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39 lines
1.1 KiB
Makefile
39 lines
1.1 KiB
Makefile
# $FreeBSD$
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PORTNAME= ngs
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DISTVERSION= 2.9.2
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CATEGORIES= biology
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PKGNAMESUFFIX= -sdk
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Tools and libraries for using data in the INSDC Sequence Read Archives
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LICENSE= PD
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LICENSE_FILE= ${WRKSRC}/LICENSE
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BROKEN_aarch64= fails to configure: unsupported architecture 'FreeBSD'
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USES= gmake perl5
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GNU_CONFIGURE= yes
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USE_GITHUB= yes
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GH_ACCOUNT= ncbi
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ALL_TARGET= default
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USE_LDCONFIG= yes
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CFLAGS+= -I${WRKSRC}/ngs-sdk/ngs/unix/${ARCH}/
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post-patch:
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@cd ${WRKSRC}/ngs-sdk/ngs/unix && ${LN} -s x86_64 amd64
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do-install:
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cd ${WRKSRC}/ngs-sdk && ${COPYTREE_SHARE} ngs ${STAGEDIR}/${PREFIX}/include
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${INSTALL_PROGRAM} ${WRKSRC}/ngs-sdk/${ARCH}-portbld-*/ngs-sdk/FreeBSD/clang/${ARCH}/rel/lib/libngs-sdk.so.${DISTVERSION} ${STAGEDIR}${PREFIX}/lib/
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cd ${STAGEDIR}${PREFIX}/lib/ && \
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${LN} -s libngs-sdk.so.${DISTVERSION} libngs-sdk.so.${DISTVERSION:R:R} && \
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${LN} -s libngs-sdk.so.${DISTVERSION:R:R} libngs-sdk.so
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.for l in libngs-c++.a libngs-adapt-c++.a
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${INSTALL_LIB} ${WRKSRC}/ngs-sdk/${ARCH}-portbld-*/ngs-sdk/FreeBSD/clang/${ARCH}/rel/lib/${l}.${PORTVERSION} ${STAGEDIR}${PREFIX}/lib/${l}
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.endfor
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.include <bsd.port.mk>
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