mirror of
https://git.FreeBSD.org/ports.git
synced 2024-12-24 04:33:24 +00:00
67 lines
1.6 KiB
Makefile
67 lines
1.6 KiB
Makefile
# Created by: ballen
|
|
# $FreeBSD$
|
|
|
|
PORTNAME= phyml
|
|
DISTVERSIONPREFIX= v
|
|
DISTVERSION= 3.3.20190909
|
|
PORTEPOCH= 1
|
|
CATEGORIES= biology
|
|
|
|
MAINTAINER= ports@FreeBSD.org
|
|
COMMENT= Simple, fast, and accurate algorithm to estimate large phylogenies
|
|
|
|
LICENSE= GPLv3
|
|
LICENSE_FILE= ${WRKSRC}/COPYING
|
|
|
|
USES= autoreconf libtool pkgconfig
|
|
|
|
USE_GITHUB= yes
|
|
GH_ACCOUNT= stephaneguindon
|
|
|
|
GNU_CONFIGURE= yes
|
|
CONFIGURE_ARGS= --disable-beagle
|
|
|
|
PORTDOCS= *
|
|
PORTEXAMPLES= *
|
|
PLIST_FILES= bin/phyml${BIN_SUFFIX}
|
|
|
|
OPTIONS_DEFINE= DOCS EXAMPLES
|
|
OPTIONS_RADIO= MPI
|
|
OPTIONS_RADIO_MPI= MPICH OPENMPI
|
|
|
|
MPICH_DESC= Parallel processing support via MPICH
|
|
MPICH_LIB_DEPENDS= libmpich.so:net/mpich
|
|
MPICH_MAKE_ARGS= CC="${LOCALBASE}/bin/mpicc"
|
|
OPENMPI_LIB_DEPENDS= libmpi.so:net/openmpi
|
|
OPENMPI_MAKE_ARGS= CC="${LOCALBASE}/mpi/openmpi/bin/mpicc"
|
|
|
|
.include <bsd.port.options.mk>
|
|
|
|
.if ${PORT_OPTIONS:MMPICH2} || ${PORT_OPTIONS:MOPENMPI}
|
|
CONFIGURE_ARGS+= --enable-mpi
|
|
BIN_SUFFIX= -mpi
|
|
.else
|
|
CONFIGURE_ARGS+= --disable-mpi
|
|
BIN_SUFFIX= # none
|
|
.endif
|
|
|
|
post-patch:
|
|
@${REINPLACE_CMD} -e \
|
|
's|-O2 .* $${ARCH_flag}|$${CFLAGS}|' ${WRKSRC}/configure.ac
|
|
.if ${ARCH} != amd64 && ${ARCH} != i386
|
|
@${REINPLACE_CMD} -e 's|VECTOR_FLAG=-march=native|dnl &|' ${WRKSRC}/configure.ac
|
|
.endif
|
|
@${REINPLACE_CMD} -e 's|malloc.h|stdlib.h|' ${WRKSRC}/src/utilities.h
|
|
|
|
post-install-DOCS-on:
|
|
@${MKDIR} ${STAGEDIR}${DOCSDIR}
|
|
(cd ${WRKSRC}/doc && ${INSTALL_DATA} *.pdf \
|
|
${STAGEDIR}${DOCSDIR})
|
|
|
|
post-install-EXAMPLES-on:
|
|
@${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
|
|
@(cd ${WRKSRC}/examples && ${COPYTREE_SHARE} . \
|
|
${STAGEDIR}${EXAMPLESDIR})
|
|
|
|
.include <bsd.port.mk>
|