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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-12 03:00:28 +00:00
freebsd-ports/science
Yuri Victorovich 141e15dbe5 science/tinker: Update 8.10.1 -> 8.10.2
Reported by:	portscout
2022-04-14 10:08:20 -07:00
..
2d-rewriter Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
abinit textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
afni textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
agrum science/agrum: Update 0.22.0 -> 0.22.1 2021-09-13 15:28:57 -07:00
aircraft-datcom One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
ALPSCore One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
antioch math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
apbs One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
ascent science/ascent: Update 0.7.1-66 -> 0.8.0 2022-02-13 13:35:46 -08:00
atompaw science/atompaw: Update 4.1.1.0 -> 4.2.0.0 2022-03-26 20:19:39 -07:00
avogadro2 science/avogadro2: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:22 -08:00
avogadrolibs science/avogadrolibs: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:21 -08:00
axom science/axom: mark BROKEN on powerpc 2021-12-23 22:25:51 +00:00
bagel One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
bddsolve Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
berkeleygw One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
bodr Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
buddy Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
cantera science/cantera: For OCTAVE option, fix .mex file path 2021-12-22 01:24:51 -08:00
cdcl Deorbit RESTRICTED && NO_CDROM, part two. 2021-05-06 13:47:48 +02:00
cdf *: Clean up some things 2022-01-17 14:20:25 +01:00
cdk One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
cdo science/cdo: fix build on powerpc64le with LLVM 13.0.0 2022-03-29 06:14:10 +00:00
cgnslib graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
cgribex science/cgribex: fix build on powerpc64le with LLVM 13 2022-03-23 16:55:52 +00:00
checkmol lang/fpc: Fix build issue on lazarus i386 and amd64 2022-02-03 00:07:13 -05:00
chemical-mime-data textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
chemicalfun science/chemicalfun: New port: C++ library for working with chemical reactions and formulas 2022-01-18 10:42:45 -08:00
chemps2 science/chemps2: Update 1.8.11 -> 1.8.12 2022-03-11 08:59:46 -08:00
chemtool Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
chemtool-devel Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
chimes-calculator science/chimes-calculator: New port: Chebyshev Interaction Model for Efficient Simulation 2022-01-18 23:05:13 -08:00
chrono textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
clhep Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
clipper One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
code_saturne textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
colt Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
conduit science/conduit: Update 0.8.1 -> 0.8.2 2022-02-13 13:35:45 -08:00
coordgenlibs science/coordgenlibs: Update 2.0.3 -> 3.0.0 2021-09-09 13:00:09 -07:00
cp2k One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
cp2k-data One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
crf++ Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
csvtk */*: Bump PORTREVISION after lang/go 1.18 update 2022-03-30 03:01:44 -04:00
dakota science/dakota: Update 6.13.0 -> 6.15.0 2022-02-03 02:05:09 -08:00
dalton Regenerate all distfiles using gitlab as source. 2021-04-09 20:44:23 +02:00
dcl Deorbit RESTRICTED && NO_CDROM, part two. 2021-05-06 13:47:48 +02:00
devisor all: Remove all other $FreeBSD keywords. 2021-04-06 16:31:13 +02:00
dftbplus science/dftbplus: Fix tests 2022-01-16 15:30:33 -08:00
dftd4 science/dftd4: Broken on aarch64 2022-03-20 12:20:21 -07:00
dkh One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
dlib-cpp science/dlib-cpp: remove the patch that is now committed upstream and breaks the build on powerpc64le 2021-04-11 22:45:40 +00:00
drawxtl graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
dvc Unbreak ports after devel/py-gitpython's PORTNAME change 2021-04-29 13:53:44 -04:00
dynare finance/py-bitcoin: Remove LICENSE from plist 2022-01-12 13:43:11 -08:00
eccodes science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
elk science/elk: Update 8.3.22 -> 8.4.6 2022-04-08 19:30:28 -07:00
elmerfem math/vtk9: Update 9.0.3 -> 9.1.0 2021-11-22 01:40:34 -08:00
epte *: Return culot@'s ports to the pool (and perl@) after safekeeping his bit. 2021-09-06 23:13:27 +02:00
erd One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
ergo Fix CONFLICTS entries of multiple ports 2022-01-10 16:15:39 +01:00
erkale math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
erkale-pseudopotentials One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
fastcap Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
fasthenry Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
fastjet One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
fisicalab math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
fleur textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
frontistr science/frontistr adding FrontISTR 2021-04-26 12:17:38 +02:00
fsom One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
fvcom science/netcdf-fortran: Update to 4.5.4 2022-03-08 02:10:59 +08:00
fvcom-mpi *: Clean up some things 2021-10-12 17:01:38 +02:00
gabedit INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
gamess-us One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
gchemutils textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
gdma One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
getdp math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
ghemical textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
ghmm textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
gnudatalanguage science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
gpaw-setups One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
gramps cleanup: remove wrong usage of INSTALLS_OMF 2022-03-15 11:16:57 +01:00
grib_api science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
gromacs textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
gsmc Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
gtamsanalyzer Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
h5utils Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
h5z-zfp One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
harminv Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
hdf science/hdf: add back the previously removed powerpc workaround 2021-06-16 22:33:27 +00:00
hdf5 science/hdf5: Add CPE information 2021-10-14 12:26:24 +02:00
hdf5-18 science/hdf5-18: Add CPE information 2021-10-14 12:26:39 +02:00
healpix astro/cfitsio: Update to 4.0.0 2022-02-28 23:06:56 +08:00
helfem math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
hepmc3 science/hepmc3: Update 3.2.3 -> 3.2.4 2021-07-09 10:01:32 -07:00
highfive science/highfive: Update 2.3.1 -> 2.4.0 2022-04-08 00:46:03 -07:00
hypre science/hypre: Update 2.23.0 -> 2.24.0 2022-02-13 09:38:19 -08:00
iboview graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
InsightToolkit */*: Fix ENOTIME: return my ports to the pool 2021-05-22 10:13:01 +08:00
isaac-cfd Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
jdftx science/jdftx: Update 1.6.0 -> 1.7.0 2022-01-29 09:24:02 -08:00
jmol science/jmol: Update 14.32.24 -> 14.32.25 2022-02-25 10:30:50 -08:00
jstrack Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
kalzium KDE: Update KDE Gear to 21.12.3 2022-03-03 17:33:45 +01:00
kim-api science/kim-api: Update 2.2.1 -> 2.3.0 2022-03-19 18:18:45 -07:00
kst2 science/kst2: Update to 2022.02.16 snapshot 2022-03-11 19:48:57 +03:00
lammps textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
lamprop One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
latte One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
libaec science/libaec: Update to 1.0.6 2021-09-28 03:48:08 +08:00
libccp4 One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
libcint science/libcint: Update 4.4.6 -> 5.1.0 2021-12-26 12:21:24 -08:00
libctl Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
libecpint science/libecpint: Update 1.0.6 -> 1.0.7 2021-12-14 14:41:53 -08:00
libefp One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
libgeodecomp Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
libghemical science/libghemical: Remove LD_PRELOAD vecause it configured now without it 2021-09-26 10:43:55 -07:00
libgridxc science/libgridxc: Update 0.8.5 -> 0.9.6 2021-04-23 18:36:22 -07:00
libint Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
libint2 science/libint2: Update 2.6.0 -> 2.7.1 2021-11-06 16:56:36 -07:00
libkml archivers/minizip*: Add minizip-ng and zlib-ng and create USES=minizip 2022-01-25 07:35:22 +01:00
liblinear science/liblinear: Update to 2.44 2022-03-31 06:03:39 +08:00
libmbd science/libmbd: New port: Many-body dispersion library 2022-01-16 21:15:11 -08:00
libmsym One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
libnegf science/libnegf: Add options; Correct license 2022-01-17 14:41:21 -08:00
liboglappth *: fix tab vs. space issues, and comments according to the guide. 2021-10-16 11:51:39 +02:00
libquantum Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
libssm One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
libsvm *: Clean up some things 2021-10-12 17:01:38 +02:00
libsvm-python Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
libvdwxc Regenerate all distfiles using gitlab as source. 2021-04-09 20:44:23 +02:00
libxc science/libxc: update to 5.1.7 2022-01-05 16:50:13 -06:00
liggghts One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
linux-zotero science/linux-zotero: Clean up 2021-11-08 00:33:54 +01:00
luscus graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
madness One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
maeparser One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
massxpert Regenerate all distfiles using gitlab as source. 2021-04-09 20:44:23 +02:00
mbdyn science/mbdyn: fix build on powerpc64* 2021-11-08 15:52:33 +00:00
mcstas One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
mcstas-comps Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
mctc-lib science/mctc-lib: Update 0.2.4 -> 0.2.5 2022-02-27 10:35:39 -08:00
mcxtrace */*: fix trailing whitespace in pkg-descr's 2022-04-01 18:09:49 +03:00
mcxtrace-comps One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
mdynamix */*: fix trailing whitespace in pkg-descr's 2022-04-01 18:09:49 +03:00
medit graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
metaphysicl science/metaphysicl: Update 1.3.2 -> 1.3.3 2021-12-13 09:19:09 -08:00
minc2 science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
mmdb2 One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
mmtf-cpp One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
mol2ps lang/fpc: Fix build issue on lazarus i386 and amd64 2022-02-03 00:07:13 -05:00
molgif */*: Bump PORTREVISION after lang/go 1.18 update 2022-03-30 03:01:44 -04:00
molscript graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
molsketch science/molsketch: Update 0.7.1 -> 0.7.2 2021-04-07 11:47:02 -07:00
mpb Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
mpqc science/mpqc: regen plist after doxygen update (+) 2021-12-16 11:49:52 +03:00
msms Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.) 2021-10-25 12:58:29 +00:00
mstore */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
multicharge */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
multiwfn One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
namd Style: improve ONLY_FOR_ARCHS_REASON (grammar, markup, etc.) 2021-10-25 12:58:29 +00:00
nest science/nest: Update 3.1 -> 3.2 2022-01-27 12:27:58 -08:00
netcdf science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
netcdf-cxx science/netcdf-cxx: Update MASTER_SITES 2022-03-08 02:10:59 +08:00
netcdf-fortran science/netcdf-fortran: Update to 4.5.4 2022-03-08 02:10:59 +08:00
nifticlib */*: Remove redundant '-[0-9]*' from CONFLICTS 2021-10-29 11:50:18 +02:00
nwchem science/nwchem: Update 7.0.2.20211110 -> 7.0.2.20220224 2022-02-25 10:19:33 -08:00
nwchem-data One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
octopus science/octopus: Broken on aarch64 2022-03-20 11:24:41 -07:00
openbabel textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
openems science/openems: Only works on amd64 and powerpc64. 2021-11-14 16:31:37 +01:00
openkim One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
openkim-models many: Depend on vim instead of vim-console 2021-09-02 12:09:29 -06:00
openmc science/openmc: Unbreak LIBMESH option by switching to mpich 2021-10-12 13:52:17 -07:00
openmx science/openmx: Cleanup - remove unnecessary lines 2021-09-05 10:00:44 -07:00
opensim-core graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
opensph science/opensph: Only for amd64 i386 2022-03-29 14:02:08 -07:00
opsin One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
orthanc textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
orthanc-dicomweb devel/icu: update to 71.1 2022-04-07 00:39:10 +00:00
orthanc-mysql devel/jsoncpp: Update to 1.9.4 -> 1.9.5 2021-11-05 12:09:19 -07:00
orthanc-postgresql devel/jsoncpp: Update to 1.9.4 -> 1.9.5 2021-11-05 12:09:19 -07:00
orthanc-webviewer devel/icu: update to 71.1 2022-04-07 00:39:10 +00:00
p5-Algorithm-SVMLight Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-3DBuilder Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Bond-Find Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Canonicalize Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Elements science/p5-Chemistry-Elements: Update to 1.075 2021-11-06 03:15:55 +08:00
p5-Chemistry-File-MDLMol Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-Mopac Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-PDB Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-SLN Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-SMARTS Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-SMILES Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-VRML Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-File-XYZ Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-FormulaPattern Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-InternalCoords Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Isotope Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-MacroMol Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-MidasPattern Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Mok Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Mol science/p5-Chemistry-Mol: Sort PLIST 2021-07-15 00:10:34 +08:00
p5-Chemistry-Pattern Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Reaction Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Chemistry-Ring Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Geo-BUFR Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Geo-Coordinates-Converter Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Geo-Coordinates-Converter-iArea Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Geo-WebService-Elevation-USGS science/p5-Geo-WebService-Elevation-USGS: Update to 0.120 2021-11-06 03:15:56 +08:00
p5-Mcstas-Tools One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
p5-PerlMol Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
p5-Physics-Unit *: Return culot@'s ports to the pool (and perl@) after safekeeping his bit. 2021-09-06 23:13:27 +02:00
packmol One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
pagmo2 math/ipopt: Update 3.12.13 -> 3.14.4 2022-02-24 08:21:08 -08:00
paje Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
pcmsolver One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
PETSc science/PETSc: Update 3.14.1 -> 3.16.3 2022-01-07 00:34:46 -08:00
phonopy science/phonopy: Update 2.13.1 -> 2.14.0 2022-04-13 22:34:57 -07:00
plumed science/plumed: Update 2.8b -> 2.8.0 2022-02-23 09:02:06 -08:00
pnetcdf Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
pulseview INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
py-abipy One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-access Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-asdf science/py-asdf: Update to 2.11.0 2022-03-31 06:21:18 +08:00
py-asdf-standard science/py-asdf-standard: Fix typo 2022-03-25 21:37:12 +08:00
py-asdf-transform-schemas science/py-asdf-transform-schemas: Add py-asdf-transform-schemas 0.2.2 2022-03-08 02:10:52 +08:00
py-ase science/py-ase: Update 3.22.0 -> 3.22.1 2022-01-03 23:11:21 -08:00
py-avogadrolibs science/py-avogadrolibs: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:22 -08:00
py-cdo science/py-cdo: Update to 1.5.6 2022-01-24 02:50:47 +08:00
py-chainer devel/protobuf: Update to 3.19.4 2022-02-28 20:46:46 +08:00
py-chainer-chemistry One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-chempy science/py-chempy: Update 0.8.1 -> 0.8.2 2021-09-21 10:47:02 -07:00
py-cirq-aqt science/py-cirq-*: Update to 0.12.0 2021-08-12 01:57:37 -07:00
py-cirq-core science/py-cirq-core: Update 0.12.0 -> 0.13.1 2021-11-14 16:27:22 -08:00
py-cirq-google science/py-cirq-google: Update 0.13.0 -> 0.14.0 2022-03-26 20:19:39 -07:00
py-cirq-ionq science/py-cirq-ionq: Update 0.12.0 -> 0.13.1 2021-10-31 10:23:17 -07:00
py-cirq-pasqal science/py-cirq-pasqal: Update 0.13.0 -> 0.13.1 2021-10-31 10:23:18 -07:00
py-coards science/py-coards: Cosmetic change 2021-05-12 05:47:18 +08:00
py-DendroPy Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-dipy science/py-dipy: Update 1.4.0 -> 1.4.1 2021-05-06 10:59:23 -07:00
py-dlib science/py-dlib: fix build on powerpc64le 2021-04-11 17:08:35 +00:00
py-eccodes science/py-eccodes: Update to 1.4.1 2022-03-25 21:37:13 +08:00
py-esda science/py-esda: Add SHAPE option 2021-09-21 11:44:54 +08:00
py-fresnel math/qhull: Renaming ports 2022-02-18 15:15:30 -06:00
py-geolinks Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-geomet Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-geometer science/py-geometer: Update to 0.3.2 2022-01-29 07:26:49 +08:00
py-geometric One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-gpaw science/py-gpaw: Update 21.6.0 -> 22.1.0 2022-01-13 02:25:40 -08:00
py-GPy science/py-GPy: Update 1.9.9 -> 1.10.0 2021-05-22 01:33:34 -07:00
py-GPyOpt One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-gsd science/py-gsd: Update 2.5.0 -> 2.5.1 2022-01-21 02:00:30 -08:00
py-h5json science/py-h5py: Update to 3.2.1 2021-04-18 13:44:04 +08:00
py-h5py science/py-h5py: Update to 3.6.0 2021-11-22 05:15:52 +08:00
py-hiphive science/py-hiphive: Update 0.7.1 -> 1.0 2022-03-07 12:14:14 -08:00
py-hoomd-blue science/py-hoomd-blue: Update 3.0.0 -> 3.0.1 2022-04-10 16:21:51 -07:00
py-inequality science/py-inequality: Update USES=python 2021-11-06 03:14:23 +08:00
py-jupyter_jsmol science/py-jupyter_jsmol: Remove PY_PYGMENTS 2021-06-21 00:16:17 +08:00
py-kim-query One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-kinematics science/py-kinematics: Update USES=python 2021-11-06 03:14:24 +08:00
py-kliff science/py-kliff: Update 0.3.1 -> 0.3.3 2022-03-26 19:40:09 -07:00
py-liac-arff Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-libpysal science/py-libpysal: Update to 4.6.2 2022-03-25 21:37:13 +08:00
py-lifelines One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-MDAnalysis math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
py-MDAnalysisTests One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-mdp science/py-mdp: Fix build with setuptools 58.0.0+ 2022-03-25 21:38:19 +08:00
py-mmtf-python One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-molmod One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-moltemplate science/py-moltemplate: Update 2.20.2 -> 2.20.3 2022-02-27 20:08:09 -08:00
py-netCDF4 science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
py-netcdf-flattener Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-nibabel One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-nilearn science/py-nilearn: mark BROKEN 2022-03-23 14:44:26 +03:00
py-obspy science/py-obspy: Update to 1.3.0 2022-03-14 12:14:38 +08:00
py-oddt science/py-oddt: Not install tests 2022-03-25 10:28:34 -07:00
py-OpenFermion science/py-OpenFermion: Update 1.2.0 -> 1.3.0 2021-12-23 17:54:58 -08:00
py-OpenMC science/py-OpenMC: New port: Monte Carlo neutron and photon transport simulation code (Python) 2021-10-11 08:51:36 -07:00
py-openpiv science/py-openpiv: update to 0.23.8 2021-11-06 00:17:44 +03:00
py-paida science/py-paida: Fix build with setuptools 58.0.0+ 2022-03-25 21:38:19 +08:00
py-paramz One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-phono3py science/py-phono3py: Remove unnecessary build dependency on math/lapacke 2021-06-08 20:32:22 -07:00
py-phonopy science/py-phonopy: Update 2.13.1 -> 2.14.0 2022-04-10 16:21:50 -07:00
py-PubChemPy science/py-PubChemPy: New port: Simple Python wrapper around the PubChem PUG REST API 2021-07-27 06:16:51 -07:00
py-pupynere science/py-pupynere: Update USES=python 2021-11-06 03:14:24 +08:00
py-pyaixi Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-pyberny science/py-pyberny: New port: Optimizer of molecular geometries with respect to the total energy 2021-10-16 16:56:19 -07:00
py-pycsw science/py-pycsw: Update to 2.6.1 2021-10-25 23:57:35 +08:00
py-pydicom science/py-pydicom: Update to 2.3.0 2022-04-07 11:41:06 +00:00
py-PyFR science/py-PyFR: Update 1.12.3 -> 1.13.0 2022-02-26 00:14:10 -08:00
py-pygeodesy science/py-pygeodesy: Update to 22.1.22 2022-02-28 20:46:23 +08:00
py-pygeometa science/py-pygeometa: Update to 0.9.1 2022-03-25 21:37:13 +08:00
py-pygmo2 science/py-pygmo2: Update 2.16.1 -> 2.18.0 2021-08-05 09:51:47 -07:00
py-pyked devel/py-pint: Update to 0.18 2021-11-01 21:41:43 +08:00
py-pymatgen science/py-pymatgen: Update 2022.0.15 -> 2022.0.17 2022-01-14 14:18:03 -08:00
py-pymol textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
py-PyNE science/py-PyNE: Update 0.7.5 -> 0.7.6 2022-02-18 09:10:05 -08:00
py-pyosf One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-pysal science/py-pysal: Update to 2.6.0 2022-03-08 02:11:26 +08:00
py-pyscf science/py-pyscf: Unbreak fetch 2022-01-12 20:40:22 -08:00
py-pyteomics science/py-pyteomics: Update to 4.5.3 2022-03-25 21:37:13 +08:00
py-qcelemental science/py-qcelemental: Update 0.23.0 -> 0.24.0 2021-11-19 13:33:17 -08:00
py-qcengine science/py-qcengine: Update 0.22.0 -> 0.23.0 2022-03-20 08:15:52 -07:00
py-qspin science/py-qspin: Fix build with setuptools 58.0.0+ 2022-03-25 21:38:19 +08:00
py-quantities science/py-quantities: Update 0.12.5 -> 0.13.0 2022-01-14 08:48:13 -08:00
py-rmf science/{,py-}rmf: Update 1.3.1 -> 1.4 2022-03-11 08:59:47 -08:00
py-rmsd One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-ruffus One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-scikit-fuzzy Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-scikit-learn science/py-scikit-learn: Update to 1.0.2 2021-12-26 12:31:19 +08:00
py-scikit-optimize science/py-scikit-optimize: Update to 0.9.0 2021-10-25 23:57:36 +08:00
py-scikit-sparse science/py-scikit-sparse: Update 0.4.5 -> 0.4.6 2021-09-13 15:28:57 -07:00
py-scimath Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
py-scipy science/py-scipy: Update to 1.8.0 2022-03-10 15:26:35 +08:00
py-scoria One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-segregation science/py-segregation: Update to 2.1.0 2021-09-21 11:44:55 +08:00
py-segyio science/py-segyio: Fix build with setuptools 58.0.0+ 2022-03-25 21:38:19 +08:00
py-SimpleSpectral One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
py-sklearn-pandas science/py-sklearn-pandas: Add py-sklearn-pandas 2.2.0 2022-01-29 07:26:35 +08:00
py-skrebate science/py-skrebate: Update USES=python 2021-11-06 03:14:24 +08:00
py-spaghetti science/py-spaghetti: Update to 1.6.5 2022-01-24 02:50:48 +08:00
py-spglib science/{,py-}spglib: Update 1.16.2 -> 1.16.3 2022-01-29 09:24:03 -08:00
py-tensorflow devel/icu: update to 71.1 2022-04-07 00:39:10 +00:00
py-tobler science/py-tobler: Update to 0.9.0 2022-03-08 02:11:26 +08:00
py-trainstation science/py-trainstation: New port: Convenient training of linear models 2022-03-07 12:14:14 -08:00
py-veusz devel/py-qt5, devel/py-sip: Update versions 2022-03-07 18:39:13 +01:00
pybrain Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
pynn science/pynn: Update to 0.10.0 2021-12-17 16:18:50 +08:00
qbox science/qbox: Update 1.74.1 -> 1.74.2 2022-03-26 19:40:09 -07:00
qcl Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
qiskit-aer devel/libfmt: Update to 8.0.0 2021-07-22 02:11:51 +08:00
qmcpack textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
quantum-espresso One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
quantum-espresso-pseudopotentials One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
qwalk textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
R-cran-AMORE Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-bayesm Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-cmprsk science/R-cran-cmprsk: Update to 2.2-11 2022-01-09 06:54:19 +00:00
R-cran-DCluster Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-e1071 science/R-cran-e1071: Update to 1.7-9 2021-09-18 13:18:14 +00:00
R-cran-eco Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-Epi Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-epicalc Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-etm Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-FAdist science/R-cran-FAdist: upgrade to 2.4 2022-03-06 21:56:52 +01:00
R-cran-fastICA science/R-cran-fastICA: Update to 1.2-3 2021-09-25 18:13:13 -04:00
R-cran-kernlab science/R-cran-kernlab: Update to 0.9-30 2022-04-05 16:01:14 +00:00
R-cran-snow science/R-cran-snow: Update to 0.4-4 2021-10-28 10:20:03 +00:00
R-cran-som Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
R-cran-udunits2 science/R-cran-udunits2: Update to 0.13.2.1 2022-03-15 23:22:57 +00:00
rdkit science/rdkit: Update 2021.09.5 -> 2022.03.1 2022-03-28 17:38:48 -07:00
rmf science/{,py-}rmf: Update 1.3.1 -> 1.4 2022-03-11 08:59:47 -08:00
rubygem-ai4r Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
rubygem-cdo Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
rubygem-rgeo science/rubygem-rgeo: Update to 2.4.0 2022-01-26 03:51:05 +08:00
rubygem-rgeo-geojson Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
rubygem-rgeo-proj4 science/rubygem-rgeo-proj4: Update to 3.1.1 2021-11-22 02:24:31 +08:00
rubygem-rgeo-shapefile Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
rubygem-ruby-dcl Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
rubygem-ruby-netcdf science/rubygem-ruby-netcdf: Update to 0.8.0 2022-03-31 06:21:46 +08:00
scidavis devel/py-qt5, devel/py-sip: Update versions 2022-03-07 18:39:13 +01:00
segyio science/{,py-}segyio: Update 1.9.8 -> 1.9.9 2022-02-18 09:10:05 -08:00
shelxle science/shelxle: Update 1.0.1365 -> 1.0.1368 2022-03-07 12:14:14 -08:00
siconos cleanup: drop support for EOL FreeBSD 11.X 2021-09-30 23:23:30 +02:00
siesta science/siesta: Broken on aarch64, powerpc* due to lack of IEEE754 support in gcc 2021-05-18 21:07:41 -07:00
sigrok-cli INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
sigrok-firmware Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
sigrok-firmware-fx2lafw Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
sigrok-firmware-utils Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
silo Fix CONFLICTS entries of multiple ports 2022-01-10 16:15:39 +01:00
simbody graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
simgrid science/simgrid: Update 3.27 -> 3.28 2021-08-16 00:06:31 -07:00
simint One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
simlib Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
simple-dftd3 science/simple-dftd3: Update 0.5.0 -> 0.5.1 2022-01-24 13:28:00 -08:00
simsmith all: Remove all other $FreeBSD keywords. 2021-04-06 16:31:13 +02:00
smoldyn science/smoldyn: Update 2.66 -> 2.67 2021-11-06 16:56:37 -07:00
sparta science/sparta: Update 20Oct2021 -> 7Jan2022 2022-01-08 01:09:25 -08:00
spglib science/{,py-}spglib: Update 1.16.2 -> 1.16.3 2022-01-29 09:24:03 -08:00
step KDE: Update KDE Gear to 21.12.3 2022-03-03 17:33:45 +01:00
svmlight science/svmlight: fix build on 13.0+ 2021-10-29 18:01:10 +00:00
szip Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
tblite */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
teem One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
tfel science/tfel: upgrade to 4.0.0 2022-02-16 17:29:01 +01:00
tfel-edf Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
thermofun science/thermofun: Update 0.3.8 -> 0.3.9 2022-01-18 10:42:45 -08:00
tinker science/tinker: Update 8.10.1 -> 8.10.2 2022-04-14 10:08:20 -07:00
udunits Remove # $FreeBSD$ from Makefiles. 2021-04-06 16:31:07 +02:00
v_sim science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
vipster graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
vmd science/netcdf: Update to 4.8.1 2022-03-08 02:10:58 +08:00
voro++ One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
votca science/votca: Fix tests 2022-01-24 23:52:16 -08:00
wannier90 One more small cleanup, forgotten yesterday. 2021-04-07 10:09:01 +02:00
wwplot math/py-matplotlib: chase minimum Python version in dependent ports 2021-05-10 22:13:20 +02:00
wxmacmolplt graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
xcfun science/xcfun: fix build on GCC-based systems 2021-06-07 06:38:43 -05:00
xcrysden framework: Add new USES 'magick' for graphics/ImageMagick* 2021-12-11 14:50:53 +01:00
xdrawchem graphics/mesa-libs: Bump reverse deps for libglvnd 2021-06-22 11:53:08 -07:00
xtb science/xtb: update to 6.4.1 2021-11-27 11:49:53 -06:00
yoda science/yoda: Update 1.9.1 -> 1.9.4 2022-01-25 09:52:27 -08:00
zotero science/zotero: Add i386 checksum 2022-03-15 17:58:49 +01:00
Makefile science/zotero: Add new port 2022-03-15 13:41:11 +01:00