mirror of
https://git.FreeBSD.org/ports.git
synced 2024-12-16 03:24:07 +00:00
dc8e5f28fa
- Provide OPTIONS - Take maintainership PR: ports/94123 Submitted by: Mauricio Herrera Cuadra <mauricio@arareko.net>
67 lines
2.0 KiB
Makefile
67 lines
2.0 KiB
Makefile
# New ports collection makefile for: BioRuby
|
|
# Date created: 24 October 2001
|
|
# Whom: Akinori MUSHA aka knu <knu@idaemons.org>
|
|
#
|
|
# $FreeBSD$
|
|
#
|
|
|
|
PORTNAME= bio
|
|
PORTVERSION= 1.0.0
|
|
CATEGORIES= biology ruby
|
|
MASTER_SITES= http://bioruby.org/archive/
|
|
PKGNAMEPREFIX= ${RUBY_PKGNAMEPREFIX}
|
|
DISTNAME= ${PORTNAME}ruby-${PORTVERSION}
|
|
DIST_SUBDIR= ruby
|
|
|
|
MAINTAINER= mauricio@arareko.net
|
|
COMMENT= Integrated environment for Bioinformatics written in Ruby
|
|
|
|
OPTIONS= XMLPARSER "xmlparser support for faster Blast processing" off \
|
|
BDB4 "bdb4 support for faster flat file indexing" off \
|
|
MYSQL "MySQL database support for BioSQL" off \
|
|
PGSQL "PostgreSQL database support for BioSQL" off
|
|
OPTIONSFILE= ${PORT_DBDIR}/ruby-${PORTNAME}/options
|
|
|
|
USE_RUBY= yes
|
|
USE_RUBY_SETUP= yes
|
|
RUBY_SETUP= install.rb
|
|
|
|
.include <bsd.port.pre.mk>
|
|
|
|
.if defined(WITH_XMLPARSER)
|
|
RUN_DEPENDS+= ${RUBY_SITEARCHLIBDIR}/xmlparser.so:${PORTSDIR}/textproc/ruby-xmlparser
|
|
.endif
|
|
.if defined(WITH_BDB4)
|
|
RUN_DEPENDS+= ${RUBY_SITEARCHLIBDIR}/bdb.so:${PORTSDIR}/databases/ruby-bdb
|
|
.endif
|
|
.if defined(WITH_MYSQL)
|
|
RUN_DEPENDS+= ${RUBY_SITELIBDIR}/DBD/Mysql/Mysql.rb:${PORTSDIR}/databases/ruby-dbd_mysql
|
|
.endif
|
|
.if defined(WITH_PGSQL)
|
|
RUN_DEPENDS+= ${RUBY_SITELIBDIR}/DBD/Pg/Pg.rb:${PORTSDIR}/databases/ruby-dbd_pg
|
|
.endif
|
|
|
|
post-patch:
|
|
${RUBY} -i -pe 'gsub(%r"(/etc/bioinformatics/)") { "${PREFIX}" + $$1 }' \
|
|
${WRKSRC}/doc/Tutorial.rd \
|
|
${WRKSRC}/lib/bio/io/registry.rb
|
|
|
|
do-install:
|
|
${MKDIR} ${PREFIX}/etc/bioinformatics
|
|
.for f in etc/bioinformatics/seqdatabase.ini
|
|
${INSTALL_DATA} ${WRKSRC}/${f} ${PREFIX}/${f}.sample
|
|
if [ ! -f ${PREFIX}/${f} ]; then \
|
|
${CP} -p ${PREFIX}/${f}.sample ${PREFIX}/${f}; \
|
|
fi
|
|
.endfor
|
|
.if !defined(NOPORTDOCS)
|
|
${MKDIR} ${RUBY_MODEXAMPLESDIR}
|
|
${CP} -R ${WRKSRC}/sample/ ${RUBY_MODEXAMPLESDIR}/
|
|
${MKDIR} ${RUBY_MODDOCDIR}/ja
|
|
${INSTALL_DATA} ${WRKSRC}/ChangeLog ${WRKSRC}/README ${RUBY_MODDOCDIR}/
|
|
${INSTALL_DATA} ${WRKSRC}/doc/*.rd ${RUBY_MODDOCDIR}/
|
|
${INSTALL_DATA} ${WRKSRC}/doc/*.rd.ja ${RUBY_MODDOCDIR}/ja/
|
|
.endif
|
|
|
|
.include <bsd.port.post.mk>
|