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22 lines
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22 lines
988 B
Plaintext
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format
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intended to concisely describe reference-indexed variations between
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individuals. VCF provides a common interchange format for the description of
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variation in individuals and populations of samples, and has become the defacto
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standard reporting format for a wide array of genomic variant detectors.
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vcflib provides methods to manipulate and interpret sequence variation as it
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can be described by VCF. It is both:
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an API for parsing and operating on records of genomic variation as it can
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be described by the VCF format
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and a collection of command-line utilities for executing complex
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manipulations on VCF files.
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The API itself provides a quick and extremely permissive method to read and
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write VCF files. Extensions and applications of the library provided in the
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included utilities (*.cpp) comprise the vast bulk of the library's utility for
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most users.
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WWW: https://github.com/vcflib/vcflib
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