John Marino af93a9e79e biology/blast: Deprecate for removal after 4 September 2014 ... This unstaged port will be removed for legal reasons. PR: 190626 Submitted by: Muhammad Rahman Approved by: portmgr (implicit)		2014-06-19 11:55:50 +00:00
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ariadne
artemis
avida
babel
biococoa
biojava	- add stage support	2014-06-01 10:37:22 +00:00
blast	biology/blast: Deprecate for removal after 4 September 2014	2014-06-19 11:55:50 +00:00
blat
boinc-simap
chemeq
clustalw	Multiple ports: reset maintainers	2014-05-26 02:33:38 +00:00
consed	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
crux
embassy	biology/embassy: specify post-extraction with ${TAR}	2014-05-29 10:47:58 +00:00
emboss	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
fasta
fasta3
fastdnaml
fluctuate
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
iolib	- I forgot to svn add a new patch	2014-05-31 18:03:08 +00:00
jalview
lagan
lamarc
libsbml
linux-foldingathome
mafft	Add DOCS and EXAMPLE options to biology/mafft	2014-05-31 04:18:18 +00:00
mapm3
migrate
molden
mopac
mrbayes
mummer	Reset the 99 ports still listed under sylvio@	2014-06-11 18:55:29 +00:00
muscle	Update to 3.8.31.	2014-06-17 21:36:06 +00:00
ncbi-toolkit
njplot	- add stage support	2014-06-01 11:26:39 +00:00
ortep3
p5-AcePerl	Remove all the bootstrap files (.bs) from the plists.	2014-06-10 12:14:12 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics	Stagify, remove BROKEN.	2014-06-07 01:54:41 +00:00
p5-Bio-MAGETAB	- update to 1.31	2014-05-16 13:33:02 +00:00
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF	Remove all the bootstrap files (.bs) from the plists.	2014-06-10 12:14:12 +00:00
p5-bioperl	- Update to 1.6.923	2014-05-30 15:46:05 +00:00
p5-bioperl-run
paml
phd2fasta	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
phrap
phred
phylip
phyml
platon
plink
plinkseq
povchem
primer3	Quote ${CC} and similar variables in MAKE_ARGS.	2014-05-20 19:32:39 +00:00
protomol
psi88
py-biopython
pycogent
pyfasta
pymol
python-nexus	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
recombine
ruby-bio
seaview	- Update to 4.5.2	2014-06-04 06:28:56 +00:00
seqan	- add stage support	2014-06-01 11:42:17 +00:00
seqio
seqtools	Remove all space characters from Makefile assignments.	2014-06-08 19:51:27 +00:00
sim4
ssaha
t_coffee	Remove indefinite articles and trailing periods from COMMENT, plus	2014-06-09 11:21:52 +00:00
tinker
treepuzzle
treeviewx	Unbreak	2014-06-04 20:08:15 +00:00
tRNAscan-SE
ugene
velvet	Update to 1.2.10.	2014-06-17 21:39:44 +00:00
wise
xmolwt
Makefile