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84 lines
2.3 KiB
Makefile
84 lines
2.3 KiB
Makefile
# ex:ts=8
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# New ports collection makefile for: WU BLAST
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# Date created: 27 May 2004
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# Whom: Fernan Aguero <fernan@iib.unsam.edu.ar>
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#
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# $FreeBSD$
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#
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PORTNAME= wu-blast
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PORTVERSION= 2.0
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PORTREVISION= 20060101
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CATEGORIES= biology
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MASTER_SITES= #
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EXTRACT_SUFX= .tar.Z
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MAINTAINER= fernan@iib.unsam.edu.ar
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COMMENT= WU BLAST, a software package for sequence similarity searches
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# Distfiles change rapidly, but since they can only be downloaded from
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# the author, this is not a problem.
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IGNOREFILES= ${DISTFILES}
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RESTRICTED= "License does not allow redistribution of binaries. You should first register for the software, which is free for academic use."
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ONLY_FOR_ARCHS= i386
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NO_BUILD= yes
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DOWNLOAD_URL= http://blast.wustl.edu/licensing
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NO_WRKSUBDIR= yes
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PKGMESSAGE= ${WRKDIR}/pkg-message
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PORTDOCS= COPYRIGHT FAQ-Indexing.html HISTORY LICENSE Memory.html \
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README.html parameters.html
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BINS= blasta gb2fasta gt2fasta memfile nrdb pam patdb \
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pir2fasta sp2fasta xdformat xdget
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SCRIPTS= wu-blastall wu-formatdb
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BLASTA_LINKS= blastn blastp blastx tblastn tblastx
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XDFORMAT_LINKS= setdb pressdb
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.include <bsd.port.pre.mk>
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.if ${OSVERSION} < 500000
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DISTNAME= blast${PORTVERSION:S/.0//}.freebsd-4.x-i686
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.else
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DISTNAME= blast${PORTVERSION:S/.0//}.freebsd-i686
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.endif
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.if !exists(${DISTDIR}/${DISTNAME}${EXTRACT_SUFX})
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IGNORE= "You must manually fetch ${PORTNAME}${PORTVERSION:S/.0//} for the FreeBSD platform \(${DISTNAME}${EXTRACT_SUFX}\) from ${DOWNLOAD_URL}, place it in ${DISTDIR} and then run make again"
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.endif
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post-patch:
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@${SED} -e 's,%%DATADIR%%,${DATADIR},g' < ${FILESDIR}/pkg-message.in > ${PKGMESSAGE}
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do-install:
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.for bin in ${BINS}
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${INSTALL_PROGRAM} ${WRKSRC}/${bin} ${PREFIX}/bin
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.endfor
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.for script in ${SCRIPTS}
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${INSTALL_SCRIPT} ${WRKSRC}/${script} ${PREFIX}/bin
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.endfor
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${CHMOD} a-rw,a+x ${PREFIX}/bin/blasta
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.for blink in ${BLASTA_LINKS}
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@(cd ${PREFIX}/bin && ${LN} -s blasta ${blink})
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.endfor
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.for xlink in ${XDFORMAT_LINKS}
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@(cd ${PREFIX}/bin && ${LN} -s xdformat ${xlink})
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.endfor
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.if !defined (NOPORTDOCS)
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@${MKDIR} ${DOCSDIR}
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.for doc in ${PORTDOCS}
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${INSTALL_MAN} ${WRKSRC}/${doc} ${DOCSDIR}
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.endfor
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.endif
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${MKDIR} ${DATADIR}
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${CP} -R ${WRKSRC}/matrix ${DATADIR}
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${CP} -R ${WRKSRC}/filter ${DATADIR}
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${CP} ${WRKSRC}/sysblast.sample ${DATADIR}
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post-install:
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@${CAT} ${PKGMESSAGE}
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.include <bsd.port.post.mk>
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