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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-22 00:35:15 +00:00
freebsd-ports/biology
2014-03-14 12:59:33 +00:00
..
ariadne
artemis
avida
babel
biococoa
biojava
blast
blat
boinc-simap
chemeq
clustalw
consed
crux Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
embassy
emboss
fasta
fasta3
fastdnaml
finchtv
fluctuate
garlic - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
genpak
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
lagan
lamarc
libgenome Deprecate a few old unmaintained ports 2014-03-11 21:21:14 +00:00
libsbml
linux-foldingathome
mafft - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
mapm3
migrate
molden Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
mopac - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
mrbayes
mummer - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
muscle - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
ncbi-toolkit
njplot
ortep3 Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
p5-AcePerl
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl
p5-bioperl-run
paml Support staging 2014-03-14 12:59:33 +00:00
phd2fasta
phrap
phred
phylip - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
phyml
platon Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
plink Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
plinkseq
povchem
primer3 Support staging 2014-03-14 12:35:03 +00:00
protomol
psi88 Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
py-biopython Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
pycogent Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
pyfasta Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
pymol - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
python-nexus
rasmol
recombine
ruby-bio
seaview
seqan Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
seqio
seqtools
sim4
ssaha biology/ssaha: undeprecate, this port fetches and builds fine. 2014-03-09 09:39:50 +00:00
t_coffee Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
tinker Update the default version of GCC used in the Ports Collection from 2014-03-10 20:55:20 +00:00
treepuzzle
treeviewx
tRNAscan-SE
ugene
velvet - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
wise
xmolwt - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
Makefile