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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-22 04:17:44 +00:00
freebsd-ports/science
2018-01-04 11:54:56 +00:00
..
2d-rewriter
afni Mark more recently failing ports broken on aarch64. 2017-12-19 14:41:29 +00:00
aircraft-datcom Add new port science/aircraft-datcom 2017-12-03 21:26:18 +00:00
ALPSCore New port: science/ALPSCore: Generic algorithms and utilities for condensed matter physics 2017-12-03 19:29:13 +00:00
avogadro New USES=eigen 2018-01-02 16:49:24 +00:00
bddsolve devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
bft - Fix LICENSE 2017-12-06 09:00:23 +00:00
bodr
brian Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
buddy
cdcl For ports that are marked BROKEN on armv6, and also fail to build on 2017-11-30 06:13:34 +00:00
cdf For ports that are marked BROKEN on armv6, and also fail to build on 2017-11-30 06:13:34 +00:00
cdo Update to 1.9.2 2017-12-12 13:32:53 +00:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemps2 New port: science/chemps2: Spin-adapted implementation of DMRG for ab initio quantum chemistry 2017-11-23 05:58:51 +00:00
chemtool
chemtool-devel
clhep
colt
crf++
dcl
devisor
dkh New port: science/dkh: Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction 2017-11-13 06:08:40 +00:00
dlpoly-classic
ecs Chase metis-edf's upgrade. 2017-11-16 20:55:27 +00:00
epte
erd New port: science/erd: AcesIII electron repulsion integrals 2017-11-14 18:44:05 +00:00
fastcap
fasthenry
fisicalab Fix configure options for gnustep-make 2017-12-03 12:23:53 +00:00
fvcom
fvcom-mpi
fvm
gchemutils
gdma New port: science/gdma: Anthony Stone's Gaussian Distributed Multipole Analysis 2017-11-18 05:12:35 +00:00
getdp
ghemical
ghmm
gnudatalanguage New USES=eigen 2018-01-02 16:49:24 +00:00
gramps Cleanup Mk/Uses/gnome.mk. 2018-01-03 13:22:31 +00:00
grib_api Update to 1.25.0 2017-12-27 19:51:35 +00:00
gromacs devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
gsmc
gtamsanalyzer Fix configure options for gnustep-make 2017-12-03 12:23:53 +00:00
gwyddion Security update OpenEXR and ilmbase to 2.2.1. 2017-12-01 01:58:23 +00:00
h5utils
harminv
hdf Also not for armv7. Missed in previous sweep. 2017-11-30 06:43:49 +00:00
hdf5
hdf5-18 Forgot to bump revision of FORTRAN libs in the previous commit. 2017-12-03 15:30:23 +00:00
hs-bio
hypre
iboview devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
InsightToolkit science/InsightToolkit: Modify patch to use ${CMAKE_DL_LIBS} 2018-01-03 12:26:39 +00:00
isaac-cfd
jstrack
kalzium New USES=eigen 2018-01-02 16:49:24 +00:00
kst2 Update to 4.5.0 2017-10-21 20:18:16 +00:00
lamprop science/lamprop: Update to 3.4 2017-12-29 14:25:16 +00:00
libaec Update to 1.0.2 2017-11-12 19:09:54 +00:00
libctl
libefp science/libefp: Update to 1.5.0 2017-12-23 18:19:11 +00:00
libgeodecomp devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
libghemical
libint
libkml devel/google{test,mock}: update to 1.8.0.450 2017-12-27 19:47:20 +00:00
liblinear
liboglappth
libquantum
libsvm
libsvm-python
libxc
linsmith
massxpert
mbdyn
mcstas science/mcstas: switch back to PORTVERSION 2017-12-06 16:18:35 +00:00
mcstas-comps
mcxtrace New port: science/mcxtrace: Monte Carlo X-ray tracing package 2017-12-05 19:15:49 +00:00
medit
meep Fix options usage. 2017-10-27 12:19:20 +00:00
mei Switch from swig1.3 to swig 3.0 2017-12-20 12:25:18 +00:00
metaf2xml Fix whitespace issues (mixed tab/spaces, alignment) in a few ports. 2017-10-31 14:51:53 +00:00
minc2 Update to 4.5.0 2017-10-21 20:18:16 +00:00
mol2ps
MOOSE-neural-simulator New port: science/MOOSE-neural-simulator: Multiphysics Object Oriented Simulation Environment 2017-12-19 16:04:34 +00:00
mpb
mpqc
mpqc-mpich
ncs - Those ports fail to build with python3 2017-12-12 12:40:15 +00:00
netcdf Update WWW 2017-12-11 10:37:14 +00:00
netcdf-cxx Update WWW 2017-12-11 10:37:19 +00:00
netcdf-fortran Update WWW 2017-12-11 10:37:24 +00:00
nifticlib
openbabel New USES=eigen 2018-01-02 16:49:24 +00:00
openkim For ports that are explicitly enabled on armv6, also enable them 2017-10-10 21:31:30 +00:00
orthanc devel/google{test,mock}: update to 1.8.0.450 2017-12-27 19:47:20 +00:00
orthanc-dicomweb devel/google{test,mock}: update to 1.8.0.450 2017-12-27 19:47:20 +00:00
orthanc-postgresql devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
orthanc-webviewer devel/google{test,mock}: update to 1.8.0.450 2017-12-27 19:47:20 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
paje Fix configure options for gnustep-make 2017-12-03 12:23:53 +00:00
paraview science/paraview: Unbreak build with clang 4.0 2017-12-13 03:34:37 +00:00
pcmsolver New port: science/pcmsolver: API for the Polarizable Continuum Model 2017-11-14 18:05:42 +00:00
PETSc e-added port: science/PETSc: Suite of data structures and routines from Argonne National Laboratory (existed 2004/11/21-2014/09/01, deleted in r366959) 2017-12-21 00:26:58 +00:00
pnetcdf
psychopy Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
pulseview science/pulseview: Update to version 0.4.0, switch to QT5. 2017-10-11 21:50:30 +00:00
py-cdo Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-coards
py-DendroPy Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-h5py Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-hcluster Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-mdp Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-mlpy Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-netCDF4 Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-obspy - Update to 1.1.0 2017-12-16 06:11:08 +00:00
py-paida Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-pupynere
py-pyaixi
py-pydicom
py-pymol - Canonicalize LIB_DEPENDS 2017-12-19 20:06:09 +00:00
py-pysal Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-pyteomics Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-pyteomics.biolccc Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-qspin New port: science/py-qspin: Learn quantum spin and entanglement 2017-11-10 21:55:26 +00:00
py-scikit-fuzzy Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-scikit-learn Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-scikit-sparse Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-scimath Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-scipy Remove dependency on swig 2017-12-20 15:25:16 +00:00
py-scoria Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-tensorflow Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
py-ws2300
pybrain Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
pycdf Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
pynn - Update to 0.9.2 2018-01-04 11:54:56 +00:00
qcl
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-fastICA science/R-cran-fastICA: FastICA Algorithms to Perform ICA and Projection Pursuit 2017-12-18 12:31:46 +00:00
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rubygem-ai4r Update LICENSE 2017-09-24 18:49:56 +00:00
rubygem-cdo
rubygem-ruby-dcl
rubygem-ruby-netcdf Update to 4.5.0 2017-10-21 20:18:16 +00:00
sigrok-cli science/sigrok-cli: Update to version 0.7.0. 2017-10-11 21:48:56 +00:00
sigrok-firmware
sigrok-firmware-fx2lafw science/sigrok-firmware-fx2laf: Update to version 0.1.5. 2017-10-11 21:48:08 +00:00
sigrok-firmware-utils Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
silo
simlib For ports that are marked NOT_FOR/ONLY_FOR armv6, also mark them so 2017-11-30 05:55:17 +00:00
simsmith
step New USES=eigen 2018-01-02 16:49:24 +00:00
svmlight
szip
tfel Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
udunits Update to 2.2.26 2017-12-23 16:49:28 +00:00
v_sim Update to 4.5.0 2017-10-21 20:18:16 +00:00
veusz Convert Python ports to FLAVORS. 2017-11-30 15:50:30 +00:00
vmd Update to 4.5.0 2017-10-21 20:18:16 +00:00
voro++
xfce4-equake-plugin
xmakemol
Makefile Re-added port: science/py-pymol: OpenGL based molecular visualization system (existed 2002/08/13-2014/09/01, deleted in r366862) 2017-12-19 19:49:17 +00:00