mirror of
https://git.FreeBSD.org/ports.git
synced 2025-01-15 07:56:36 +00:00
302f405a84
Approved by: jrm (mentor) or wen (mentor) Differential Revision: https://reviews.freebsd.org/D13574
82 lines
1.8 KiB
Plaintext
82 lines
1.8 KiB
Plaintext
bin/alignGFA
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bin/bogart
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bin/bogus
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bin/canu
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bin/correctOverlaps
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bin/createFalconSenseInputs
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bin/erateEstimate
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bin/errorEstimate
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bin/estimate-mer-threshold
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bin/existDB
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bin/falcon_sense
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bin/fastqAnalyze
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bin/fastqSample
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bin/fastqSimulate
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bin/fastqSimulate-sort
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bin/filterCorrectionOverlaps
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bin/findErrors
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bin/findErrors-Dump
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bin/gatekeeperCreate
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bin/gatekeeperDumpFASTQ
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bin/gatekeeperDumpMetaData
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bin/gatekeeperPartition
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bin/generateCorrectionLayouts
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bin/leaff
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bin/maskMers
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bin/merTrim
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bin/meryl
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bin/mhapConvert
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bin/mmapConvert
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bin/ovStoreBucketizer
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bin/ovStoreBuild
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bin/ovStoreDump
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bin/ovStoreIndexer
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bin/ovStoreSorter
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bin/ovStoreStats
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bin/overlapConvert
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bin/overlapImport
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bin/overlapInCore
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bin/overlapInCorePartition
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bin/overlapPair
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bin/positionDB
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bin/prefixEditDistance-matchLimitGenerate
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bin/readConsensus
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bin/simple
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bin/splitReads
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bin/tgStoreCompress
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bin/tgStoreCoverageStat
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bin/tgStoreDump
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bin/tgStoreFilter
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bin/tgStoreLoad
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bin/tgTigDisplay
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bin/trimReads
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bin/utgcns
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lib/libcanu.a
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lib/libleaff.a
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%%SITE_PERL%%/canu/Configure.pm
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%%SITE_PERL%%/canu/Consensus.pm
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%%SITE_PERL%%/canu/CorrectReads.pm
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%%SITE_PERL%%/canu/Defaults.pm
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%%SITE_PERL%%/canu/ErrorEstimate.pm
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%%SITE_PERL%%/canu/Execution.pm
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%%SITE_PERL%%/canu/Gatekeeper.pm
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%%SITE_PERL%%/canu/Grid.pm
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%%SITE_PERL%%/canu/Grid_Cloud.pm
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%%SITE_PERL%%/canu/Grid_DNANexus.pm
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%%SITE_PERL%%/canu/Grid_LSF.pm
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%%SITE_PERL%%/canu/Grid_PBSTorque.pm
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%%SITE_PERL%%/canu/Grid_SGE.pm
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%%SITE_PERL%%/canu/Grid_Slurm.pm
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%%SITE_PERL%%/canu/HTML.pm
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%%SITE_PERL%%/canu/Meryl.pm
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%%SITE_PERL%%/canu/Output.pm
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%%SITE_PERL%%/canu/OverlapBasedTrimming.pm
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%%SITE_PERL%%/canu/OverlapErrorAdjustment.pm
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%%SITE_PERL%%/canu/OverlapInCore.pm
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%%SITE_PERL%%/canu/OverlapMMap.pm
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%%SITE_PERL%%/canu/OverlapMhap.pm
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%%SITE_PERL%%/canu/OverlapStore.pm
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%%SITE_PERL%%/canu/Report.pm
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%%SITE_PERL%%/canu/Unitig.pm
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%%JAVAJARDIR%%/mhap-2.1.2.jar
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