Baptiste Daroussin f0a8714b3a Convert to USES=dos2unix ... With hat: portmgr		2014-05-26 06:55:07 +00:00
..
ariadne
artemis
avida
babel
biococoa
biojava
blast	Multiple ports: reset maintainers	2014-05-26 02:33:38 +00:00
blat
boinc-simap
chemeq
clustalw	Multiple ports: reset maintainers	2014-05-26 02:33:38 +00:00
consed	Replace maintainer's email address with one that seems to work	2014-05-10 18:07:52 +00:00
crux
embassy
emboss	Convert all :U to :tu and :L to :tl	2014-05-05 09:45:36 +00:00
fasta
fasta3
fastdnaml
fluctuate
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
lagan
lamarc
libsbml	- Update to 5.10.0	2014-05-13 07:04:17 +00:00
linux-foldingathome
mafft	- Update to 7.149	2014-05-20 19:35:30 +00:00
mapm3
migrate
molden	Catch a couple of missing convertsion to :tu/:tl	2014-05-05 11:15:53 +00:00
mopac
mrbayes
mummer
muscle	Convert to USES=dos2unix	2014-05-26 06:55:07 +00:00
ncbi-toolkit
njplot
ortep3
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB	- update to 1.31	2014-05-16 13:33:02 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl
p5-bioperl-run
paml
phd2fasta	Replace maintainer's email address with one that seems to work	2014-05-10 18:07:52 +00:00
phrap	Replace maintainer's email address with one that seems to work	2014-05-10 18:07:52 +00:00
phred	Replace maintainer's email address with one that seems to work	2014-05-10 18:07:52 +00:00
phylip
phyml
platon
plink
plinkseq
povchem
primer3	Quote ${CC} and similar variables in MAKE_ARGS.	2014-05-20 19:32:39 +00:00
protomol
psi88
py-biopython
pycogent
pyfasta
pymol
python-nexus
recombine
ruby-bio
seaview	- Update to 4.5.1	2014-05-21 05:40:53 +00:00
seqan
seqio
seqtools	biology/seqtools: 4.25 -> 4.26, fix broken distinfo by upgrading	2014-05-02 19:00:04 +00:00
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE	Support stage	2014-05-05 10:26:15 +00:00
ugene
velvet
wise
xmolwt
Makefile