mirror of
https://git.FreeBSD.org/ports.git
synced 2024-10-20 20:09:11 +00:00
04b3bb054f
Changes: https://sourceforge.net/p/samtools/mailman/message/35033807/ PR: 209653 Submitted by: cartwright@asu.edu (maintainer)
49 lines
1.1 KiB
Makefile
49 lines
1.1 KiB
Makefile
# Created by: Reed A. Cartwright <cartwright@asu.edu>
|
|
# $FreeBSD$
|
|
|
|
PORTNAME= htslib
|
|
PORTVERSION= 1.3.1
|
|
CATEGORIES= biology devel
|
|
|
|
MAINTAINER= cartwright@asu.edu
|
|
COMMENT= C library for high-throughput sequencing data formats
|
|
|
|
LICENSE= BSD3CLAUSE MIT
|
|
LICENSE_COMB= multi
|
|
LICENSE_FILE= ${WRKSRC}/LICENSE
|
|
|
|
TEST_DEPENDS= bash:shells/bash
|
|
|
|
USE_GITHUB= yes
|
|
GH_ACCOUNT= samtools
|
|
|
|
USES= autoreconf gmake perl5 shebangfix
|
|
USE_PERL5= test
|
|
USE_LDCONFIG= yes
|
|
GNU_CONFIGURE= yes
|
|
SHEBANG_FILES= test/compare_sam.pl test/test.pl
|
|
|
|
OPTIONS_DEFINE= CURL
|
|
OPTIONS_DEFAULT= CURL
|
|
|
|
CURL_DESC= Use libcurl for network file access (HTTPS and S3 support).
|
|
CURL_LIB_DEPENDS= libcurl.so:ftp/curl
|
|
CURL_CONFIGURE_ENABLE= libcurl
|
|
|
|
CPPFLAGS+= -I${LOCALBASE}/include
|
|
LDFLAGS+= -L${LOCALBASE}/lib
|
|
|
|
MAKE_ENV= INSTALL_LIB="${INSTALL_LIB}" \
|
|
INSTALL_DATA="${INSTALL_DATA}" \
|
|
INSTALL_PROGRAM="${INSTALL_PROGRAM}" \
|
|
INSTALL_DIR="${MKDIR}"
|
|
|
|
PLIST_SUB= PORTVERSION="${PORTVERSION}"
|
|
|
|
TEST_TARGET= test
|
|
|
|
post-patch:
|
|
@${REINPLACE_CMD} -e 's|@PORTVERSION@|${PORTVERSION}|g' ${WRKSRC}/configure.ac
|
|
|
|
.include <bsd.port.mk>
|