Yuri Victorovich aa9a35be04 biology/sigviewer: New port: Viewing application for biosignals		2021-08-17 00:05:37 -07:00
..
abyss
ad2vcf
artemis
avida
babel
bamtools	biology/bamtools: Update to 2.5.2	2021-07-06 13:10:54 -05:00
bbmap
bcftools	biology/bcftools: Update to 1.13	2021-07-12 08:30:10 -05:00
bedtools
bioawk
biococoa
biolibc
bioparser
biosig	biology/biosig: Add DISTNAME instead of DISTVERSIONSUFFIX	2021-08-16 19:57:30 -07:00
biosoup
biostar-tools	biostar-tools: Correct category for py-ont-fast5-api	2021-08-13 09:16:27 -05:00
bolt-lmm
bowtie
bowtie2
bwa
canu
cd-hit
cdbfasta
checkm
clustal-omega
clustalw
cufflinks
cytoscape
ddocent
diamond	biology/diamond: Update to 2.0.11-1	2021-07-06 10:15:24 -03:00
dsr-pdb
edlib
emboss
erminej	biology/erminej: Analyses of gene sets, e.g. gene expression profiling	2021-07-09 07:26:58 -05:00
exonerate
fasta
fasta3
fastahack
fastdnaml
fastool
fastp
fastqc
fasttree
fastx-toolkit
figtree
fluctuate
freebayes
garlic
gatk
gcta
gemma
generand
gff2ps
gmap
gperiodic
graphlan
groopm
haplohseq
hhsuite	biology/hhsuite: fix build on powerpc64*	2021-07-08 13:13:54 +00:00
hisat2
hmmer
htslib	htslib: Update to 1.13	2021-07-12 08:16:45 -05:00
hyphy
igv
infernal
iolib
iqtree
jalview
jellyfish
kallisto
lamarc
libbigwig
libgtextutils
libsbml
linux-foldingathome
mafft
mapm3
migrate
minimap2
mmseqs2
molden
mopac
mothur
mrbayes
mummer
muscle
ncbi-blast+
ncbi-cxx-toolkit
ncbi-entrez-direct
ncbi-toolkit
ncbi-vdb
ngs-sdk
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Cluster
p5-Bio-Coordinate
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-DB-EMBL
p5-Bio-DB-NCBIHelper	biology/p5-Bio-DB-NCBIHelper: Update to 1.7.7	2021-07-06 22:56:10 +08:00
p5-Bio-FeatureIO
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-Bio-Variation
p5-BioPerl
p5-BioPerl-Run
p5-transdecoder
p5-TrimGalore
paml
pbbam
pbseqan
peak-classifier
pear-merger
phrap
phred
phyml
picard-tools
plink
pooler
primer3
prodigal
prodigy-lig
protomol
psi88
py-bigwig
py-biom-format
py-biopython
py-bx-python
py-crossmap
py-cutadapt
py-dnaio
py-ete3
py-Genesis-PyAPI
py-gffutils
py-goatools
py-gtfparse
py-hits
py-loompy
py-macs2
py-multiqc
py-ont-fast5-api	biology/py-ont-fast5-api: Interface to Oxford Nanopore .fast5 files	2021-08-13 08:34:09 -05:00
py-orange3-bioinformatics
py-orange3-single-cell
py-pandas-charm
py-pyfaidx
py-pysam
py-resdk
py-scikit-bio
py-xenaPython
pyfasta
python-nexus
rainbow
rampler
readseq
recombine
ruby-bio
rubygem-bio
rubygem-bio-executables
rubygem-bio-old-biofetch-emulator
rubygem-bio-shell
samtools	biology/samtools: Update to 1.13	2021-07-12 08:24:26 -05:00
scrm
seaview	biology/seaview: in preparation to FLTK update, unbreak the port	2021-08-14 08:58:03 +00:00
seqan
seqan1
seqan3	biology/seqan3: Add the 'test' target (currently broken due to lacking clang support)	2021-08-13 10:08:56 -07:00
seqan-apps
seqio
seqkit	biology/seqkit: Add 'test' target	2021-08-14 11:53:27 -07:00
seqtk
sigviewer	biology/sigviewer: New port: Viewing application for biosignals	2021-08-17 00:05:37 -07:00
sim4
slclust
smithwaterman
snpeff
spoa
sra-tools
stacks
star
stringtie
subread
tabixpp
taxonkit
treekin
treepuzzle
trimadap
trimmomatic
tRNAscan-SE
ucsc-userapps
ugene
unikmer	biology/unikmer: Add 'test' target	2021-08-14 11:35:11 -07:00
vcf2hap
vcf-split
vcflib
vcftools
velvet
viennarna
vsearch
vt
wise
Makefile	biology/sigviewer: New port: Viewing application for biosignals	2021-08-17 00:05:37 -07:00