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c9368d48f9
freebsd-ports/biology
History
Sunpoet Po-Chuan Hsieh c9368d48f9 - Add LICENSE 
- Add NO_ARCH
- Use BROKEN_RUBY22
- While I'm here, use single space after WWW:

Approved by:	portmgr (blanket)
With hat:	ruby
2015-09-03 16:23:37 +00:00
..
ariadne
artemis
avida - Unbreak on PowerPC by using atomicops implementation for Linux and GCC 2015-09-02 12:29:09 +00:00
babel Unbreak the build on PowerPC (at least) by always using va_copy() macro for 2015-09-02 10:10:06 +00:00
bcftools New port: biology/bcftools 2015-06-05 21:01:13 +00:00
biococoa MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
biojava
blat
chemeq
clustalw MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
consed
crux Unbreak the build on PowerPC, it had nothing to do with "error in pthreads": 2015-09-02 09:23:05 +00:00
emboss
fasta - Do not falsely advertise that PowerPC build runs out of space and fails 2015-09-02 10:35:25 +00:00
fasta3 - Update to 36.3.7a 2015-05-07 02:33:57 +00:00
fastdnaml
fluctuate Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
garlic
gff2ps Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
gmap
gperiodic
grappa
hmmer
htslib Update ports in the [bcd]* categories to not use GH_COMMIT. 2015-05-06 15:16:53 +00:00
iolib - Update to 1.14.0 2015-07-12 18:25:07 +00:00
jalview Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
lagan - Fix shebangs 2015-06-11 10:17:24 +00:00
lamarc
libsbml Switch to USES=iconv:build. 2015-08-25 13:15:17 +00:00
linux-foldingathome
mafft Use BROKEN helpers 2015-06-27 14:30:19 +00:00
mapm3
migrate - Update options 2015-06-28 15:30:41 +00:00
molden
mopac
mrbayes
mummer Fix build on mips by properly respecting compiler and flags 2015-08-05 12:18:41 +00:00
muscle
ncbi-blast+ - Unbreak 2015-05-04 06:08:59 +00:00
ncbi-toolkit
njplot
ortep3 Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
p5-AcePerl After r390893, chmod u+w/u-w for stripping perl XS modules is unnecessary, 2015-06-29 15:47:44 +00:00
p5-Bio-ASN1-EntrezGene Start removing MASTER_SITE_SUBDIR=CPAN:username where possible. The 2015-06-24 15:16:23 +00:00
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS - Add NO_ARCH 2015-05-31 13:37:20 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl - Fix shebangs 2015-05-30 12:31:59 +00:00
p5-bioperl-run
paml
phrap
phred
phylip Unbreak 2015-07-28 17:52:11 +00:00
phyml
platon Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
plink
plinkseq
povchem Remove $FreeBSD$ from patches files in categories a-j. 2015-05-22 13:34:20 +00:00
primer3
protomol Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
psi88 - Strip binaries 2015-06-03 17:27:08 +00:00
py-biopython Update to 1.65. 2015-08-05 10:32:31 +00:00
pycogent
pyfasta
python-nexus
recombine
ruby-bio - Add LICENSE 2015-09-03 16:23:37 +00:00
samtools Update ports in the [bcd]* categories to not use GH_COMMIT. 2015-05-06 15:16:53 +00:00
seaview biology/seaview: Update version 4.5.4=>4.5.4.4 2015-05-22 11:09:23 +00:00
seqan
seqio
seqtools biology/seqtools: 4.35 -> 4.36 2015-08-08 11:22:24 +00:00
sim4
ssaha
t_coffee MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
tinker Convert ports to use the options helpers in categories [abc]*, and minor fixes. 2015-08-19 13:29:59 +00:00
treepuzzle
treeviewx
tRNAscan-SE
ugene biology/ugene: qt4-linguist -> qt4-linguisttools 2015-08-18 20:02:45 +00:00
velvet
wise
xmolwt Fix previous commit. 2015-08-19 13:41:51 +00:00
Makefile New port: biology/bcftools 2015-06-05 21:01:13 +00:00