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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-30 01:15:52 +00:00
freebsd-ports/science
2022-09-06 09:06:06 -07:00
..
2d-rewriter science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
abinit science/abinit: Update 9.4.2 -> 9.6.2 2022-07-29 12:57:36 -07:00
afni science/afni: update to 22.2.10 2022-09-04 19:59:40 +02:00
agrum science/agrum: Update 1.1.1 -> 1.2.0 2022-07-29 01:08:49 -07:00
aircraft-datcom
ALPSCore */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
antioch math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
apbs
ascent science/ascent: Fix MPI, add MPI options NOMPI, MPICH, OPENMPI 2022-08-23 11:33:53 -07:00
atompaw science/atompaw: Update 4.2.0.0 -> 4.2.0.1 2022-06-13 20:26:14 -07:00
avogadro2 science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
avogadrolibs science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
axom science/axom: Update 0.6.1-1671 -> 0.7.0 2022-09-03 23:12:09 -07:00
bagel */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
bddsolve */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
berkeleygw science/berkeleygw: Improve BROKEN line 2022-07-19 19:27:06 -07:00
bodr science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
buddy science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
cantera */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
cardioid science/cardioid: New port: Cardiac simulation toolkit 2022-08-24 13:32:26 -07:00
cdcl science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
cdf science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
cdk science/cdk: Update 2.3 -> 2.7.1 2022-06-03 09:49:16 -07:00
cdo science/cdo: Update to 2.0.6 2022-08-31 19:40:52 +08:00
cgnslib science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
cgribex science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
checkmol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
chemical-mime-data science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
chemicalfun science/chemicalfun: Update g20220104 -> 0.1.3 2022-07-17 13:04:09 -07:00
chemps2 science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
chemtool science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
chemtool-devel science/chemtool-devel: Fix build on FreeBSD 13.1R and 14 2022-08-04 14:37:25 +01:00
chimes-calculator science/chimes-calculator: New port: Chebyshev Interaction Model for Efficient Simulation 2022-01-18 23:05:13 -08:00
ChipmunkPhysics science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
chrono */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
clhep science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
clipper
code_saturne science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
colt science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
conduit science/conduit: Update 0.8.3 -> 0.8.4 2022-08-28 15:27:46 -07:00
coordgenlibs */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
cp2k science/cp2k: Broken on systems where OpenMP isn't enabled 2022-07-24 19:05:43 -07:00
cp2k-data science/cp2k-data: Update 9.1.0 -> 2022.1 2022-07-11 21:10:07 -07:00
crf++ science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
csvtk all: Bump PORTREVISION after Go update 2022-08-03 16:35:13 -05:00
dakota */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
dalton
dcl science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
devisor science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
dftbplus textproc/toml-f: Update 0.2.3 -> 0.3.0 2022-08-03 10:30:41 -07:00
dftd4 science/dftd4: Update 3.3.0 -> 3.4.0 2022-04-30 12:48:30 -07:00
dimod science/dimod: Fix tests 2022-08-27 10:53:10 -07:00
dirac science/dirac: Broken on i386 2022-08-14 22:44:16 -07:00
dkh
dlib-cpp science/dlib-cpp: Update to 19.24 2022-08-10 19:06:40 +03:00
drawxtl
dvc
dwave-preprocessing science/dwave-preprocessing: New port: DWave: Preprocessing tools to aid in solving binary quadratic models 2022-08-27 19:35:08 -07:00
dynare */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
eccodes science/eccodes: Update to 2.27.0 2022-09-01 02:49:30 +08:00
elk science/elk: Update 8.4.30 -> 8.5.2 2022-09-06 00:08:19 -07:00
elmerfem science/elmerfem: Fix bug that build selected arbitrary Python versions 2022-07-21 10:20:30 -07:00
epte science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
erd
ergo Fix CONFLICTS entries of multiple ports 2022-01-10 16:15:39 +01:00
erkale */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
erkale-pseudopotentials science/erkale{,-pseudopotentials}: Update g20200426 -> g20220405 2022-05-24 12:51:17 -07:00
fastcap science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
fasthenry science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
fastjet */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
fisicalab math/gsl: bump portrevision of consumers after update to 2.7.1 2022-01-12 20:41:22 +01:00
fleur science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
frontistr science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
fsom
fvcom science/netcdf-fortran: Update to 4.5.4 2022-03-08 02:10:59 +08:00
fvcom-mpi
gabedit science/gabedit: Improve BROKEN lines and options 2022-07-20 12:21:45 -07:00
gamess-us
gbtolib science/gbtolib: Add FFLAGS=-fdefault-integer-8 2022-08-03 01:40:49 -07:00
gchemutils */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
gdma
getdp science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
ghemical science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
ghmm science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
gnudatalanguage science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
gpaw-setups
gramps science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
grib_api science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
gromacs science/gromacs: Update 2022.2 -> 2022.3; Add test target 2022-09-06 00:08:21 -07:00
gsmc science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
gtamsanalyzer science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
h5utils science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
h5z-zfp science/h5z-zfp: Update 1.0.1 -> 1.1.0 2022-08-20 09:37:39 -07:00
harminv science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
hdf science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
hdf5 science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
hdf5-18 science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
hdf5-110 science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
healpix astro/cfitsio: Update to 4.0.0 2022-02-28 23:06:56 +08:00
helfem */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
hepmc3 science/hepmc3: Update 3.2.4 -> 3.2.5 2022-05-12 11:57:53 -07:00
highfive science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
hypre science/hypre: Add comment 2022-08-21 23:01:47 -07:00
iboview */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
InsightToolkit science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
isaac-cfd science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
jdftx science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
jmol science/jmol: Unbreak by switching to Java 17 2022-08-25 11:12:33 -07:00
jstrack science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
kalzium science/kalzium: pet stage-qa 2022-09-05 22:06:44 +03:00
kim-api science/kim-api: Update 2.2.1 -> 2.3.0 2022-03-19 18:18:45 -07:00
kplib science/kplib: Remove -march=native to fix build on some architectures 2022-07-23 13:24:58 -07:00
kst2 science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
lammps science/lammps: Update 23Jun2022 -> 23Jun2022_update1 2022-08-06 22:46:36 -07:00
lamprop
latte math/dbcsr: Update 2.3.0 -> 2.4.1 2022-09-02 08:31:20 -07:00
libaec science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
libccp4
libcint science/libcint: Update 5.1.3 -> 5.1.6 2022-08-28 13:56:18 -07:00
libctl science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
libecpint science/libecpint: Update 1.0.6 -> 1.0.7 2021-12-14 14:41:53 -08:00
libefp
libgeodecomp */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
libgetar science/libgetar: New port: Library to read and write GEneric Trajectory ARchives 2022-06-27 10:58:02 -07:00
libghemical */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
libgridxc
libint science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
libint2 */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
libkml science/libkml: Revert 71a4cedd03 2022-09-04 23:24:42 +08:00
liblinear science/liblinear: Update to 2.45 2022-08-31 19:40:53 +08:00
libmbd science/libmbd: Update 0.12.4 -> 0.12.5 2022-08-03 10:30:42 -07:00
libmsym
libnegf science/libnegf: Update 1.0.3 -> 1.1.2 2022-05-18 13:51:37 -07:00
liboglappth science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
libquantum science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
libssm
libsvm science/libsvm: Update to 3.24 2022-08-20 18:31:42 -07:00
libsvm-python science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
libtensorflow1 science/libtensorflow1: mark BROKEN: tries to fetch during the build 2022-07-21 17:31:12 +03:00
libvdwxc
libxc science/libxc: Change to cmake; Install cmake files 2022-08-13 15:30:23 -07:00
liggghts science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
linux-zotero science/linux-zotero: Commit zotero.desktop patches & fix Exec 2022-07-29 15:21:06 +02:00
luscus
madness
maeparser */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
massxpert science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
mbdyn science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
mcstas
mcstas-comps science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
mctc-lib science/mctc-lib: Update 0.3.0 -> 0.3.1 2022-08-03 10:30:42 -07:00
mcxtrace */*: fix trailing whitespace in pkg-descr's 2022-04-01 18:09:49 +03:00
mcxtrace-comps
mdynamix */*: fix trailing whitespace in pkg-descr's 2022-04-01 18:09:49 +03:00
medit science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
meep science/meep: Fix build on i386 2022-07-27 01:31:14 -07:00
metaphysicl */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
minc2 science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
mmdb2 science/mmdb2: Update 2.0.20 -> 2.0.22 2022-04-30 09:03:26 -07:00
mmtf-cpp
mol2ps science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
molgif all: Bump PORTREVISION after Go update 2022-08-03 16:35:13 -05:00
molscript
molsketch */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
mopac science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
mpb science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
mpqc science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
msms
mstore */*: In 7 ports remove GNU-10.3.0 from install paths 2022-01-18 12:12:05 -08:00
multicharge science/multicharge: Update 0.1.2 -> 0.2.0 2022-05-05 23:21:10 -07:00
multiwfn
namd
nest */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
netcdf science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
netcdf-cxx science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
netcdf-fortran science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
nifticlib
nlcglib science/nlcglib: New port: Nonlinear CG methods for wave-function optimization in DFT 2022-08-26 17:11:44 -07:00
nwchem science/nwchem: Update 7.0.2.20211110 -> 7.0.2.20220224 2022-02-25 10:19:33 -08:00
nwchem-data
octopus science/octopus: Cosmetic changes 2022-05-31 02:12:09 -07:00
openbabel */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
openems */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
openkim-models science/openkim-models: Update 2021-01-28 -> 2021-08-11 2022-05-08 11:02:07 -07:00
openmc science/openmc: Update 0.13.0 -> 0.13.1 2022-08-20 10:30:28 -07:00
openmolcas science/openmolcas: Fix debug build 2022-08-20 10:48:45 -07:00
openmx
opensim-core
opensph */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
opsin science/opsin: Fix build on aarch64 2022-09-04 15:30:47 -07:00
orthanc */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
orthanc-dicomweb */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
orthanc-mysql */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
orthanc-postgresql */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
orthanc-webviewer */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
p5-Algorithm-SVMLight science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-3DBuilder science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Bond-Find science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Canonicalize science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Elements science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-MDLMol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-Mopac science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-PDB science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-SLN science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-SMARTS science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-SMILES science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-VRML science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-File-XYZ science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-FormulaPattern science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-InternalCoords science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Isotope science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-MacroMol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-MidasPattern science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Mok science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Mol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Pattern science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Reaction science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Chemistry-Ring science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Geo-BUFR science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Geo-Coordinates-Converter science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Geo-Coordinates-Converter-iArea science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Geo-WebService-Elevation-USGS science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Mcstas-Tools
p5-PerlMol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
p5-Physics-Unit science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
packmol
pagmo2 */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
paje science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
paraview */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
pastix science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
pcmsolver science/pcmsolver: Remove CMAKE_EXE_LINKER_FLAGS from cmake configure arguments 2022-07-17 13:48:20 -07:00
PETSc science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
phonopy science/phonopy: Update 2.15.0 -> 2.15.1 2022-05-28 21:52:24 -07:00
plumed science/plumed: Use upsteam release archive 2022-05-23 13:39:54 +02:00
pnetcdf science/pnetcdf: Remove outdated post-patch: 2022-08-27 18:23:40 +08:00
precice science/{,py-}pyprecice: Update 2.4.0.0 -> 2.5.0.0 2022-08-31 11:33:02 -07:00
pulseview */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-abipy */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-access science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-asap3 science/py-asap3: Fix python suffix in shared library name 2022-06-29 01:17:56 -07:00
py-asdf science/py-asdf: Update to 2.13.0 2022-08-31 19:41:12 +08:00
py-asdf-standard science/py-asdf-standard: Update to 1.0.3 2022-08-31 19:41:13 +08:00
py-asdf-transform-schemas science/py-asdf-transform-schemas: Update to 0.3.0 2022-08-31 19:41:13 +08:00
py-ase science/py-ase: Add test target 2022-06-19 03:01:29 -07:00
py-avogadrolibs science/py-avogadrolibs: Update 1.94.0 -> 1.95.1 2022-02-05 01:44:22 -08:00
py-cdo science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-chainer devel/protobuf: Update to 3.20.0 2022-04-16 12:19:07 +08:00
py-chainer-chemistry
py-chempy science/py-chempy: switch to USES=pytest, fix tests and document failing ones 2022-04-26 20:26:11 +03:00
py-cirq-aqt science/py-cirq-*: Add comments 2022-07-30 10:37:22 -07:00
py-cirq-core science/py-cirq-*: Add comments 2022-07-30 10:37:22 -07:00
py-cirq-google science/py-cirq-*: Add comments 2022-07-30 10:37:22 -07:00
py-cirq-ionq science/py-cirq-*: Add comments 2022-07-30 10:37:22 -07:00
py-cirq-pasqal science/py-cirq-*: Add comments 2022-07-30 10:37:22 -07:00
py-cirq-rigetti science/py-cirq-*: Add comments 2022-07-30 10:37:22 -07:00
py-coards science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-DendroPy science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-dimod science/py-dimod: Update 0.11.4 -> 0.11.5 2022-08-18 00:44:55 -07:00
py-dipy science/py-dipy: Update 1.4.1 -> 1.5.0 2022-04-24 12:42:21 -07:00
py-dlib */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-dwave-cloud-client science/py-dwave-cloud-client: Update 0.4.0 -> 0.10.1 2022-08-14 14:36:16 -07:00
py-dwave-greedy science/py-dwave-greedy: New port: DWave: Greedy binary quadratic model solvers 2022-08-14 14:36:18 -07:00
py-dwave-hybrid science/py-dwave-hybrid: New port: DWave: Hybrid asynchronous decomposition sampler prototype framework 2022-08-15 19:58:42 -07:00
py-dwave-inspector science/py-dwave-inspector: New port: DWave: Problem Inspector 2022-08-15 16:48:52 -07:00
py-dwave-neal science/py-dwave-*: Correct category 2022-08-14 11:37:55 -07:00
py-dwave-networkx science/py-dwave-*: Correct category 2022-08-14 11:37:55 -07:00
py-dwave-ocean-sdk science/py-dwave-ocean-sdk: New port: DWave: Meta-package for D-Wave's Ocean tools 2022-08-15 19:58:42 -07:00
py-dwave-preprocessing science/py-dwave-preprocessing: Fix conflict with other package 2022-08-14 14:36:17 -07:00
py-dwave-samplers science/py-dwave-samplers: Add tests 2022-08-23 11:33:53 -07:00
py-dwave-system science/py-dwave-system: New port: DWave: API for incorporating the D-Wave system as a sampler 2022-08-14 14:36:17 -07:00
py-dwave-tabu science/py-dwave-*: Correct category 2022-08-14 11:37:55 -07:00
py-dwavebinarycsp science/py-dwavebinarycsp: Remove unnecessary line and USE_PYTHON=cython 2022-08-15 19:58:41 -07:00
py-eccodes science/py-eccodes: Update to 1.5.0 2022-09-01 02:49:44 +08:00
py-esda science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-fresnel math/qhull: Renaming ports 2022-02-18 15:15:30 -06:00
py-geolinks science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-geomet science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-geometer science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-geometric
py-gpaw science/py-gpaw: Update 21.6.0 -> 22.1.0 2022-01-13 02:25:40 -08:00
py-GPy science/py-GPy: Broken on systems where OpenMP isn't enabled 2022-07-23 18:18:46 -07:00
py-GPyOpt
py-gsd science/py-gsd: Fix tests 2022-09-06 09:06:06 -07:00
py-h5json
py-h5py science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
py-hiphive science/py-hiphive: Update 1.0 -> 1.1 2022-05-07 10:11:29 -07:00
py-hoomd-blue science/py-hoomd-blue: Update 3.2.0 -> 3.4.0; Add MPI options 2022-09-04 11:30:55 -07:00
py-inequality science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-jupyter_jsmol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-kim-query science/py-kim-query: Update 1.1.0 -> 3.0.0 2022-05-08 11:02:07 -07:00
py-kinematics science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-kliff science/py-kliff: Update 0.3.3 -> 0.4.0 2022-04-29 12:40:02 -07:00
py-kpLib */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-liac-arff science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-libgetar science/py-libgetar: Fix tests 2022-06-27 15:39:42 -07:00
py-libpysal science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-lifelines
py-MDAnalysis science/py-MDAnalysis: Update 2.2.0 -> 2.3.0 2022-09-01 23:37:41 -07:00
py-MDAnalysisTests science/py-MDAnalysisTests: Update 2.2.0 -> 2.3.0 2022-09-01 23:37:41 -07:00
py-mdp science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-mmtf-python
py-molmod
py-moltemplate science/py-moltemplate: Update 2.20.5 -> 2.20.6 2022-07-01 15:41:38 -07:00
py-netCDF4 science/py-netCDF4: Update version 1.5.8=>1.6.0 2022-07-26 10:53:14 -05:00
py-netcdf-flattener science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-nibabel science/py-nibabel: Update 3.2.1 -> 3.2.2 2022-04-24 12:42:19 -07:00
py-nilearn science/py-nilearn: Add comment 2022-07-15 23:41:57 -07:00
py-obspy science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-oddt science/py-oddt: Not install tests 2022-03-25 10:28:34 -07:00
py-OpenFermion */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-OpenFermion-Dirac science/py-OpenFermion-Dirac: Update g20200831 -> g20220812 2022-08-12 01:12:13 -07:00
py-OpenFermion-PySCF science/py-OpenFermion-PySCF: New port: Interface between OpenFermion and PySCF 2022-08-11 17:11:19 -07:00
py-OpenMC science/py-OpenMC: Update 0.13.0 -> 0.13.1 2022-08-20 10:34:29 -07:00
py-openpiv
py-paida science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-paramz
py-penaltymodel science/py-penaltymodel: New port: DWave: Utilities and interfaces for using penalty models 2022-08-14 16:00:18 -07:00
py-phono3py
py-phonopy science/py-phonopy: Update 2.14.0 -> 2.15.1 2022-06-05 23:31:07 -07:00
py-PubChemPy
py-pupynere science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-py3Dmol science/py-py3Dmol: Update 1.8.0 -> 1.8.1 2022-08-11 13:04:34 -07:00
py-pyaixi science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-pyberny
py-pycsw science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-pydicom science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-PyFR science/py-PyFR: Update 1.13.0 -> 1.14.0 2022-05-05 23:21:10 -07:00
py-pygeodesy science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-pygeometa science/py-pygeometa: Update to 0.12.0 2022-09-01 02:49:44 +08:00
py-pygmo2 */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-pyked devel/py-pint: Update to 0.19.1 2022-04-18 07:58:18 +08:00
py-pymatgen science/py-pymatgen: Update 2022.4.26 -> 2022.7.19 2022-07-29 01:08:50 -07:00
py-pymbd science/py-pymbd: New port: Many-body dispersion library 2022-08-03 10:52:01 -07:00
py-pymol science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-PyNE science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
py-pyosf
py-pyprecice science/{,py-}pyprecice: Update 2.4.0.0 -> 2.5.0.0 2022-08-31 11:33:02 -07:00
py-pyqubo science/py-pyqubo: New port: DWave: Python DSL for constructing QUBOs from mathematical expressions 2022-08-15 14:12:19 -07:00
py-pysal science/py-pysal: Update to 2.7.0 2022-08-27 18:24:53 +08:00
py-pyscf science/py-pyscf: Update 2.0.1 -> 2.1.0 2022-09-03 23:12:08 -07:00
py-pyteomics science/py-pyteomics: Update to 4.5.5 2022-08-31 19:41:13 +08:00
py-qcelemental science/py-qcelemental: Update 0.24.0 -> 0.25.0 2022-06-15 13:56:03 -07:00
py-qcengine devel/py-pint: Update to 0.19.1 2022-04-18 07:58:18 +08:00
py-qiskit science/py-qiskit: Update 0.37.1-4 -> 0.37.2 2022-08-24 20:38:44 -07:00
py-qiskit-aer science/py-qiskit-aer: Update 0.10.0-72 -> 0.10.4 2022-08-11 00:46:53 -07:00
py-qiskit-experiments science/py-qiskit-experiments: Update 0.3.1 -> 0.4.0 2022-09-06 00:08:20 -07:00
py-qiskit-finance science/py-qiskit-finance: Update 0.3.3.20220816 -> 0.3.4 2022-09-01 23:37:41 -07:00
py-qiskit-ibm-experiment */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-qiskit-ibm-provider */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-qiskit-ibmq-provider */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-qiskit-nature science/py-qiskit-nature: Update 0.4.3 -> 0.4.4 2022-08-16 15:16:58 -07:00
py-qiskit-optimization */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-qiskit-terra science/py-qiskit-terra: Update 0.21.1 -> 0.21.2 2022-09-06 00:08:20 -07:00
py-qspin science/py-qspin: Fix build with setuptools 58.0.0+ 2022-03-25 21:38:19 +08:00
py-quantities science/py-quantities: Update 0.12.5 -> 0.13.0 2022-01-14 08:48:13 -08:00
py-rmf */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-rmsd
py-ruffus
py-scikit-fuzzy */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
py-scikit-learn science/py-scikit-learn: Add missing dependency joblib 2022-08-09 12:35:07 -07:00
py-scikit-optimize science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-scikit-sparse science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-scimath science/py-scimath: Update to 5.0.0 2022-08-29 23:59:57 +00:00
py-scipy science/py-scipy: Update to 1.9.0 2022-08-14 15:50:11 +08:00
py-scoria
py-segregation science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-segyio science/py-segyio: switch to USES=pytest and fix tests 2022-04-26 16:46:03 +03:00
py-SimpleSpectral
py-sklearn-pandas science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-skrebate science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-spaghetti science/py-spaghetti: Update to 1.6.6 2022-07-31 03:25:03 +08:00
py-spglib science/{,py-}spglib: Update 1.16.3 -> 1.16.5 2022-05-07 22:27:10 -07:00
py-tensorflow science/py-tensorflow: mark BROKEN 2022-07-21 23:49:19 +03:00
py-thewalrus science/py-thewalrus: New port: Open source library for hafnian calculation 2022-05-31 20:42:38 -07:00
py-tobler science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
py-trainstation science/py-trainstation: New port: Convenient training of linear models 2022-03-07 12:14:14 -08:00
py-tweedledum science/py-tweedledum: Correct BROKEN line 2022-08-12 00:33:46 -07:00
py-veusz science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
pybrain science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
pynn science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
q science/q: New port: Molecular Dynamics (MD) tools 2022-05-23 18:54:08 -07:00
qbox science/qbox: Update 1.74.3 -> 1.74.4 2022-07-20 15:00:05 -07:00
qcl science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
qiskit-aer science/qiskit-aer: Update 0.10.0-72 -> 0.10.4 2022-08-11 00:46:53 -07:00
qmcpack */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
quantum-espresso
quantum-espresso-pseudopotentials
quantum-jet science/quantum-jet: New port: Cross-platform header-only library for simulating quantum circuits 2022-05-31 13:02:18 -07:00
qwalk textproc/libxml2: bump all LIB_DEPENDS consumers 2022-04-10 15:11:41 -04:00
R-cran-AMORE science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-bayesm science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-cmprsk science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-DCluster science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-e1071 science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-eco science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-Epi science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-epicalc science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-etm science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-FAdist science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-fastICA science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-kernlab science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-ks science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-snow science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-som science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
R-cran-udunits2 science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rdkit */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
rmf */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
rubygem-ai4r science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-cdo science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-rgeo science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-rgeo-geojson science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-rgeo-proj4 science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-rgeo-shapefile science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-ruby-dcl science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
rubygem-ruby-netcdf science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
scidavis science/scidavis: tell portscout to ignore old tag 2022-05-10 21:31:45 +03:00
segyio devel/cmake: Update to 3.23.0 2022-05-16 08:49:43 +02:00
serac science/serac: New port: High order nonlinear thermomechanical simulation code 2022-09-05 01:15:51 -07:00
shelxle science/shelxle: Update 1.0.1406 -> 1.0.1418 2022-09-06 00:08:20 -07:00
siconos */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
siesta science/siesta: unbreak on powerpc* / main 2022-07-04 02:00:31 +02:00
sigrok-cli */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
sigrok-firmware science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
sigrok-firmware-fx2lafw science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
sigrok-firmware-utils science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
silo science/hdf5: bump PORTREVISION of consumers 2022-07-20 16:35:24 +02:00
simbody
simgrid */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
simint
simlib science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
simple-dftd3 textproc/toml-f: Update 0.2.3 -> 0.3.0 2022-08-03 10:30:41 -07:00
simsmith science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
sirius science/sirius: New port: Domain specific library for electronic structure calculations 2022-08-26 21:25:42 -07:00
smoldyn science/smoldyn: Update 2.67 -> 2.68 2022-07-31 01:12:49 -07:00
sparta science/sparta: Update 7Jan2022 -> 18Jul2022 2022-07-18 19:09:00 -07:00
spglib science/spglib: fix build without libomp 2022-05-31 03:05:56 +00:00
step science/step: pet stage-qa 2022-09-05 22:06:44 +03:00
svmlight science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
tblite textproc/toml-f: Update 0.2.3 -> 0.3.0 2022-08-03 10:30:41 -07:00
teem
tfel */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
tfel-edf */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
thermofun science/thermofun: Fix test target 2022-07-18 00:12:23 -07:00
tinker science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
trilinos */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
tweedledum science/tweedledum: New port: Library for analysis, compilation, synthesis of quantum circuits 2022-08-07 20:35:25 -07:00
udunits science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
ukrmol+ science/ukrmol+: Add FFLAGS=-fdefault-integer-8 to fix tests; Remove WITH_GSL 2022-08-03 01:40:50 -07:00
v_sim */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
vipster
vmd science: remove 'Created by' lines 2022-07-20 16:22:51 +02:00
voro++
votca */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden framework: Add new USES 'magick' for graphics/ImageMagick* 2021-12-11 14:50:53 +01:00
xdrawchem */*: bump all consumers after recent boost upgrade 2022-08-12 17:46:53 +03:00
xtb science/xtb: Broken on systems where OpenMP isn't enabled 2022-08-04 00:41:23 -07:00
yoda science/yoda: Update 1.9.4 -> 1.9.6 2022-07-31 01:12:48 -07:00
zotero science/zotero: Add missing distinfo for i386 2022-08-19 08:42:59 +02:00
Makefile science/serac: New port: High order nonlinear thermomechanical simulation code 2022-09-05 01:15:51 -07:00