Yuri Victorovich f82e1a2fc9 */*: Cosmetic changes		2024-09-10 21:09:33 -07:00
..
2d-rewriter
abinit	textproc/xmlf90: change to cmake; use static release tarball; update WWW	2024-09-01 18:31:17 -07:00
afni	science/afni: update to 24.2.05	2024-09-08 14:00:32 +02:00
agrum	science/agrum: update 1.14.1 → 1.15.0	2024-07-23 02:28:16 -07:00
aircraft-datcom
ALPSCore
antioch
apbs
arbor	science/arbor: Replace the units bundled lib with external dependency	2024-08-25 17:52:24 -07:00
ascent	science/ascent: update 0.9.2 → 0.9.3	2024-09-09 12:09:43 -07:00
atompaw
avogadro2
avogadrolibs
axom
bagel
bddsolve
berkeleygw
bodr
bout++
bout++-merging-filaments
buddy
cantera
cardioid	science/cardioid: fix build without libomp	2024-07-29 17:10:13 +02:00
cdf
cdk
cdo	science/cdo: Update to 2.4.3p1	2024-09-09 02:37:02 +08:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun
chemps2
chemtool
chemtool-devel
chimes-calculator
ChipmunkPhysics
chrono
cif-tools	science/cif-tools: update 1.0.11 → 1.0.12	2024-07-29 19:01:57 -07:00
clhep
clipper
code_saturne
colt
conduit
coordgenlibs
cp2k	*/*: Cosmetic changes	2024-09-10 21:09:33 -07:00
cp2k-data	science/cp2k{,-data}: update 2024.2 → 2024.3	2024-09-10 19:45:59 -07:00
csvtk	all: Bump after lang/go121 update	2024-08-09 06:24:08 +00:00
dakota	*/*: Bump PORTVERSION of math/nlopt consumers	2024-08-25 15:33:16 +02:00
dalton
dd_package
devisor
dftbplus
dftd3
dftd4	science/{,py-}dftd4: update 3.6.0 → 3.7.0	2024-08-31 00:16:14 -07:00
dimod	science/{,py-}dimod: update 0.12.16 → 0.12.17	2024-09-05 01:48:47 -07:00
dirac
dkh
dlib-cpp
drawxtl
dssp	science/libcifpp: update 5.1.0.1 → 7.0.4	2024-07-29 19:01:57 -07:00
dvc
dwave-preprocessing
dynare
eccodes
elk	science/elk: update 10.0.1 → 10.0.15	2024-08-14 14:06:57 -07:00
elmerfem
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils
gcp	science/gcp: update 2.3.1 → 2.3.2	2024-09-09 12:09:43 -07:00
gdma
geant4
gemmi	science/{,py-}gemmi: update 0.6.6 → 0.6.7	2024-09-06 23:24:52 -07:00
getdp
ghemical
ghmm
gnudatalanguage	graphics/proj: Update to 9.4.1	2024-08-28 08:54:30 +02:00
gpaw-setups
gramps	science/gramps: Update to 5.2.3	2024-07-15 20:19:04 +01:00
grib_api
gromacs	science/gromacs: update 2024.2 → 2024.3	2024-09-09 18:32:40 -07:00
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive	science/highfive: update 2.9.0 → 2.10.0	2024-07-29 22:16:24 -07:00
hypre
iboview
InsightToolkit
InsightToolkit501
isaac-cfd
jdftx
jmol
jstrack
kalzium
kim-api
kplib
kst2	science/kst2: update to 20240825 snapshot	2024-09-04 15:56:20 +03:00
lammps	devel/kokkos: update 4.3.01 → 4.4.00	2024-08-19 12:11:44 -07:00
lamprop
latte
libaec
libccp4
libcifpp	science/libcifpp: update 5.1.0.1 → 7.0.4	2024-07-29 19:01:57 -07:00
libcint
libctl	*/*: Bump PORTVERSION of math/nlopt consumers	2024-08-25 15:33:16 +02:00
libecpint
libefp
libgetar	science/{,py-}libgetar: update 1.1.5 → 1.1.7	2024-07-16 17:42:46 -07:00
libghemical
libgridxc
libint
libint2
libint2-psi4
libkml
liblinear
libmbd
libmsym
libnegf
liboglappth
libpsml	science/libpsml: New port: Library to handle pseudopotentials in PSML format	2024-09-02 00:54:42 -07:00
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
linearelasticity
linux-zotero
luscus
m-aneos
madness
maeparser
massxpert
mbdyn
mcpl
mcstas
mcstas-comps
mctc-lib	science/mctc-lib: update 0.3.1 → 0.3.2	2024-08-31 00:16:14 -07:00
mcxtrace
mcxtrace-comps
mdynamix
medit
meep	science/meep: Add harminv run-time dependency	2024-09-05 01:48:37 -07:00
metaphysicl
minc2
mmdb2
mmg
mmtf-cpp
mol2ps
molgif	all: Bump after lang/go121 update	2024-08-09 06:24:08 +00:00
molscript
molsketch
mopac
mp2d
mpb	*/*: Bump PORTVERSION of math/nlopt consumers	2024-08-25 15:33:16 +02:00
mpqc
mrchem
mrcpp
msms
mstore
multicharge	science/multicharge: update 0.2.0 → 0.3.0	2024-08-31 00:16:13 -07:00
multiwfn
mutationpp
namd
ncrystal	science/{,py-}ncrystal: update 3.9.2 → 3.9.6	2024-08-31 00:16:13 -07:00
nest	science/nest: update 3.7 → 3.8	2024-08-03 01:27:30 -07:00
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nlcglib	science/nlcglib: update 1.0b-20230622 → 1.1.0	2024-08-19 12:11:36 -07:00
nwchem	science/nwchem: Use proper tarball	2024-09-04 15:11:18 -07:00
nwchem-data	science/nwchem{,-data}: update 7.2.2 → 7.2.3	2024-08-30 17:04:48 -07:00
ocean
octopus	*/*: Bump PORTVERSION of math/nlopt consumers	2024-08-25 15:33:16 +02:00
openbabel
openems
openkim-models
openmc	science/openmc: don't enable OPENMP without libomp	2024-08-04 14:00:50 +02:00
openmodelica
openmolcas	science/openmolcas: Fix build with gcc14	2024-09-05 14:04:30 -07:00
openmx
opensim-core	science/opensim-core: Use swig40 instead of swig	2024-07-14 04:19:04 +08:00
opensph
opsin
optench
orthanc	devel/protobuf: Update to 27.3	2024-08-15 18:55:26 +08:00
orthanc-dicomweb
orthanc-mysql
orthanc-postgresql
orthanc-webviewer
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2	*/*: Bump PORTVERSION of math/nlopt consumers	2024-08-25 15:33:16 +02:00
paje
paraview	science/paraview: Fix MPICH option	2024-09-05 14:18:35 +08:00
parthenon	science/parthenon: Use external kokkos instead of the bundled one	2024-09-09 08:42:54 -07:00
pastix
pcmsolver
PETSc	science/PETSc: update 3.21.4 → 3.21.5	2024-09-09 18:32:43 -07:00
phonopy	science/{,py-}phonopy: update 2.26.6 → 2.27.0	2024-08-24 08:03:34 -07:00
plumed
pnetcdf
polytope
precice
psi4
pulseview
py-abipy
py-access	graphics/py-geopandas: Update to 0.14.4	2024-08-28 08:54:30 +02:00
py-arbor	science/py-arbor: Fix build by adding missing gmake dependency	2024-09-06 08:58:31 -07:00
py-arch
py-asap3
py-asdf	science/py-asdf: Update to 3.4.0	2024-08-15 18:55:39 +08:00
py-asdf-standard
py-asdf-transform-schemas
py-ase	science/py-ase: update 3.22.1 → 3.23.0	2024-07-12 22:17:49 -07:00
py-atomium
py-avogadrolibs
py-boutdata
py-boututils
py-cdo	science/py-cdo: Update WWW and clean up pkg-descr	2024-07-19 00:46:26 +08:00
py-cfgrib	science/py-cfgrib: Update to 0.9.14.0	2024-07-21 17:57:09 +08:00
py-chainer	devel/protobuf: Update to 27.3	2024-08-15 18:55:26 +08:00
py-chainer-chemistry
py-chempy
py-cirq-aqt	science/py-cirq-aqt: update 1.3.0 → 1.4.1	2024-08-20 10:51:33 -07:00
py-cirq-core	science/py-cirq-core: update 1.3.0 → 1.4.1	2024-08-20 10:51:34 -07:00
py-cirq-google	science/py-cirq-google: update 1.3.0 → 1.4.1	2024-08-20 10:51:34 -07:00
py-cirq-ionq	science/py-cirq-ionq: update 1.3.0 → 1.4.1	2024-08-20 10:51:34 -07:00
py-cirq-pasqal	science/py-cirq-pasqal: update 1.3.0 → 1.4.1	2024-08-20 10:51:33 -07:00
py-cirq-rigetti	science/py-cirq-rigetti: update 1.3.0 → 1.4.1	2024-08-20 10:51:35 -07:00
py-coards
py-DendroPy
py-dftbplus
py-dftd4	science/{,py-}dftd4: update 3.6.0 → 3.7.0	2024-08-31 00:16:14 -07:00
py-dimod	science/{,py-}dimod: update 0.12.16 → 0.12.17	2024-09-05 01:48:47 -07:00
py-dipy
py-dlib
py-dwave-cloud-client	science/py-dwave-cloud-client: update 0.11.3 → 0.12.0	2024-07-14 20:00:20 -07:00
py-dwave-greedy
py-dwave-hybrid
py-dwave-inspector	science/py-dwave-inspector: update 0.5.0.post0 → 0.5.1	2024-08-31 00:16:16 -07:00
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk
py-dwave-optimization	science/py-dwave-optimization: Add USE_PYTHON=pep517	2024-07-15 09:33:30 -07:00
py-dwave-preprocessing	science/py-dwave-preprocessing: update 0.6.5 → 0.6.6	2024-07-14 20:00:19 -07:00
py-dwave-samplers	science/py-dwave-samplers: update 1.2.0 → 1.3.0	2024-07-14 20:00:19 -07:00
py-dwave-system	science/py-dwave-system: update 1.23.0 → 1.25.0	2024-07-15 00:19:27 -07:00
py-dwave-tabu
py-dwavebinarycsp
py-earthpy	graphics/py-geopandas: Update to 0.14.4	2024-08-28 08:54:30 +02:00
py-eccodes
py-emmet-core
py-esda
py-fresnel
py-gemmi	science/{,py-}gemmi: update 0.6.6 → 0.6.7	2024-09-06 23:24:52 -07:00
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy	science/py-GPy: update 1.13.1 → 1.13.2	2024-08-20 01:42:35 -07:00
py-GPyOpt
py-gsd
py-h5json
py-h5py
py-h5pyd
py-HepMC3	science/py-HepMC3: broken on powerpc	2024-08-04 14:00:16 +02:00
py-hiphive
py-HofstadterTools
py-hoomd-blue	science/py-hoomd-blue: update 4.8.1 → 4.8.2	2024-07-25 09:58:55 -07:00
py-inequality	science/py-inequality: Update WWW and clean up pkg-descr	2024-07-19 00:46:28 +08:00
py-ipygany
py-jupyter_jsmol
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib
py-liac-arff
py-libgetar	science/{,py-}libgetar: update 1.1.5 → 1.1.7	2024-07-16 17:42:46 -07:00
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mercantile	science/py-mercantile: Move science/mercantile to science/py-mercantile	2024-08-05 01:13:55 +08:00
py-meshio
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
py-mp-api
py-mpcontribs-client
py-mplhep	science/py-mplhep: update 0.3.49 → 0.3.51	2024-08-08 10:18:44 -07:00
py-mplhep-data
py-mrchem
py-ncrystal	science/{,py-}ncrystal: update 3.9.2 → 3.9.6	2024-08-31 00:16:13 -07:00
py-netCDF4
py-netcdf-flattener
py-nglview
py-nibabel
py-nilearn
py-obspy
py-oddt
py-openbabel
py-openEMS	science/py-openEMS: Remove unnecessary line	2024-08-30 10:50:55 -07:00
py-OpenFermion
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking
py-paida
py-paramz	science/py-paramz: update 0.9.5 → 0.9.6	2024-08-20 01:42:35 -07:00
py-penaltymodel
py-periodictable	science/py-periodictable: update 1.7.0 → 1.7.1	2024-07-09 02:12:11 -07:00
py-phono3py
py-phonopy	science/{,py-}phonopy: update 2.26.6 → 2.27.0	2024-08-24 08:03:34 -07:00
py-PubChemPy
py-pupynere	science/py-pupynere: Clean up pkg-descr	2024-07-19 00:46:30 +08:00
py-py3Dmol
py-pyaixi
py-pyberny
py-pycsw	graphics/py-OWSLib: Update to 0.31.0	2024-08-28 08:54:29 +02:00
py-pydicom
py-PyFR
py-pygeodesy
py-pygeometa	graphics/py-OWSLib: Update to 0.31.0	2024-08-28 08:54:29 +02:00
py-pygmo2	*/*: Bump PORTVERSION of math/nlopt consumers	2024-08-25 15:33:16 +02:00
py-pyked
py-pymatgen
py-pymatgen-analysis-alloys
py-pymbd
py-pymol
py-PyNE
py-pyosf
py-pyprecice
py-pyqubo
py-pysal	science/py-pysal: Update to 24.1	2024-07-19 00:46:34 +08:00
py-pyscf
py-pyteomics	science/py-pyteomics: Update to 4.7.3	2024-08-05 01:14:10 +08:00
py-qcelemental	science/py-qcelemental: update 0.27.1 → 0.28.0	2024-07-12 22:17:53 -07:00
py-qcengine
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-sarpy	science/py-sarpy: Add py-sarpy 1.3.58	2024-09-05 14:11:20 +08:00
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize
py-scikit-sparse
py-scimath
py-scipy	science/py-scipy: Remove unnecessary substitution	2024-09-09 03:43:18 +08:00
py-scoria
py-sdf
py-segregation	graphics/py-geopandas: Update to 0.14.4	2024-08-28 08:54:30 +02:00
py-segyio
py-signac
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti
py-spglib	science/{,py-}spglib: update 2.4.0 → 2.5.0	2024-07-12 02:01:04 -07:00
py-tensorflow
py-thewalrus
py-tobler	graphics/py-geopandas: Update to 0.14.4	2024-08-28 08:54:30 +02:00
py-trainstation
py-trx-python
py-tweedledum
py-vedo
py-veusz
py-xbout
pybrain
pynn
q
qbox	science/qbox: update 1_78_1 → 1_78_2	2024-08-10 00:07:31 -07:00
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet
qwalk
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi	science/R-cran-Epi: Update to 2.53	2024-07-21 17:10:15 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab	science/R-cran-kernlab: Update to 0.9-33	2024-08-15 03:12:49 +00:00
R-cran-ks
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: Fix fetch by caching unstable font distfile	2024-09-06 23:24:53 -07:00
rmf
rubygem-ai4r
rubygem-cdo	science/rubygem-cdo: Update WWW and clean up pkg-descr	2024-07-19 00:47:17 +08:00
rubygem-rgeo
rubygem-rgeo-geojson	science/rubygem-rgeo-geojson: Update to 2.2.0	2024-07-24 19:45:20 +08:00
rubygem-rgeo-proj4	graphics/proj: Update to 9.4.1	2024-08-28 08:54:30 +02:00
rubygem-rgeo-shapefile
rubygem-ruby-netcdf
salome-configuration
salome-kernel
scidavis
sciplot
segyio
serac
shelxle	science/shelxle: update 1.0.1670 → 1.0.1672	2024-08-20 22:09:32 -07:00
siconos	science/siconos: update 4.4.0 → 4.5.0	2024-08-01 22:09:50 -07:00
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simple-dftd3	science/simple-dftd3: update 1.0.0 → 1.1.0	2024-07-28 14:25:26 -07:00
simsmith
sirius	science/sirius: update 7.5.2 → 7.6.0	2024-08-23 20:45:45 -07:00
smoldyn
sparta	science/sparta: update 18Jul2022 → 4Sep2024	2024-09-04 20:01:34 -07:00
spglib	science/{,py-}spglib: update 2.4.0 → 2.5.0	2024-07-12 02:01:04 -07:00
spheral	science/spheral: update 2024.01.1 → 2024.06.1	2024-07-12 07:41:23 -07:00
step
tblite
teem
tfel
tfel-edf
thermofun	science/thermofun: update 0.4.5 → 0.5.0	2024-07-26 01:57:56 -07:00
tinker
trilinos	science/trilinos: update 15-1-1 → 16-0-0	2024-08-23 14:41:05 -07:00
ttk
tweedledum
udunits	science/udunits: Update WWW and clean up pkg-descr	2024-07-19 00:45:09 +08:00
ukrmol+
v_sim
vipster
vmd
voro++
votca	science/votca: update 2024 → 2024.1	2024-07-17 08:17:16 -07:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero	science/zotero: Really fix plist	2024-09-08 09:54:46 +02:00
zx
Makefile	science/parthenon: New port: Portable block-structured Adaptive Mesh Refinement (AMR) framework	2024-09-07 13:43:27 -07:00