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freebsd-ports/math
William Grzybowski 6afaa267f3 math/py-fastcluster: Python functions for hierarchical clustering
Fastcluster provides Python functions for hierarchical clustering. It generates
hierarchical clusters from distance matrices or from vector data.

Part of this module is intended to replace the functions
    linkage, single, complete, average, weighted, centroid, median, ward
in the module scipy.cluster.hierarchy with the same functionality but much
faster algorithms. Moreover, the function 'linkage_vector' provides
memory-efficient clustering for vector data.

The interface is very similar to MATLAB's Statistics Toolbox API to make code
easier to port from MATLAB to Python/Numpy. The core implementation of this
library is in C++ for efficiency.

WWW: http://danifold.net/fastcluster.html

PR:		ports/184931
Submitted by:	Johannes Jost Meixner <xmj chaot.net>
2013-12-18 11:12:40 +00:00
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aamath
abacus
abakus
abs
add - Update to 20131208 2013-12-10 04:56:34 +00:00
algae
algotutor
alt-ergo
analitza
ann
apc
aribas
armadillo Convert LIB_DEPENDS for ports depending on boost 2013-12-12 13:01:40 +00:00
arpack
arpack-ng Update to 3.1.4 2013-11-20 17:20:57 +00:00
arpack++ Given nothing is built USE_GCC is uselss 2013-12-13 15:33:42 +00:00
asir2000
asymptote
atlas
atlas-devel
bamg
bargraph
biggles - Fix the usage of 'python' to get rid of the implicit lang/python 2013-12-15 21:33:13 +00:00
bihar
blacs
blas
blitz++
blocksolve95
calc
calcoo
calctool
cantor Add an explicit dependency on pkgconf (needed for LibSpectre and Qalculate detection) 2013-12-14 09:01:59 +00:00
carve Convert LIB_DEPENDS for ports depending on boost 2013-12-12 13:01:40 +00:00
cblas
ccmath
cgal
chaco
chryzodus - Remove leading article from COMMENT 2013-11-10 23:13:21 +00:00
clarence
clasp - Unbreak with clang and new C++ world. 2013-11-01 15:53:37 +00:00
clipper
cln
cloog - Bump PORTREVISION 2013-11-13 14:15:03 +00:00
clp
coinmp - Update from 1.7.1 to 1.7.2 2013-11-16 14:30:42 +00:00
concorde
convertall
coq
crlibm
cvc3 - Try to fix build with USE_GCC, anyway, cvc4 is out and would be ported later 2013-11-13 15:55:09 +00:00
dcdflib
diehard
dieharder
djbfft multiple: sync LEGAL 2013-12-12 05:05:56 +00:00
drgeo - Support staging 2013-11-28 04:53:20 +00:00
dynare
e
edenmath
eigen2
eigen3 Support staging 2013-11-10 17:46:39 +00:00
eispack
elmer-umfpack
emacs-calc
emc2 math/emc2: modernize port 2013-12-12 04:45:14 +00:00
ent
entropy
ess Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
eukleides
eval
facile
fann
fbm Fix pkgname collision by renaming to fbm-math 2013-11-22 07:43:56 +00:00
fflas-ffpack
fftw
fftw3
fftw3-float
fftw3-long
fftw3-quad
fftw-float
fityk
fpc-fftw
fpc-gmp
fpc-numlib
freefem
freemat [Errno 11] Resource Temporarily Unavailable 2013-12-16 18:24:49 +00:00
freemat-mpi
fricas
fxt
galculator
gambit - Update to 13.1.1 2013-12-12 09:37:51 +00:00
gap
gcalctool
gdcalc - Return almost all of my ports back to the pool. I have no time to make any 2013-11-29 07:37:52 +00:00
geg
geogebra-i18n
geonext
gexpr
ggobi math/ggobi: allow staging 2013-11-04 17:43:48 +00:00
giacxcas
GiNaC
givaro
gkmap
glgraph
glm Pet portlint. 2013-11-05 10:06:11 +00:00
glpk
gmm++
gmp The MCPU_OPTS conditional block currently incorrectly sets ABI=64 for 2013-12-14 04:47:22 +00:00
gmp-ecm
gnubc
gnumeric Update to 1.12.9. 2013-12-02 21:21:35 +00:00
gnuplot Disable the PDF option as it pulls in a dependency on pdflib which is 2013-11-05 17:08:05 +00:00
goblin
gotoblas
grace
gracetmpl
graphthing
gretl Update to 1.9.13 2013-11-20 08:34:26 +00:00
gri
grpn Convert to staging, add missing includes. 2013-11-05 15:52:36 +00:00
gsl
hs-Agda
hs-categories
hs-comonad
hs-comonad-transformers
hs-comonads-fd
hs-contravariant
hs-data-lens
hs-data-lens-template
hs-distributive
hs-erf
hs-groupoids
hs-ieee754
hs-math-functions
hs-mwc-random
hs-nats
hs-NumInstances
hs-pointed
hs-probability
hs-semigroupoid-extras
hs-semigroupoids
hs-semigroups
hs-statistics
hs-vector-space
igraph
isabelle
ised Update to 2.5.0 2013-11-02 15:52:27 +00:00
itl
jacal
jags
jakarta-commons-math
jakarta-commons-math3
jama
javanns
javaview
jeuclid
jlatexmath
jsmath
jsmath-fonts
jsmath-fonts-sprite
jtransforms
jts
kalgebra
kash3
kbruch
kcalc
kig Convert LIB_DEPENDS for ports depending on boost 2013-12-12 13:01:40 +00:00
kktdirect
kmplot
labplot math/labplot: update to 2.0.0.beta1 2013-11-02 14:48:00 +00:00
lambda
lapack
lapack95
lapack++
lapacke
laspack
ldouble
levmar
libflame
libjbigi
liblbfgs
libmissing Ensure that libmissing functions can replace imprecise base system variants -- thanks 2013-11-13 01:38:47 +00:00
libneural
libocas
liborigin
libqalculate
libR
libranlip
libRmath
libtommath
libtsnnls
linpack
lll_spect
lp_solve
lrng
ltl
ltl2ba
lybniz
mate-calc Say hello to Mate 1.6. 2013-11-23 11:39:07 +00:00
mathomatic
matio
matlab-R2012a-installer
matrix
maxima Update to 5.31.3 2013-11-20 10:06:40 +00:00
mbasecalc
metis Use a versioned name for metis4, to help some tools to distinguish it from metis 2013-11-22 19:24:37 +00:00
metis4 Use a versioned name for metis4, to help some tools to distinguish it from metis 2013-11-22 19:24:37 +00:00
metis-edf Use a versioned name for metis4, to help some tools to distinguish it from metis 2013-11-22 19:24:37 +00:00
mingw32-libgmp math/mingw32-libgmp: Fix breakage on F10 2013-11-18 09:40:02 +00:00
minisat
miracl
moo
mpc
mpexpr - Fix build with Tcl 8.6 2013-11-06 14:50:24 +00:00
mpfr
mprime
msieve
mtl
mtrxmath
mumps
mumps-mpich
muparser
naturalmath
nauty
ndiff
newmat
ngraph
ntl
numdiff
nyh-hoc
ocaml-ocamlgraph
ocamlgsl Works with any modern compiler 2013-12-13 15:35:19 +00:00
octave Replace USE_FORTRAN with USES=fortran such that C/C++ code is built with 2013-12-13 13:43:17 +00:00
octave-forge
octave-forge-actuarial
octave-forge-ad
octave-forge-audio
octave-forge-base
octave-forge-bim - Update to 1.1.3. 2013-11-15 18:03:38 +00:00
octave-forge-bioinfo
octave-forge-cgi
octave-forge-civil-engineering
octave-forge-communications - Update to 1.2.0. 2013-11-29 03:47:00 +00:00
octave-forge-control - Update to 2.6.1. 2013-12-12 15:31:37 +00:00
octave-forge-data-smoothing
octave-forge-database
octave-forge-dataframe
octave-forge-dicom - Update GDCM_MAJ because of update to devel/gdcm. 2013-11-07 05:21:02 +00:00
octave-forge-econometrics
octave-forge-engine
octave-forge-fenv
octave-forge-financial
octave-forge-fits
octave-forge-fl-core - Add patch to make compatible with gcc47. 2013-12-07 19:23:05 +00:00
octave-forge-fpl
octave-forge-fuzzy-logic-toolkit
octave-forge-ga
octave-forge-general
octave-forge-generate_html
octave-forge-geometry
octave-forge-gnuplot
octave-forge-gsl
octave-forge-ident
octave-forge-image
octave-forge-informationtheory
octave-forge-integration
octave-forge-io - Update to 1.2.5. 2013-11-15 18:03:12 +00:00
octave-forge-irsa
octave-forge-linear-algebra
octave-forge-lssa
octave-forge-ltfat
octave-forge-mapping
octave-forge-mechanics
octave-forge-miscellaneous
octave-forge-missing-functions
octave-forge-msh - Update to 1.0.9. 2013-11-15 18:04:33 +00:00
octave-forge-multicore
octave-forge-nan
octave-forge-ncarray - Update to 1.0.1. 2013-11-26 02:33:07 +00:00
octave-forge-netcdf
octave-forge-nlwing2
octave-forge-nnet
octave-forge-nurbs
octave-forge-ocs
octave-forge-oct2mat
octave-forge-octcdf
octave-forge-octclip
octave-forge-octgpr
octave-forge-octproj
octave-forge-odebvp
octave-forge-odepkg
octave-forge-optim
octave-forge-optiminterp - Set make_jobs_unsafe. 2013-11-28 14:36:21 +00:00
octave-forge-outliers
octave-forge-parallel - Fix build with gcc47. 2013-12-12 20:00:58 +00:00
octave-forge-pdb
octave-forge-plot
octave-forge-pt_br
octave-forge-quaternion - Update to 2.0.3. 2013-10-31 19:28:47 +00:00
octave-forge-queueing
octave-forge-secs1d
octave-forge-secs2d
octave-forge-secs3d
octave-forge-signal
octave-forge-simp
octave-forge-sockets
octave-forge-specfun
octave-forge-special-matrix
octave-forge-spline-gcvspl
octave-forge-splines - Update to 1.2.6. 2013-11-15 18:04:03 +00:00
octave-forge-statistics
octave-forge-strings
octave-forge-struct
octave-forge-symband
octave-forge-symbolic
octave-forge-tcl-octave
octave-forge-tsa
octave-forge-video
octave-forge-xraylib
octave-forge-zenity
ogdf
oleo
open-axiom
openblas
orpie
p5-AI-DecisionTree Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-AI-Genetic Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-AI-NeuralNet-BackProp Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-AI-Perceptron Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Algorithm-Combinatorics Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Algorithm-CurveFit - Respect upstream naming: rename math/p5-MatrixReal to math/p5-Math-MatrixReal 2013-11-22 19:07:32 +00:00
p5-Algorithm-KMeans
p5-Algorithm-Munkres
p5-bignum Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Bit-ShiftReg
p5-Bit-Vector
p5-Bit-Vector-Minimal Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-CAD-Calc Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Chart-Math-Axis Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Data-Float Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Date-Handler Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Geo-Coordinates-UTM
p5-Geo-Distance Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Geo-Distance-XS
p5-GIS-Distance Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-GIS-Distance-Fast
p5-GIS-Distance-Lite
p5-Graph
p5-Math-Algebra-Symbols Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Base36
p5-Math-Base85
p5-Math-BaseCalc
p5-Math-BaseCnv
p5-Math-Bezier Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Bezier-Convert Use new USES=dos2unix 2013-11-18 16:45:09 +00:00
p5-Math-BigInt
p5-Math-BigInt-FastCalc Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-BigInt-GMP Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-BigInt-Pari Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-BigRat Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Calc-Units Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-CDF
p5-Math-Cephes
p5-Math-Combinatorics Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Complex Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-ConvexHull
p5-Math-Currency Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Derivative Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Evol Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Expr Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-FFT Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-FixedPrecision Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Geometry
p5-Math-Geometry-Planar Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Geometry-Planar-GPC Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Geometry-Planar-GPC-Polygon
p5-Math-Geometry-Planar-Offset Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Geometry-Voronoi Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-GMP Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-GMPf - Convert to new LIB_DEPENDS format 2013-12-13 08:03:53 +00:00
p5-Math-GMPq - Convert to new LIB_DEPENDS format 2013-12-13 08:03:53 +00:00
p5-Math-GMPz - Convert to new LIB_DEPENDS format 2013-12-13 08:03:53 +00:00
p5-Math-Gradient Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-GSL
p5-Math-Int64
p5-Math-Int128
p5-Math-Interpolate - Update to 1.06 2013-11-11 14:11:08 +00:00
p5-Math-Intersection-StraightLine Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Logic Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Matrix
p5-Math-MatrixReal - Respect upstream naming: rename math/p5-MatrixReal to math/p5-Math-MatrixReal 2013-11-22 19:07:32 +00:00
p5-Math-MPC Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-MPFR - Update to 3.21 2013-12-02 09:16:47 +00:00
p5-Math-NumberCruncher Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Pari Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Polygon Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Polygon-Tree
p5-Math-Polynomial-Solve Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Prime-XS
p5-Math-Random Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Random-ISAAC
p5-Math-Random-ISAAC-XS
p5-Math-Random-MT Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Random-MT-Auto Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Random-OO
p5-Math-Random-Secure
p5-Math-RandomOrg Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Round Do not try to remove empty directories created by lang/perl5.x 2013-12-07 08:57:33 +00:00
p5-Math-Round-Var Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-RPN
p5-Math-Sequence Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Series Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SigFigs
p5-Math-SimpleVariable Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Spline Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-String Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-CCompiler Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-Contains Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-ErrorPropagation Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-LaTeXDumper Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-Pattern Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-Simplification Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Symbolic-Custom-Transformation Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-BigNum Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-Complex Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-Error Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-Inline Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-NoSimplification Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-ParserExtensionFactory Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-SymbolicX-Statistics-Distributions Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-TrulyRandom
p5-Math-Units Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-Vec
p5-Math-VecStat Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Math-VectorReal
p5-NetCDF
p5-Number-Compare Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Number-Fraction
p5-Number-Uncertainty
p5-Number-WithError
p5-Number-WithError-LaTeX Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Parse-Range
p5-Roman
p5-Set-IntSpan
p5-Set-IntSpan-Fast
p5-Set-IntSpan-Fast-XS
p5-Set-Partition Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Set-Window
p5-Statistics-Basic The word 'very' has no place in COMMENT 2013-10-31 04:17:29 +00:00
p5-Statistics-Benford
p5-Statistics-ChiSquare
p5-Statistics-Contingency Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Statistics-Descriptive
p5-Statistics-Descriptive-Discrete Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Statistics-Distributions
p5-Statistics-Forecast Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Statistics-Frequency
p5-Statistics-LineFit Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Statistics-Lite
p5-Statistics-LTU
p5-Statistics-OLS
p5-Statistics-R Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
p5-Statistics-Regression
p5-Statistics-TTest Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Task-Math-Symbolic Support STAGEDIR. 2013-11-05 06:56:18 +00:00
p5-Text-AsciiTeX Support STAGEDIR. 2013-11-05 06:56:18 +00:00
pari
parmetis
parmgridgen
PDL
pear-Math_BigInteger Stage support for non-IGNORED pear classes 2013-11-25 17:59:58 +00:00
pear-Math_Combinatorics Stage support for non-IGNORED pear classes 2013-11-25 17:59:58 +00:00
pecl-big_int
pecl-bitset [Errno 11] Resource Temporarily Unavailable 2013-12-16 18:24:49 +00:00
pecl-stats
petsc math/petsc: depends explicitly on "python" 2013-12-15 16:58:20 +00:00
php5-bcmath
php5-gmp
php52-bcmath
php52-gmp
php53-bcmath - convert php53 ports to STAGE 2013-11-01 23:49:56 +00:00
php53-gmp - convert php53 ports to STAGE 2013-11-01 23:49:56 +00:00
php55-bcmath
php55-gmp
physcalc - Stagify 2013-11-29 02:59:16 +00:00
plman
ploticus
ploticus-nox11
plplot
polymake
primegen
prng
proofgeneral
pspp
pure-mpfr Update to 0.57. 2013-11-06 22:50:21 +00:00
pure-rational Update to 0.57. 2013-11-06 22:50:21 +00:00
py-apgl
py-basemap
py-basemap-data
py-bitvector
py-bottleneck math/py-bottleneck: Collection of fast NumPy array functions written in Cython 2013-12-08 14:19:34 +00:00
py-fastcluster math/py-fastcluster: Python functions for hierarchical clustering 2013-12-18 11:12:40 +00:00
py-ffc
py-fiat
py-fpconst - Update WWW: 2013-11-20 20:51:25 +00:00
py-gato
py-gmpy
py-gnuplot
py-graphillion math/py-graphillion: Update to 0.94 2013-11-30 15:54:37 +00:00
py-graphtool Convert LIB_DEPENDS for ports depending on boost 2013-12-12 13:01:40 +00:00
py-gsl
py-igraph
py-mathdom - Update WWW: 2013-11-20 20:51:25 +00:00
py-matplotlib
py-mpmath
py-munkres
py-networkx
py-numarray math/py-numarray: allow staging and use auto python plist 2013-12-12 20:18:08 +00:00
py-numeric [Errno 11] Resource Temporarily Unavailable 2013-12-16 18:24:49 +00:00
py-numexpr
py-numpy Reset maintainer for llwang@infor.org 2013-12-18 10:38:33 +00:00
py-nzmath
py-pandas math/py-pandas: stagify and add a run dependency 2013-11-22 12:54:56 +00:00
py-patsy math/py-patsy: Python package for statistical models and design matrices 2013-11-11 20:32:09 +00:00
py-plastex
py-probstat
py-pybloom
py-pymc - Update to 2.3,1 2013-12-06 15:42:33 +00:00
py-roman - Update WWW: 2013-11-20 20:51:25 +00:00
py-scientific
py-statsmodels math/py-statsmodels: Complement to SciPy for statistical computations 2013-11-22 12:40:09 +00:00
py-svgmath
py-symeig Reset maintainer for llwang@infor.org 2013-12-18 10:38:33 +00:00
py-sympy
py-ufl
py-viper
qalculate
qd
qhull Fix pkgname collision 2013-10-31 11:06:16 +00:00
qhull5 Fix pkgname collision 2013-10-31 11:06:16 +00:00
qrupdate
qtiplot - Remove now needless qmake_build from USE_QT4 2013-11-21 15:41:06 +00:00
qtiplot-doc
qtoctave
qwtplot3d-qt4 - Remove now needless qmake_build from USE_QT4 2013-11-21 15:41:06 +00:00
R Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
R-cran-bdsmatrix Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-car Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-ChangeAnomalyDetection Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-coda Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-deldir Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-dlmodeler Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-forecast Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-Formula Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-fracdiff Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-gpclib Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-gss Update math/R-cran-gss to 2.1-0. 2013-12-10 08:13:38 +00:00
R-cran-gtable Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-igraph Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-inline Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-KFAS Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-labeling Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-LearnBayes Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-MCMCpack Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-memisc Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-mvtnorm Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-nnls Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-outliers Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-psych Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-quadprog Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-RcppArmadillo Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-RHmm Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-RSvgDevice Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-sandwich Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-sm Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-sp Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-spdep Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-sspir Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-stabledist Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-SuppDists Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-xts Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-Zelig Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
R-cran-zoo Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*). 2013-11-27 18:56:43 +00:00
randlib
rapid
reed-solomon
rkward-kde4 - Fix CMAKE_BUILD_TYPE usage 2013-12-03 15:13:57 +00:00
rngstreams
rocs Convert LIB_DEPENDS for ports depending on boost 2013-12-12 13:01:40 +00:00
ros-geometry
rpcalc
rpy Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
rpy2 Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1; 2013-11-13 08:19:34 +00:00
ruby-algebra - Return almost all of my ports back to the pool. I have no time to make any 2013-11-29 07:37:52 +00:00
ruby-fftw3
ruby-gnuplot
ruby-gsl
ruby-narray
ruby-narray_miss
ruby-numru_misc
ruby-numru_units
saga - Update graphics/*opencv* to 2.4.7 2013-12-04 02:51:00 +00:00
sage - Update to 5.13. 2013-12-17 20:41:37 +00:00
sc
scalapack
scilab
scilab-toolbox-sivp - Update graphics/*opencv* to 2.4.7 2013-12-04 02:51:00 +00:00
scilab-toolbox-swt
sdpa
sdpa-gmp
sdpara
sedumi
sfft
simd-viterbi
slatec
slgrace Remove unecessary PORTDOCS definition 2013-12-13 12:58:42 +00:00
snns
solitaire
spar
spblas
speedcrunch
spooles
spooles-mpich
stp
suitesparse
superlu
superlu_mt
surf
tablix
taucs
testu01
tetgen
timbl
tomsfastmath
topaz
triangle
trlan
truthtable
tvmet math/tvmet: fix build with clang 2013-11-30 11:04:51 +00:00
ufc Convert LIB_DEPENDS for ports depending on boost 2013-12-12 13:01:40 +00:00
umatrix
ump - Fix package name collision 2013-11-23 15:18:03 +00:00
units
unixstat
unuran
vtk5 - Respect CMAKE_BUILD_TYPE (and fix packaging with non-default build settings) 2013-12-03 11:30:55 +00:00
vtk5-data
wcalc
wfmath
wingz
wingz3
wxMaxima
x12arima
xblas
xgobi
xgraph
xlapack
xldlas
xlispstat
xplot
xppaut
xspread
yacas
Makefile math/py-fastcluster: Python functions for hierarchical clustering 2013-12-18 11:12:40 +00:00