodynamic And Transport library for IONized gases 2023-11-05 22:33:14 -08:00
namd
ncrystal science/{,py-}ncrystal: update 3.7.1 → 3.8.0 2023-12-04 02:12:28 -08:00
nest science/nest: bump PORTREVISION 2023-08-12 03:37:41 +02:00
netcdf science/netcdf: Sort PLIST after 5a058bc79d 2024-02-21 23:06:40 +08:00
netcdf-cxx
netcdf-fortran science/netcdf-fortran: Update manpage location (003a571d1d, r523104) 2024-02-21 23:06:41 +08:00
nifticlib science/nifticlib: Sanitize MANPREFIX 2024-01-22 02:32:48 +01:00
nlcglib */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
nwchem */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
nwchem-data
ocean */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
octopus */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
openbabel science/openbabel: Add perl build dependency 2023-11-04 09:57:02 -07:00
openems devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
openkim-models
openmc devel/libfmt: Update to 10.1.1 2023-12-14 23:49:40 +08:00
openmodelica science/openmodelica: update 1.22.0 → 1.22.2 2024-02-22 01:38:41 -08:00
openmolcas science/openmolcas: Update 22.06 → 23.06 2023-07-23 01:50:35 -07:00
openmx */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
opensim-core */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
opensph science/opensph: update 0.4.0 → 0.4.1 2023-12-18 10:02:39 -08:00
opsin */*: properly depend on Maven package 2024-03-11 10:09:45 +01:00
optench science/optench: new port, a virtual optical bench 2024-02-16 17:37:24 +01:00
orthanc devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-dicomweb devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-mysql devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-postgresql devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-webviewer devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
p5-Algorithm-SVMLight science/p5-Algorithm-SVMLight: Mark DEPRECATED 2024-03-14 12:30:00 +01:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements science/p5-Chemistry-Elements: update to 1.077 2024-02-11 20:03:13 +01:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools science/p5-Mcstas-Tools: Add NO_ARCH 2023-08-01 00:42:09 +08:00
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 devel/onetbb: Update to 2021.11.0 2023-11-28 12:35:02 +01:00
paje */*: Fix build with llvm16 on 13.2-STABLE 2023-07-26 02:48:20 +02:00
paraview science/paraview: upgrade to 5.12.0 2024-03-16 11:06:10 +01:00
pastix science/pastix: upgrade to v6.3.2 2023-12-14 19:34:00 +01:00
pcmsolver
PETSc science/PETSc: update 3.20.4 → 3.20.5 2024-03-11 09:20:36 -07:00
phonopy science/{,py-}phonopy: update 2.21.1 → 2.21.2 2024-02-18 20:52:20 -08:00
plumed */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
pnetcdf science/pnetcdf: Update WWW and clean up pkg-descr 2024-03-09 22:05:27 +08:00
polytope
precice devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
psi4 science/psi4: Convert to USE_PYTHON=pytest 2024-03-09 23:21:39 +08:00
pulseview MANPREFIX: eleminate its usage and move man to share/man 2024-01-09 11:32:17 +01:00
py-abipy science/py-abipy: update 0.9.4 → 0.9.6 2023-08-30 00:38:50 -07:00
py-access
py-arbor science/{,py-}arbor: Update 0.8.1 → 0.9.0 2023-08-11 01:11:18 -07:00
py-arch devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-asap3 */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
py-asdf devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-asdf-standard devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-asdf-transform-schemas devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-asdf-unit-schemas devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-ase *: Fix build after 3232af1895 (www/py-flask PORTNAME change) 2023-12-01 14:39:02 +08:00
py-atomium
py-avogadrolibs science/{,py-}avogadrolibs: update 1.97.0 → 1.99.0 2024-02-12 15:07:35 -08:00
py-boutdata devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-boututils devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-cdo
py-cfgrib
py-chainer devel/protobuf: Update to 24.4 2023-12-15 01:03:10 +08:00
py-chainer-chemistry
py-chempy science/py-chempy: Update 0.8.2 → 0.8.3 2023-07-16 23:20:36 -07:00
py-cirq-aqt science/py-cirq-aqt: update 1.2.0 → 1.3.0 2023-12-03 16:37:08 -08:00
py-cirq-core science/py-cirq-core: update 1.2.0 → 1.3.0 2023-12-03 16:37:09 -08:00
py-cirq-google science/py-cirq-google: update 1.2.0 → 1.3.0 2023-12-03 16:37:10 -08:00
py-cirq-ionq science/py-cirq-ionq: update 1.2.0 → 1.3.0 2023-12-03 16:37:09 -08:00
py-cirq-pasqal science/py-cirq-pasqal: update 1.2.0 → 1.3.0 2023-12-03 16:37:08 -08:00
py-cirq-rigetti science/py-cirq-rigetti: update 1.2.0 → 1.3.0 2023-12-03 16:37:10 -08:00
py-coards
py-DendroPy
py-dftbplus science/{,py-}dftbplus: Update 22.2 → 23.1 2023-07-11 20:21:05 -07:00
py-dftd4 science/py-dftd4: Broken 2023-08-15 00:53:10 -07:00
py-dimod science/py-dimod: update 0.12.11 → 0.12.14 2024-01-18 10:08:15 -08:00
py-dipy science/py-dipy: update 1.7.0 → 1.8.0 2023-12-17 11:01:49 -08:00
py-dlib science/py-dlib: Update to 19.24.2 2023-12-19 19:33:52 +03:00
py-dwave-cloud-client science/py-dwave-cloud-client: update 0.11.2 → 0.11.3 2024-03-04 15:19:09 -08:00
py-dwave-greedy
py-dwave-hybrid science/py-dwave-hybrid: update 0.6.10 → 0.6.11 2024-03-04 15:19:09 -08:00
py-dwave-inspector science/py-dwave-inspector: update 0.4.2 → 0.4.4 2024-01-18 19:29:19 -08:00
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk science/py-dwave-ocean-sdk: update 6.8.0 → 6.9.0 2024-03-04 15:19:10 -08:00
py-dwave-preprocessing science/py-dwave-preprocessing: update 0.6.3 → 0.6.5 2024-01-18 18:22:37 -08:00
py-dwave-samplers science/py-dwave-samplers: update 1.1.0 → 1.2.0 2024-01-18 18:22:38 -08:00
py-dwave-system science/py-dwave-system: update 1.20.0 → 1.23.0 2024-01-18 18:22:38 -08:00
py-dwave-tabu
py-dwavebinarycsp science/py-dwavebinarycsp: update 0.2.0 → 0.3.0 2024-01-18 10:08:16 -08:00
py-earthpy
py-eccodes science/py-eccodes: Update to 1.7.0 2024-03-09 22:06:14 +08:00
py-emmet-core science/py-emmet-core: Add NO_ARCH 2024-03-10 03:10:04 +08:00
py-esda devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-fresnel devel/onetbb: Update to 2021.11.0 2023-11-28 12:35:02 +01:00
py-gemmi science/{,py-}gemmi: update 0.6.4 → 0.6.5 2024-02-18 02:07:54 -08:00
py-geolinks science/py-geolinks: Update to 0.2.3 2023-09-11 11:11:31 +08:00
py-geomet science/py-geomet: Update to 1.1.0 2023-11-27 18:28:22 +08:00
py-geometer
py-geometric
py-gpaw */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
py-GPy
py-GPyOpt
py-gsd science/py-gsd: Update 3.1.0 → 3.1.1 2023-08-04 02:07:12 -07:00
py-h5json
py-h5py science/py-h5py: Update to 3.10.0 2023-10-11 20:58:13 +08:00
py-HepMC3
py-hiphive science/py-hiphive: Update 1.1 → 1.2 2023-08-14 09:48:49 -07:00
py-hoomd-blue science/py-hoomd-blue: update 4.4.0 → 4.4.1 2023-12-22 00:05:38 -08:00
py-inequality devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-ipygany science/py-ipygany: Fix build with python-3.11 2024-01-22 12:22:15 +00:00
py-jupyter_jsmol science/py-jupyter_jsmol: Convert to USE_PYTHON=pytest 2024-03-09 23:21:42 +08:00
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-liac-arff
py-libgetar science/{,py-}libgetar: update 1.1.3 → 1.1.5 2023-12-06 23:17:34 -08:00
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
py-meshio science/py-meshio: Convert to USE_PYTHON=pytest 2024-03-09 23:21:44 +08:00
py-mmcif science/py-mmcif: update 0.83 → 0.84 2024-01-03 01:10:29 -08:00
py-mmtf-python
py-molmod
py-moltemplate science/py-moltemplate: update 2.20.20 → 2.20.21 2024-02-11 23:56:24 -08:00
py-mp-api science/py-mp-api: Add NO_ARCH 2024-03-10 03:10:05 +08:00
py-mpcontribs-client devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-mrchem science/py-mrchem: update 1.1.3 → 1.1.4 2024-01-17 21:54:17 -08:00
py-ncrystal science/{,py-}ncrystal: update 3.7.1 → 3.8.0 2023-12-04 02:12:28 -08:00
py-netCDF4 science/py-netCDF4: Update version 1.6.4=>1.6.5 2023-10-26 14:22:06 +02:00
py-netcdf-flattener
py-nglview science/py-nglview: update 3.0.6 → 3.0.7 2023-09-01 23:41:09 -07:00
py-nibabel science/py-nibabel: Fix the failing test 2023-12-12 13:14:13 -08:00
py-nilearn science/py-nilearn: update 0.10.1 → 0.10.3 2024-01-30 00:56:28 -08:00
py-obspy
py-oddt
py-openbabel science/py-openbabel: Fix build with llvm16 2023-08-07 17:24:44 +02:00
py-OpenFermion science/py-OpenFermion: update 1.5.1 → 1.6.0 2023-10-29 21:19:20 -07:00
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking
py-paida */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-01 23:11:47 +01:00
py-paramz
py-penaltymodel science/py-penaltymodel: update 1.0.2 → 1.1.0 2024-01-18 10:08:16 -08:00
py-phono3py */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
py-phonopy science/{,py-}phonopy: update 2.21.1 → 2.21.2 2024-02-18 20:52:20 -08:00
py-PubChemPy
py-pupynere
py-py3Dmol science/py-py3Dmol: update 2.0.3 → 2.1.0 2024-03-12 23:17:02 -07:00
py-pyaixi
py-pyberny
py-pycsw
py-pydicom science/py-pydicom: Update to 2.4.4 2023-12-28 12:13:06 +00:00
py-PyFR
py-pygeodesy
py-pygeometa science/py-pygeometa: Update to 0.15.3 2023-09-22 11:19:09 +08:00
py-pygmo2 science/py-pygmo2: update 2.19.5 → 2.19.6 2024-02-22 01:38:41 -08:00
py-pyked
py-pymatgen science/py-pymatgen: Convert to USE_PYTHON=pytest 2024-03-09 23:21:48 +08:00
py-pymatgen-analysis-alloys devel/py-setuptools: convert individual consumers to ${PY_SETUPTOOLS} 2023-07-17 20:53:09 -04:00
py-pymbd
py-pymol Revert "science/py-pymol: Mark DEPRECATED" 2023-10-29 16:37:06 -04:00
py-PyNE science/py-PyNE: update 0.7.7 → 0.7.8 2024-01-21 19:14:47 -08:00
py-pyosf
py-pyprecice science/py-pyprecice: Update 2.5.0.2 → 2.5.0.4 2023-08-10 00:08:02 -07:00
py-pyqubo
py-pysal
py-pyscf science/py-pyscf: update 2.4.0 → 2.5.0 2024-02-06 09:33:31 -08:00
py-pyteomics science/py-pyteomics: Convert to USE_PYTHON=pep517 2024-03-09 22:06:14 +08:00
py-qcelemental science/py-qcelemental: update 0.27.0 → 0.27.1 2024-01-01 22:11:34 -08:00
py-qcengine science/py-qcengine: Fix build 2024-01-21 22:54:31 -08:00
py-qiskit science/py-qiskit: Update 0.43.3 → 0.44.0 2023-07-28 00:45:18 -07:00
py-qiskit-aer science/py-qiskit-aer: Update 0.12.1 → 0.12.2 2023-07-12 23:28:14 -07:00
py-qiskit-dynamics
py-qiskit-experiments science/py-qiskit-experiments: Update 0.5.2 → 0.5.3 2023-07-07 23:40:25 -07:00
py-qiskit-finance
py-qiskit-ibm-experiment
py-qiskit-ibm-provider science/py-qiskit-ibm-provider: Update 0.6.1 → 0.6.2 2023-07-25 23:20:27 -07:00
py-qiskit-ibmq-provider
py-qiskit-nature
py-qiskit-optimization
py-qiskit-terra lang/rust: Bump revisions after 1.76.0 2024-02-19 12:59:23 +01:00
py-qspin
py-quantities science/py-quantities: update 0.14.1 → 0.15.0 2023-12-12 17:26:29 -08:00
py-rmf science/{,py-}rmf: update 1.5.1 → 1.6.0 2023-12-15 14:23:55 -08:00
py-rmsd
py-ruffus science/py-ruffus: Update to 2.8.4 2023-12-20 11:52:13 +01:00
py-scikit-fuzzy
py-scikit-learn science/py-scikit-learn: Update to 1.4.0 2024-01-19 00:25:37 +00:00
py-scikit-optimize
py-scikit-sparse */*: bump PORTREVISION after the upgrade to SuiteSparse 2024-01-28 13:02:23 +01:00
py-scimath
py-scipy */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
py-scoria
py-sdf
py-segregation devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-segyio science/py-segyio: Convert to USE_PYTHON=pytest 2024-03-09 23:21:50 +08:00
py-signac science/py-signac: update 2.1.0 → 2.2.0 2024-02-16 10:08:31 -08:00
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-spglib devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-tensorflow science/py-tensorflow: Mark BROKEN 2024-02-17 07:05:56 +01:00
py-thewalrus science/py-thewalrus: update 0.20.0 → 0.21.0 2024-01-11 00:31:26 -08:00
py-tobler
py-trainstation
py-trx-python devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-tweedledum science/py-tweedledum: Force GCC 12 when GCC is needed 2024-02-21 20:42:35 +00:00
py-vedo science/py-vedo: update 2023.4.6 → 2023.5.0 2024-01-01 22:53:21 -08:00
py-veusz
py-xbout devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
pybrain
pynn science/pynn: Update to 0.12.2 2024-02-23 12:05:11 +00:00
q
qbox science/qbox: update 1_76_2 → 1_76_3 2024-03-04 15:19:08 -08:00
qcl
qiskit-aer devel/libfmt: Update to 10.1.1 2023-12-14 23:49:40 +08:00
qmcpack */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
qt6-quick3dphysics Qt6: Update to 6.6.2 2024-02-16 16:09:44 -05:00
quantum-espresso science/quantum-espresso: update 6.7.0 → 7.3.1 2024-03-16 01:05:35 -07:00
quantum-espresso-pseudopotentials science/quantum-espresso-pseudopotentials: update g20180406 → g20220916 2024-03-16 01:05:36 -07:00
quantum-jet */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
qwalk
R-cran-bayesm science/R-cran-bayesm: Update to 3.1.6 2023-09-28 09:21:18 +00:00
R-cran-cmprsk
R-cran-DCluster science/R-cran-DCluster: Update to 0.2-10 2024-02-07 13:03:02 +00:00
R-cran-e1071 science/R-cran-e1071: Update to 1.7-14 2023-12-09 17:31:19 +00:00
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks science/R-cran-ks: upgrade to 1.14.2 2024-01-16 21:47:12 +01:00
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit science/rdkit: Clang-17 crashes on FreeBSD 15 amd64 2024-03-17 01:21:51 -07:00
rmf devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo science/rubygem-rgeo: Update to 3.0.1 2023-11-27 18:30:02 +08:00
rubygem-rgeo-geojson
rubygem-rgeo-proj4 graphics/proj: Update to 9.2.1 2023-07-26 21:58:55 +02:00
rubygem-rgeo-shapefile science/rubygem-rgeo-shapefile: Update to 3.1.0 2023-10-05 10:00:33 +08:00
rubygem-ruby-netcdf
salome-configuration */*: Replace format=bsdtar with format=ustar in tar archive operations 2024-02-18 17:48:08 -08:00
salome-kernel */*: Replace format=bsdtar with format=ustar in tar archive operations 2024-02-18 17:48:08 -08:00
scidavis */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
sciplot
segyio
serac */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
shelxle science/shelxle: update 1.0.1615 → 1.0.1623 2024-03-15 08:46:27 -07:00
siconos */*: bump PORTREVISION after the upgrade to SuiteSparse 2024-01-28 13:02:23 +01:00
siesta */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
sigrok-cli science/sigrok-cli: Moved man to share/man 2024-02-22 14:23:39 +01:00
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils MAN?PREFIX: eleminate its usage and move man to share/man 2024-01-10 16:29:49 +01:00
silo
simbody */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
simgrid devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
simint
simlib */*: Sunset 12.4-RELEASE/12-STABLE from ports tree 2023-12-31 01:37:05 +01:00
simple-dftd3 */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
simsmith
sirius science/sirius: Broken on 15 due to clang crash 2024-01-12 02:15:57 -08:00
smoldyn science/smoldyn: update 2.72 → 2.73 2024-03-11 09:20:40 -07:00
sparta */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
spglib science/{,py-}spglib: update 2.3.0 → 2.3.1 2024-02-11 11:02:55 -08:00
spheral science/spheral: update 2023.06.0 → 2024.01.0 2024-01-21 10:21:59 -08:00
step KDE: Update KDE Gear to 23.08.5 2024-02-16 20:31:32 +01:00
svmlight science/svmlight: Mark DEPRECATED 2024-03-14 12:29:59 +01:00
tblite */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
teem */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
tfel science/tfel: Fix build with llvm16 2023-08-02 23:18:14 +02:00
tfel-edf */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
thermofun devel/py-setuptools: convert individual consumers to ${PY_SETUPTOOLS} 2023-07-17 20:53:09 -04:00
tinker science/tinker: Fix build on non-Intel architectures 2023-07-19 11:26:05 -07:00
trilinos science/trilinos: update 13-4-1 → 15-1-0 2024-03-06 02:32:59 -08:00
ttk science/ttk: chase ParaView’s upgrade 2024-03-16 11:06:10 +01:00
tweedledum
udunits
ukrmol+ */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
v_sim science/v_sim: move man pages 2024-02-23 17:23:08 +01:00
vipster science/vipster: update 1.19.1b-14 → 1.19.1b-109 2023-12-29 19:44:45 -08:00
vmd
voro++
votca devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
wannier90 */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem bsd.sites.mk: Update all ports using USE_GITLAB 2023-07-12 20:56:04 +02:00
xtb */*: bump PORTREVISION after the upgrade of OpenBLAS 2023-12-12 20:03:50 +01:00
yoda science/yoda: Update 1.9.6 → 1.9.8 2023-07-24 01:48:48 -07:00
zotero science/zotero: Update to 6.0.36 2024-03-18 10:21:38 +01:00
zx
Makefile science/optench: new port, a virtual optical bench 2024-02-16 17:37:24 +01:00