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71 lines
1.9 KiB
Makefile
71 lines
1.9 KiB
Makefile
# ex:ts=8
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# New ports collection makefile for: fasta3
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# Date created: 29 January 2001
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# Whom: Johann Visagie <johann@egenetics.com>
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#
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# $FreeBSD$
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#
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PORTNAME= fasta3
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PORTVERSION= 34.t25.d9
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CATEGORIES= biology
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MASTER_SITES= ftp://ftp.virginia.edu/pub/fasta/ \
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${MASTER_SITE_LOCAL}
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MASTER_SITE_SUBDIR= pav
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DISTNAME= fasta${PORTVERSION:S/.//g}
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EXTRACT_SUFX= .shar.Z
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MAINTAINER= fernan@iib.unsam.edu.ar
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COMMENT= A collection of programs for searching DNA and protein databases
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NO_CDROM= May not be sold or incorporated into a commercial product
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WRKSRC= ${WRKDIR}/${PORTNAME}
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SUB_FILES= pkg-message
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MAKEFILE= Makefile.freebsd
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XDIR= ${PREFIX}/bin
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FASTA_HOST!= /usr/bin/uname -n
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MAKE_ENV+= THR_LIBS=${PTHREAD_LIBS} XDIR=${XDIR} \
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FASTA_HOST='"${FASTA_HOST}"'
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FASTA3_DOCS= README COPYRIGHT FASTA_LIST fasta3x.me fasta3x.doc \
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fasta20.doc fasta_func.doc readme.* fasta.defaults
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DATA= *.mat
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EXAMPLES= *.aa *.lc *.seq
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MAN1= fasta3.1 fastf3.1 fasts3.1 map_db.1 prss3.1
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MLINKS= fasta3.1 tfasta3.1 fasta3.1 fastx3.1 fasta3.1 tfastx3.1 \
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fasta3.1 fasty3.1 fasta3.1 tfasty3.1 fasta3.1 ssearch3.1 \
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fastf3.1 tfastf3.1 fasts3.1 tfasts3.1
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do-extract:
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@ ${RM} -rf ${WRKDIR}
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@ ${MKDIR} ${WRKSRC}
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@ for file in ${EXTRACT_ONLY}; do \
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cd ${WRKSRC} && (${GZCAT} ${DISTDIR}/$${file} | ${SH} >/dev/null); \
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done
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post-install:
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${INSTALL_DATA} ${WRKSRC}/fastlibs ${PREFIX}/etc/fastlibs.sample
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@ ${MKDIR} ${DATADIR}
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.for data in ${DATA}
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${INSTALL_DATA} ${WRKSRC}/${data} ${DATADIR}
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.endfor
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@ ${MKDIR} ${EXAMPLESDIR}
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.for ex in ${EXAMPLES}
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${INSTALL_DATA} ${WRKSRC}/${ex} ${EXAMPLESDIR}
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.endfor
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.for manpage in ${MAN1}
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@ ${INSTALL_MAN} ${WRKSRC}/${manpage} ${MAN1PREFIX}/man/man1/
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.endfor
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.if !defined(NOPORTDOCS)
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@ ${MKDIR} ${DOCSDIR}
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.for docfile in ${FASTA3_DOCS}
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@ ${INSTALL_DATA} ${WRKSRC}/${docfile} ${DOCSDIR}
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.endfor
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.endif
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@ ${CAT} ${PKGMESSAGE}
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.include <bsd.port.mk>
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