Sunpoet Po-Chuan Hsieh b52921dbd8 - Simplify Makefile ...

- Use tab instead of space
- Sort PLIST
- Pass maintainership to perl@

2015-01-18 22:49:09 +00:00

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ariadne

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artemis

Cleanup plist

2014-10-20 07:10:48 +00:00

avida

Cleanup plist

2014-12-20 17:27:08 +00:00

babel

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biococoa

Cleanup plist

2014-10-20 07:10:48 +00:00

biojava

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blat

Update to upstream version 36

2015-01-01 18:17:53 +00:00

chemeq

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clustalw

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consed

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crux

Cleanup plist

2014-10-20 07:10:48 +00:00

emboss

Bump portrevision after png update

2014-12-25 20:54:41 +00:00

fasta

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fasta3

Cleanup plist

2014-10-20 07:10:48 +00:00

fastdnaml

Cleanup plist

2014-10-20 07:10:48 +00:00

fluctuate

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garlic

Cleanup plist

2014-10-20 07:10:48 +00:00

gff2ps

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gmap

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gperiodic

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grappa

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hmmer

Cleanup plist

2014-10-20 07:10:48 +00:00

htslib

HTSlib is an implementation of a unified C library for accessing common file

2014-12-14 22:35:07 +00:00

iolib

- Update to 1.13.8

2015-01-14 13:15:49 +00:00

jalview

Cleanup plist

2014-10-20 07:10:48 +00:00

lagan

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lamarc

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libsbml

- Convert USE_PYTHON -> USES leftovers missed in the previous commits

2015-01-04 08:23:23 +00:00

linux-foldingathome

Cleanup plist

2014-12-20 17:27:08 +00:00

mafft

Cleanup plist

2014-10-20 07:10:48 +00:00

mapm3

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migrate

- Update to 3.6.5

2014-12-06 14:54:48 +00:00

molden

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mopac

- Upadate biology/mopac to version 1.15

2014-12-16 22:10:23 +00:00

mrbayes

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mummer

Cleanup plist

2014-10-20 07:10:48 +00:00

muscle

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ncbi-blast+

Fix PKGNAMEPREFIX of biology/ncbi-blast+, so that the resulting package is

2014-12-31 00:31:55 +00:00

ncbi-toolkit

Cleanup plist

2014-10-20 07:10:48 +00:00

njplot

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ortep3

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p5-AcePerl

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-ASN1-EntrezGene

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-Das

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-Das-Lite

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-GFF3

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-Glite

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-Graphics

- Update to 2.39

2014-12-07 07:44:06 +00:00

p5-Bio-MAGETAB

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-NEXUS

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-Bio-Phylo

- Update to 0.58

2014-12-07 04:41:47 +00:00

p5-Bio-SCF

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-bioperl

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

p5-bioperl-run

- Simplify Makefile

2015-01-18 22:49:09 +00:00

paml

Cleanup plist

2014-10-20 07:10:48 +00:00

phrap

- Fix various distinfo errors

2014-10-16 08:55:30 +00:00

phred

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phylip

- Update to version 3.696

2014-11-02 14:13:59 +00:00

phyml

Convert to USES=autoreconf

2014-12-28 19:14:13 +00:00

platon

Mark BROKEN: Unfetchable

2015-01-10 09:41:07 +00:00

plink

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plinkseq

- Update to 0.10

2014-10-12 03:16:10 +00:00

povchem

Cleanup plist

2014-12-20 17:27:08 +00:00

primer3

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protomol

Bump portrevision after png update

2014-12-25 20:54:41 +00:00

psi88

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py-biopython

- Convert ports from benchmarks/ and biology/ to new USES=python

2014-10-19 07:38:11 +00:00

pycogent

- Convert ports from benchmarks/ and biology/ to new USES=python

2014-10-19 07:38:11 +00:00

pyfasta

- Convert ports from benchmarks/ and biology/ to new USES=python

2014-10-19 07:38:11 +00:00

python-nexus

- Convert ports from benchmarks/ and biology/ to new USES=python

2014-10-19 07:38:11 +00:00

recombine

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ruby-bio

Cleanup plist

2014-10-20 07:10:48 +00:00

samtools

Samtools implements various utilities for post-processing alignments in the

2014-12-15 21:59:19 +00:00

seaview

Change my non-FreeBSD MAINTAINER mail to bofh@

2014-12-24 00:14:11 +00:00

seqan

Cleanup plist

2014-10-20 07:10:48 +00:00

seqio

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seqtools

biology/seqtools: 4.30 -> 4.31

2014-12-13 18:10:31 +00:00

sim4

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ssaha

Cleanup plist

2014-12-20 17:27:08 +00:00

t_coffee

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tinker

biology/tinker: 6.2.6 -> 7.0.1

2015-01-04 15:21:12 +00:00

treepuzzle

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treeviewx

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tRNAscan-SE

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ugene

Update to version 1.15.1.

2015-01-06 05:28:58 +00:00

velvet

Change the way Perl modules are installed, update the default Perl to 5.18.

2014-11-26 13:08:24 +00:00

wise

Cleanup plist

2014-12-20 17:27:08 +00:00

xmolwt

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Makefile

Remove expired ports:

2015-01-01 01:13:11 +00:00