David Naylor e288e58754 Convert Mk/bsd.cran.mk to the Uses framework. ... PR: ports/184699 Reviewed by: bapt Approved by: portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)		2013-12-28 10:28:40 +00:00
..
2d-rewriter	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
2dhf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
abinit	science/abinit: depends explicitly on "python"	2013-12-15 12:49:28 +00:00
afni	Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;	2013-11-13 08:19:34 +00:00
avogadro	- Update from 1.1.0 to 1.1.1	2013-12-18 23:33:20 +00:00
bddsolve	Convert LIB_DEPENDS for ports depending on boost	2013-12-12 14:15:03 +00:00
bft	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
bodr	- Update to version 10	2013-11-02 17:34:59 +00:00
brian	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
buddy	Reset maintainer for llwang@infor.org	2013-12-18 10:38:33 +00:00
cdcl	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
cdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
cdo	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
cgnslib	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
checkmol	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
chemical-mime-data	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
chemtool	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
chemtool-devel	science/chemtool-devel: Unbreak on FreeBSD 10+	2013-12-25 22:08:13 +00:00
clhep	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
colt	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
crf++	- Remove NO_STAGE as these have been tested to be safe	2013-09-25 00:54:08 +00:00
dcl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
devisor	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
dlpoly-classic	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
dtiquery	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
ecs	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-eio	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-hutiter	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
elmer-matc	science/elmer(post,-matc): Use modern fortran, unbreak, undeprecate	2013-12-26 02:47:52 +00:00
elmer-meshgen2d	- Remove NO_STAGE as these have been tested to be safe	2013-09-25 00:54:08 +00:00
elmergrid	- Remove NO_STAGE as these have been tested to be safe	2013-09-25 00:54:08 +00:00
elmerpost	science/elmer(post,-matc): Use modern fortran, unbreak, undeprecate	2013-12-26 02:47:52 +00:00
epte	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
euler	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
fastcap	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
fasthenry	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
felt	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
fisicalab	Added FisicaLab port.	2013-10-08 19:31:32 +00:00
flounder	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
fvcom	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
fvcom-mpi	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
fvm	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
g3data	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
gamess	uncomment MANUAL_PACKAGE_BUILD.	2013-11-29 01:45:50 +00:00
gchemutils	Add patch to unbreak with libc++ 10.0+.	2013-12-03 22:10:25 +00:00
gdis	Explicitly link libraries on 10 unmaintained ports	2013-10-07 23:40:23 +00:00
getdp	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ghemical	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ghmm	- Remove NO_STAGE as these have been tested to be safe	2013-09-25 00:54:08 +00:00
gnudatalanguage	- Upgrade to 1.3.18.	2013-11-30 15:08:05 +00:00
gramps	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
gromacs	- USES=fortran.	2013-12-27 16:39:52 +00:00
gsmc	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
gtamsanalyzer	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
gwyddion	- Bump dependent ports' revisions (graphics/ilmbase and graphics/OpenEXR)	2013-11-20 14:25:28 +00:00
h5utils	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
harminv	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
hdf	New LIB_DEPENDS syntax, USES=fortran, staging.	2013-12-27 16:55:28 +00:00
hdf5	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
hdf5-18	- Fix PKGNAME collision	2013-12-11 18:38:53 +00:00
hdf-java	- Convert to dos2unix.mk	2013-11-19 23:08:44 +00:00
hs-bio	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
InsightToolkit	Now when it builds on 10.x, drop maintainership	2013-12-21 00:28:51 +00:00
isaac-cfd	- USES=fortran gmake.	2013-12-27 20:26:21 +00:00
jmol	- Update to version 13.2.3 [1]	2013-11-07 16:53:33 +00:00
jstrack	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
kalzium	- Update from 1.1.0 to 1.1.1	2013-12-18 23:33:20 +00:00
kst2	Add patches to fix build on 10 and head	2013-12-09 15:08:42 +00:00
lamprop	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
libctl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
libghemical	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
libint	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
libkml	- Update LICENSE	2013-12-26 21:48:54 +00:00
liblinear	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
liboglappth	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
libquantum	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
libsvm	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
libsvm-python	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
linsmith	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
massxpert	- Remove manual creation and removal of share/applications, as it's now in the mtree (categories starting with [st])	2013-10-22 14:01:38 +00:00
mbdyn	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mcstas	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
medit	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
meep	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mei	- Upgrade to 1.0.4;	2013-11-26 21:30:22 +00:00
minc	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
minc2	Mark as broken: does not build with newer hdf5 version:	2013-12-06 11:44:48 +00:00
mol2ps	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
mpb	- New LIB_DEPENDS syntax.	2013-12-27 21:28:47 +00:00
mpqc	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
mpqc-mpich	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
ncs	science/ncs: fix 'python' usage to remove implicity dependency of lang/python	2013-12-17 21:55:48 +00:00
netcdf	- Fix PKGNAME collision	2013-11-06 17:34:52 +00:00
netcdf3-ftn	- Fix PKGNAME collision	2013-11-06 17:35:50 +00:00
netcdf4	- Use CONFLICTS_INSTALL instead of CONFLICTS	2013-12-10 19:17:08 +00:00
netcdf-ftn	- Remove LATEST_LINK	2013-12-10 19:18:39 +00:00
nifticlib	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
openbabel	Add upstream patch to fix the build with libc++.	2013-11-13 15:49:25 +00:00
p5-Algorithm-SVMLight	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-3DBuilder	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Bond-Find	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Canonicalize	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Elements	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-File-MDLMol	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-Mopac	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-PDB	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-SLN	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-SMARTS	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-SMILES	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-VRML	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-File-XYZ	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-FormulaPattern	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-InternalCoords	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Isotope	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-MacroMol	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-MidasPattern	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Mok	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Mol	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Chemistry-Pattern	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Reaction	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Chemistry-Ring	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Geo-BUFR	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-Geo-Coordinates-Converter-iArea	- Support STAGEDIR	2013-09-30 20:59:03 +00:00
p5-Geo-ReadGRIB	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Geo-WebService-Elevation-USGS	Support STAGEDIR.	2013-11-06 01:32:11 +00:00
p5-PerlMol	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
p5-Physics-Unit	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
paje	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
paraview	Update freetype to 2.5.2.	2013-12-24 21:22:21 +00:00
peekabot	Convert LIB_DEPENDS for ports depending on boost	2013-12-12 14:15:03 +00:00
pnetcdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
psi3	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
psychopy	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-coards	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
py-DendroPy	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
py-h5py	science/py-h5py: update to 2.2.1	2013-12-13 19:59:42 +00:00
py-hcluster	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-mdp	Reset maintainer for llwang@infor.org	2013-12-18 10:38:33 +00:00
py-mlpy	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-netCDF4	- Convert to dos2unix.mk	2013-11-19 23:08:44 +00:00
py-obspy	- Fix build with distribute -> setuptools change	2013-11-27 19:21:00 +00:00
py-paida	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
py-pupynere	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
py-pyaixi	science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm	2013-12-08 14:12:47 +00:00
py-pydap	science/py-pydap: update to 3.1.1	2013-11-29 11:40:24 +00:00
py-pydicom	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
py-scikit-learn	Use PYDISTUTILS_AUTOPLIST.	2013-11-05 12:37:28 +00:00
py-scimath	- Update WWW:	2013-11-20 20:51:25 +00:00
py-scipy	- Fix distinfo	2013-11-18 15:36:42 +00:00
py-ws2300	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
pybrain	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pycdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pynn	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
pyteomics	Update to 2.2.1	2013-11-29 11:57:18 +00:00
pyteomics.biolccc	- Update WWW:	2013-11-20 20:51:25 +00:00
qcl	- Update to version 0.6.3	2013-10-30 17:57:33 +00:00
qtresistors	- Convert to USES=qmake (and other USES while I'm here)	2013-11-22 12:55:00 +00:00
R-cran-AMORE	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-bayesm	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-DCluster	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-e1071	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-eco	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-Epi	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-epicalc	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-snow	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
R-cran-som	Convert Mk/bsd.cran.mk to the Uses framework.	2013-12-28 10:28:40 +00:00
ruby-dcl	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ruby-gphys	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
ruby-netcdf	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
rubygem-ai4r	- Add stage support	2013-10-30 02:56:33 +00:00
silo	- Update from 4.9 to 4.9.1	2013-12-18 23:27:40 +00:00
simlib	- Update to 3.02	2013-09-21 11:02:36 +00:00
step	Add my upstream commit that fixes the build with libc++.	2013-11-03 22:48:12 +00:00
svmlight	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
szip	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
udunits	- Strip shared library	2013-10-10 14:32:08 +00:00
v_sim	Update to libmpc version 1.0.1 which brings the following fixes:	2013-10-26 00:52:33 +00:00
veusz	- Update to 1.19.1	2013-12-22 14:33:44 +00:00
vmd	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
voro++	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
x11iraf	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
xfce4-equake-plugin	- Update MASTER_SITES macro, xfce4-equake-plugin is now hosted on	2013-10-31 17:11:01 +00:00
xmakemol	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
xmds	Add NO_STAGE all over the place in preparation for the staging support (cat: science)	2013-09-20 22:48:30 +00:00
Makefile	science/py-pyaixi: Implementation of the MC-AIXI-CTW AI algorithm	2013-12-08 14:12:47 +00:00