Baptiste Daroussin 5ead879a85 Second run at cleaning out non staged ports without pending PR		2014-09-02 12:45:01 +00:00
..
ariadne	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
artemis
avida
babel	Rename biology/ patch-xy patches to reflect the files they modify.	2014-07-28 14:22:16 +00:00
biococoa
biojava
blat
boinc-simap
chemeq
clustalw
consed	update ports:	2014-08-23 18:04:58 +00:00
crux	biology/crux: stage, modernize, add license (BSD[23]CLAUSE), cleanups	2014-08-26 20:39:05 +00:00
emboss
fasta
fasta3
fastdnaml
fluctuate
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
lagan
lamarc
libsbml	- Update to 5.10.2	2014-08-10 06:21:53 +00:00
linux-foldingathome
mafft	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
mapm3
migrate
molden
mopac	- Switch to USES=libtool, drop .la files	2014-08-06 16:05:49 +00:00
mrbayes	Fix build on -current by un-clobbering LDFLAGS. Also, don't	2014-08-15 16:37:37 +00:00
mummer
muscle
ncbi-toolkit
njplot
ortep3
p5-AcePerl	Fix build. Hopefully it doesn't break the app.	2014-08-22 00:33:16 +00:00
p5-Bio-ASN1-EntrezGene	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics	Really fix.	2014-07-25 23:08:58 +00:00
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl	biology/p5-bioperl: fix pkg-descr sidenote link	2014-08-04 04:32:38 +00:00
p5-bioperl-run	biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagify	2014-08-04 08:54:10 +00:00
paml	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
phrap	update ports:	2014-08-23 18:04:58 +00:00
phred	update ports:	2014-08-23 18:04:58 +00:00
phylip
phyml
platon	Add a DOCS option.	2014-08-03 21:44:23 +00:00
plink
plinkseq
povchem	Rename biology/ patch-xy patches to reflect the files they modify.	2014-07-28 14:22:16 +00:00
primer3
protomol	- Stagify	2014-08-25 17:19:31 +00:00
psi88	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
py-biopython
pycogent
pyfasta
python-nexus
recombine
ruby-bio
seaview
seqan
seqio
seqtools	USES=execinfo	2014-08-04 23:06:21 +00:00
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
ugene	- Update Unipro UGENE and documentation to version 1.14.0	2014-09-01 07:38:59 +00:00
velvet	Convert a bunch of EXTRACT_SUFX=... into USES=tar:...	2014-07-29 19:11:51 +00:00
wise
xmolwt
Makefile	Second run at cleaning out non staged ports without pending PR	2014-09-02 12:45:01 +00:00