..
2d-rewriter
- Update to 1.4
2010-01-12 03:02:16 +00:00
2dhf
- Change sed delimiters away from ,
2009-10-04 20:26:01 +00:00
abinit
- Bump PORTREVISION to chase the update of math/gsl
2010-03-29 01:12:27 +00:00
afni
- update to 1.4.1
2010-03-28 06:47:48 +00:00
at
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
avogadro
- update to 1.4.1
2010-03-28 06:47:48 +00:00
bblimage
bft
Trying to chase Zlib's upgrade in -CURRENT.
2010-05-01 12:34:56 +00:00
bodr
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
brian
- update to 1.4.1
2010-03-28 06:47:48 +00:00
buddy
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
cdcl
- update to 1.4.1
2010-03-28 06:47:48 +00:00
cdf
- Update to 3.3.0
2010-01-21 21:14:54 +00:00
cdo
- Update to 1.4.3
2010-05-05 12:40:59 +00:00
cgnslib
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
checkmol
Checkmol is a command-line utility program which reads molecular
2009-09-19 09:53:55 +00:00
chemical-mime-data
- update to 1.4.1
2010-03-28 06:47:48 +00:00
chemtool
- update to 1.4.1
2010-03-28 06:47:48 +00:00
chemtool-devel
- update to 1.4.1
2010-03-28 06:47:48 +00:00
clhep
- Update to 2.0.4.6
2010-03-12 12:28:58 +00:00
colt
crf++
- Update to 0.53
2010-04-20 03:36:51 +00:00
dcl
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
devisor
dtiquery
- Chase math/vtk5 update
2010-04-03 15:36:30 +00:00
ecs
- update to 1.4.1
2010-03-28 06:47:48 +00:00
elmer-eio
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
elmer-fem
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
elmer-hutiter
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
elmer-matc
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
elmer-meshgen2d
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
elmergrid
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
elmerpost
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
euler
- update to 1.4.1
2010-03-28 06:47:48 +00:00
fastcap
fasthenry
felt
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
flounder
- update to 1.4.1
2010-03-28 06:47:48 +00:00
fvm
- Chase relocation of net/mpich2
2009-11-28 10:44:56 +00:00
g3data
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gamess
Fix SMP run on amd64, and bump port revision
2010-02-16 23:53:17 +00:00
gave
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gchemutils
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gdis
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gerris
Presenting GNOME 2.30.1 for FreeBSD. The offical release notes for this
2010-05-10 21:19:08 +00:00
getdp
- Bump PORTREVISION to chase the update of math/gsl
2010-03-29 01:12:27 +00:00
ghemical
- update to 1.4.1
2010-03-28 06:47:48 +00:00
ghmm
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
gnudatalanguage
- Bump PORTREVISION to chase the update of math/gsl
2010-03-29 01:12:27 +00:00
gramps
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gromacs
- Bump PORTREVISION to chase the update of math/gsl
2010-03-29 01:12:27 +00:00
gsmc
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gsystem
- update to 1.4.1
2010-03-28 06:47:48 +00:00
gtamsanalyzer
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
gwyddion
- update to 1.4.1
2010-03-28 06:47:48 +00:00
harminv
Harminv is a free program (and accompanying library) to solve the problem
2010-01-02 02:54:00 +00:00
hdf
- update to jpeg-8
2010-02-05 11:46:55 +00:00
hdf5
- Add CONFLICTS with science/hdf5-18
2009-12-10 19:15:13 +00:00
hdf5-18
- Fixed WWW: link
2010-05-05 14:53:19 +00:00
hdf-java
The HDF Java Products include a visual tool for browsing and editing HDF
2010-02-13 11:21:53 +00:00
hs-bio
This is a collection of Haskell data structures and algorithms useful for
2010-01-03 05:02:13 +00:00
ics
- update to 1.4.1
2010-03-28 06:47:48 +00:00
InsightToolkit
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
isaac-cfd
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
jmol
- Update to 11.8.7
2009-10-09 13:07:57 +00:00
kmovisto
- update to 1.4.1
2010-03-28 06:47:48 +00:00
kst
Update to 1.9.1
2010-04-25 11:14:36 +00:00
kst2
Update to 1.9.1
2010-04-25 11:14:36 +00:00
lamprop
- Allow to build with MAKE_JOBS_SAFE
2009-03-31 07:52:12 +00:00
libctl
- Update to 3.1
2010-01-24 02:11:31 +00:00
libghemical
- Mark BROKEN: does not compile
2010-03-02 23:08:23 +00:00
libint
Update to 1.1.4
2009-02-02 02:53:05 +00:00
libkml
libkml is a library for use with applications that want to
2009-10-07 11:10:21 +00:00
liblinear
- Update to 1.5
2009-10-29 11:09:53 +00:00
liboglappth
- Update X.org ports to 7.4+ (few ports are more recent than the katamari).
2009-01-23 16:28:36 +00:00
libquantum
libquantum is a C library for the simulation of quantum
2009-08-14 20:02:07 +00:00
libsvm
Update to 2.91 which includes a new rewritten Python interface
2010-04-05 10:24:25 +00:00
libsvm-python
Update to 2.91 which includes a new rewritten Python interface
2010-04-05 10:24:25 +00:00
linsmith
- update to 1.4.1
2010-03-28 06:47:48 +00:00
mayavi
- update to 1.4.1
2010-03-28 06:47:48 +00:00
mbdyn
- Chase relocation of net/mpich2
2009-11-28 10:44:56 +00:00
mcstas
- update to 1.4.1
2010-03-28 06:47:48 +00:00
medit
- Update X.org ports to 7.4+ (few ports are more recent than the katamari).
2009-01-23 16:28:36 +00:00
meep
Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation
2010-01-25 00:27:10 +00:00
minc
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
2009-08-02 19:36:34 +00:00
minc2
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
2009-08-02 19:36:34 +00:00
mol2ps
mol2ps is a freely available command-line utility program which reads
2009-09-19 11:02:46 +00:00
mpb
- Bump PORTREVISION to chase the update of libctl
2010-01-24 02:14:17 +00:00
mpqc
- update to 1.4.1
2010-03-28 06:47:48 +00:00
mpqc-mpich
ncs
- update to 1.4.1
2010-03-28 06:47:48 +00:00
netcdf
- Update WWW
2009-09-16 08:11:37 +00:00
netcdf4
- Update to 4.1.1
2010-04-22 03:25:38 +00:00
netcdf-ftn
- Fix Fortran linking
2009-03-22 22:09:27 +00:00
nifticlib
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
oases
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
omnetpp
- update to 1.4.1
2010-03-28 06:47:48 +00:00
openbabel
Builds on ia64.
2009-11-11 16:12:14 +00:00
ovt
- update to 1.4.1
2010-03-28 06:47:48 +00:00
p5-Algorithm-SVMLight
- Update to 0.09
2009-06-05 22:56:07 +00:00
p5-Chemistry-3DBuilder
Perl module which generates a three-dimensional molecular structure from a
2010-04-02 15:33:52 +00:00
p5-Chemistry-Bond-Find
Perl module which provides functions for detecting the bonds in a molecule from
2010-04-02 15:24:14 +00:00
p5-Chemistry-Canonicalize
Perl module which provides functions for "canonicalizing" a molecular
2010-04-02 15:25:12 +00:00
p5-Chemistry-Elements
- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks
2009-07-22 16:27:08 +00:00
p5-Chemistry-File-MDLMol
Perl module which will parse a SMARTS (SMiles ARbitrary Target Specification)
2010-04-02 15:34:39 +00:00
p5-Chemistry-File-Mopac
MOPAC 6 input file reader/writer
2010-04-02 15:32:24 +00:00
p5-Chemistry-File-PDB
p5-Chemistry-File-PDB reads and writes PDB files. The PDB file format
2009-05-17 12:51:49 +00:00
p5-Chemistry-File-SLN
SLN linear notation parser/writer
2010-04-02 15:33:24 +00:00
p5-Chemistry-File-SMARTS
Perl module which will parse a SMARTS (SMiles ARbitrary Target Specification)
2010-04-02 15:34:39 +00:00
p5-Chemistry-File-SMILES
Perl module which parses a SMILES (Simplified Molecular Input Line Entry
2010-04-02 15:35:47 +00:00
p5-Chemistry-File-VRML
Generate VRML models for molecules
2010-04-02 15:28:04 +00:00
p5-Chemistry-File-XYZ
XYZ molecule format reader/writer
2010-04-02 15:28:42 +00:00
p5-Chemistry-FormulaPattern
Match molecule by formula
2010-04-02 15:31:34 +00:00
p5-Chemistry-InternalCoords
Perl module implements an object class for representing internal
2010-04-02 15:35:23 +00:00
p5-Chemistry-Isotope
Perl module which contains the exact mass data from the table of the isotopes.
2010-04-02 15:26:37 +00:00
p5-Chemistry-MacroMol
Chemistry-MacroMol is a toolkit includes basic objects and methods to
2009-05-17 13:00:50 +00:00
p5-Chemistry-MidasPattern
Select atoms in macromolecule
2010-04-02 15:29:58 +00:00
p5-Chemistry-Mok
- Update to 0.25
2010-04-05 23:25:24 +00:00
p5-Chemistry-Mol
Chemistr-Mol is a toolkit includes basic objects and methods to
2009-05-16 23:29:15 +00:00
p5-Chemistry-Pattern
Perl module which implements basic pattern matching for molecules.
2010-04-02 15:25:56 +00:00
p5-Chemistry-Reaction
Explicit chemical reactions
2010-04-02 15:32:03 +00:00
p5-Chemistry-Ring
Perl module which provides some basic methods for representing a ring.
2010-04-02 15:27:22 +00:00
p5-Geo-ReadGRIB
- Update to 1.21
2009-11-22 03:15:14 +00:00
p5-Geo-WebService-Elevation-USGS
Geo::WebService::Elevation::USGS executes elevation queries against the
2010-01-15 07:20:43 +00:00
p5-PerlMol
Perl modules for molecular chemistry
2010-04-02 15:36:26 +00:00
paje
paraview
- fix build for png-1.4.1
2010-03-30 04:48:54 +00:00
pcp
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
peekabot
- Mark BROKEN on sparc64
2010-05-04 11:43:33 +00:00
pnetcdf
- Update to 1.1.1
2010-02-02 22:43:01 +00:00
psi3
Build fix with gotoblas.
2010-02-16 07:23:49 +00:00
psychopy
- update to 1.4.1
2010-03-28 06:47:48 +00:00
py-DendroPy
- Update to 3.2.0
2010-03-30 01:24:46 +00:00
py-h5py
- Add py-numpy into RUN_DEPENDS
2010-02-01 11:27:58 +00:00
py-hcluster
- update to 1.4.1
2010-03-28 06:47:48 +00:00
py-mdp
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
py-mlpy
- Bump PORTREVISION to chase the update of math/gsl
2010-03-29 01:12:27 +00:00
py-netCDF4
- Update to 0.9.1
2010-04-11 23:28:17 +00:00
py-openbabel
Update to 2.2.2
2009-08-10 17:14:49 +00:00
py-paida
- Get rip python 2.3+
2009-12-13 17:00:14 +00:00
py-pydicom
py-scipy
- Update to 0.7.2
2010-04-26 07:17:47 +00:00
pybrain
PyBrain is a modular Machine Learning Library for Python.
2009-11-19 13:44:38 +00:00
pycdf
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
pyvox
qcl
qtresistors
- update to 1.4.1
2010-03-28 06:47:48 +00:00
ruby-dcl
- update to 1.4.1
2010-03-28 06:47:48 +00:00
ruby-gphys
- Update to 1.0.0
2010-04-28 06:00:33 +00:00
ruby-netcdf
- Assign all unmaintained ruby ports to ruby@,
2009-06-16 15:53:25 +00:00
silo
- update to 1.4.1
2010-03-28 06:47:48 +00:00
simlib
Not for powerpc, either.
2010-04-01 10:24:44 +00:00
svmlight
- Update to 6.02
2009-04-11 20:37:01 +00:00
szip
-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.
2009-08-02 19:36:34 +00:00
udunits
- Update to 2.1.14
2010-03-08 23:14:22 +00:00
v_sim
Upgrade to 3.5.1.
2010-04-25 19:57:37 +00:00
vis5d+
- update to 1.4.1
2010-03-28 06:47:48 +00:00
vmd
- update to 1.4.1
2010-03-28 06:47:48 +00:00
x11iraf
xmakemol
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
xmds
- Switch SourceForge ports to the new File Release System: categories starting with P,R,S
2009-08-22 00:35:32 +00:00
Makefile
Perl modules for molecular chemistry
2010-04-02 15:36:26 +00:00