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53 lines
1.4 KiB
Makefile
53 lines
1.4 KiB
Makefile
# New ports collection makefile for: dna-qc
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# Date created: 25 Novemeber 2001
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# Whom: Tony Maher <tonym@biolateral.com.au>
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#
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# $FreeBSD$
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#
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PORTNAME= dna-qc
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PORTVERSION= 1993.07.26
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CATEGORIES= biology
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MASTER_SITES= ftp://ftp.tigr.org/pub/software/qc/
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DISTNAME= qc
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EXTRACT_SUFX= .tar.Z
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MAINTAINER= ports@FreeBSD.org
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COMMENT= A quality control algorithm for DNA sequencing projects
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NO_WRKSUBDIR= true
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EXAMPLES= README script.compare script.limits \
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bact.all chromosomeIII.all human.all worm.all
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PROGRAMS= counter hybridize normalize random_clip random_line
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.include <bsd.port.pre.mk>
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.if ${ARCH} == "alpha" && ${OSVERSION} >= 502102
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BROKEN= "Does not compile"
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.endif
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post-patch:
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@${REINPLACE_CMD} -e 's,^CFLAGS,#CFLAGS,' ${WRKSRC}/Makefile
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@${REINPLACE_CMD} -e 's,malloc.h,stdlib.h,' ${WRKSRC}/normalize.c
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@${REINPLACE_CMD} -e 's,fname\*,fname,' ${WRKSRC}/random_line.c
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@${REINPLACE_CMD} -e 's,static void allocate_pool,void allocate_pool,' \
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${WRKSRC}/stringpool.c
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do-install:
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.for file in ${PROGRAMS}
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${INSTALL_PROGRAM} ${WRKSRC}/${file} ${PREFIX}/bin
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${STRIP_CMD} ${PREFIX}/bin/${file}
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.endfor
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.if !defined(NOPORTDOCS)
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@${MKDIR} ${DOCSDIR}
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${INSTALL_DATA} ${WRKSRC}/qc_doc/* ${DOCSDIR}
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${INSTALL_DATA} ${WRKSRC}/surprize_doc/* ${DOCSDIR}
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@${MKDIR} ${EXAMPLESDIR}
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.for file in ${EXAMPLES}
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${INSTALL_DATA} ${WRKSRC}/${file} ${EXAMPLESDIR}
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.endfor
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.endif
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.include <bsd.port.post.mk>
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