..
2d-rewriter
*: Move manpages to share/man for imake ports.
2024-02-04 22:13:55 +03:00
abinit
science/abinit: update 9.10.3 → 9.10.5
2024-02-22 01:38:39 -08:00
afni
science/afni: update to 24.0.17
2024-03-25 18:53:42 +01:00
agrum
science/agrum: update 1.10.0 → 1.12.1
2024-02-19 12:55:25 -08:00
aircraft-datcom
ALPSCore
*/*: bump PORTREVISION after OpenMPI upgrade
2024-02-18 10:29:31 +01:00
antioch
apbs
arbor
ascent
atompaw
avogadro2
science/avogadro2: update 1.97.0 → 1.99.0
2024-02-12 15:07:36 -08:00
avogadrolibs
science/{,py-}avogadrolibs: update 1.97.0 → 1.99.0
2024-02-12 15:07:35 -08:00
axom
bagel
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
bddsolve
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
berkeleygw
science/berkeleygw: Broken on powerpc64le
2024-02-05 19:17:59 -08:00
bodr
bout++
bout++-merging-filaments
buddy
cantera
cardioid
cdf
cdk
*/*: properly depend on Maven package
2024-03-11 10:09:45 +01:00
cdo
*/*: Always use WRK_ENV with SETENVI
2024-03-23 18:45:45 +01:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemicalfun
chemps2
chemtool
science/chemtool: Move man pages to share/man
2024-03-21 12:34:32 +00:00
chemtool-devel
chimes-calculator
ChipmunkPhysics
chrono
cif-tools
clhep
clipper
code_saturne
science/code_saturne: upgrade to 8.1.1
2024-02-23 17:23:28 +01:00
colt
conduit
coordgenlibs
cp2k
cp2k-data
csvtk
lang/go: Change DEFAULT to 1.21
2024-03-24 15:29:00 +01:00
dakota
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
dalton
dd_package
devisor
dftbplus
dftd3
dftd4
dimod
dirac
dkh
dlib-cpp
drawxtl
dssp
dvc
dwave-preprocessing
dynare
eccodes
science/eccodes: Update to 2.34.1
2024-03-09 22:05:26 +08:00
elk
science/elk: update 9.2.12 → 9.4.2
2024-02-21 02:05:12 -08:00
elmerfem
science/elmerfem: support opencascade-7.8.0
2024-03-21 19:01:17 +01:00
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
feff10
fleur
frontistr
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gbtolib
gchemutils
science/gchemutils: Moved man to share/man
2024-02-25 13:54:37 +01:00
gcp
gdma
geant4
gemmi
science/{,py-}gemmi: update 0.6.4 → 0.6.5
2024-02-18 02:07:54 -08:00
getdp
science/getdp: Updat to 3.6.0.
2024-03-11 14:32:08 -05:00
ghemical
ghmm
gnudatalanguage
gpaw-setups
gramps
science/gramps: Update to 5.2.1
2024-03-25 13:37:36 +00:00
grib_api
gromacs
gsmc
science/gsmc: Moved man to share/man
2024-02-25 13:54:38 +01:00
gtamsanalyzer
h5utils
h5z-zfp
harminv
science/harminv: Moved man to share/man
2024-02-25 13:54:40 +01:00
hdf
hdf5
science/hdf5: Update WWW
2024-03-23 22:30:46 +08:00
hdf5-18
hdf5-110
healpix
helfem
hepmc3
highfive
science/highfive: update 2.8.0 → 2.9.0
2024-03-11 12:16:48 -07:00
hypre
science/hypre: update 2.30.0 → 2.31.0
2024-02-15 03:35:04 -08:00
iboview
InsightToolkit
InsightToolkit501
isaac-cfd
jdftx
jmol
jstrack
kalzium
KDE: Update KDE Gear to 23.08.5
2024-02-16 20:31:32 +01:00
kim-api
kplib
kst2
lammps
*/*: bump PORTREVISION after OpenMPI upgrade
2024-02-18 10:29:31 +01:00
lamprop
latte
*/*: bump PORTREVISION after OpenMPI upgrade
2024-02-18 10:29:31 +01:00
libaec
libccp4
libcifpp
libcint
science/libcint: update 6.1.0 → 6.1.2
2024-03-14 10:44:06 -07:00
libctl
libecpint
libefp
libgetar
libghemical
libgridxc
libint
libint2
science/libint2: update 2.8.2 → 2.9.0
2024-03-06 11:50:16 -08:00
libint2-psi4
libkml
liblinear
libmbd
libmsym
libnegf
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc
liggghts
linux-zotero
luscus
m-aneos
madness
maeparser
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
massxpert
mbdyn
science/mbdyn: Move man pages to share/man
2024-03-21 12:34:33 +00:00
mcpl
mcstas
mcstas-comps
mctc-lib
mcxtrace
science/mcxtrace: Moved man to share/man
2024-02-25 13:54:42 +01:00
mcxtrace-comps
mdynamix
medit
meep
mercantile
metaphysicl
minc2
science/minc2: Moved man to share/man
2024-02-25 13:54:43 +01:00
mmdb2
mmtf-cpp
mol2ps
molgif
lang/go: Change DEFAULT to 1.21
2024-03-24 15:29:00 +01:00
molscript
molsketch
mopac
mp2d
mpb
science/mpb: Move man pages to share/man
2024-03-21 12:34:33 +00:00
mpqc
science/mpqc: Move manpages to share/man
2024-03-25 21:41:04 +03:00
mrchem
mrcpp
msms
mstore
multicharge
multiwfn
mutationpp
namd
ncrystal
nest
netcdf
science/netcdf: Clean up pkg-descr
2024-03-23 22:30:46 +08:00
netcdf-cxx
science/netcdf-cxx: Remove unnecessary substitution
2024-03-23 22:30:46 +08:00
netcdf-fortran
science/netcdf-fortran: Clean up pkg-descr
2024-03-23 22:30:47 +08:00
nifticlib
nlcglib
nwchem
nwchem-data
ocean
*/*: bump PORTREVISION after OpenMPI upgrade
2024-02-18 10:29:31 +01:00
octopus
science/octopus: Move man pages to share/man
2024-03-21 17:10:16 +00:00
openbabel
openems
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
openkim-models
openmc
openmodelica
science/openmodelica: update 1.22.0 → 1.22.2
2024-02-22 01:38:41 -08:00
openmolcas
openmx
opensim-core
opensph
opsin
*/*: properly depend on Maven package
2024-03-11 10:09:45 +01:00
optench
science/optench: new port, a virtual optical bench
2024-02-16 17:37:24 +01:00
orthanc
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
orthanc-dicomweb
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
orthanc-mysql
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
orthanc-postgresql
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
orthanc-webviewer
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
p5-Algorithm-SVMLight
science/p5-Algorithm-SVMLight: Mark DEPRECATED
2024-03-14 12:30:00 +01:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
science/p5-Chemistry-Elements: update to 1.077
2024-02-11 20:03:13 +01:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2
paje
paraview
science/paraview: mark BROKEN on i386 untill a fix has been found.
2024-03-23 15:16:57 +01:00
pastix
pcmsolver
PETSc
science/PETSc: update 3.20.4 → 3.20.5
2024-03-11 09:20:36 -07:00
phonopy
science/{,py-}phonopy: update 2.21.2 → 2.22.0
2024-03-20 01:59:50 -07:00
plumed
pnetcdf
science/pnetcdf: Clean up Makefile
2024-03-23 22:30:47 +08:00
polytope
precice
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
psi4
science/psi4: Convert to USE_PYTHON=pytest
2024-03-09 23:21:39 +08:00
pulseview
py-abipy
py-access
py-arbor
py-arch
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-asap3
py-asdf
science/py-asdf: Update to 3.1.0
2024-03-23 22:49:29 +08:00
py-asdf-standard
science/py-asdf-standard: Update to 1.1.1
2024-03-23 22:49:29 +08:00
py-asdf-transform-schemas
science/py-asdf-transform-schemas: Update to 0.5.0
2024-03-23 22:49:30 +08:00
py-asdf-unit-schemas
science/py-asdf-unit-schemas: Update to 0.2.0
2024-03-23 22:49:30 +08:00
py-ase
py-atomium
py-avogadrolibs
science/{,py-}avogadrolibs: update 1.97.0 → 1.99.0
2024-02-12 15:07:35 -08:00
py-boutdata
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-boututils
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-cdo
py-cfgrib
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-cirq-rigetti
py-coards
py-DendroPy
py-dftbplus
py-dftd4
py-dimod
py-dipy
py-dlib
py-dwave-cloud-client
science/py-dwave-cloud-client: update 0.11.2 → 0.11.3
2024-03-04 15:19:09 -08:00
py-dwave-greedy
py-dwave-hybrid
science/py-dwave-hybrid: update 0.6.10 → 0.6.11
2024-03-04 15:19:09 -08:00
py-dwave-inspector
py-dwave-neal
py-dwave-networkx
py-dwave-ocean-sdk
science/py-dwave-ocean-sdk: update 6.8.0 → 6.9.0
2024-03-04 15:19:10 -08:00
py-dwave-preprocessing
py-dwave-samplers
py-dwave-system
py-dwave-tabu
py-dwavebinarycsp
py-earthpy
py-eccodes
science/py-eccodes: Update to 1.7.0
2024-03-09 22:06:14 +08:00
py-emmet-core
science/py-emmet-core: Add NO_ARCH
2024-03-10 03:10:04 +08:00
py-esda
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-fresnel
py-gemmi
science/{,py-}gemmi: update 0.6.4 → 0.6.5
2024-02-18 02:07:54 -08:00
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5json
py-h5py
science/py-h5py: Convert to USE_PYTHON=pep517
2024-03-23 22:49:30 +08:00
py-HepMC3
py-hiphive
py-hoomd-blue
science/py-hoomd-blue: update 4.4.1 → 4.6.0
2024-03-22 10:14:11 -07:00
py-inequality
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-ipygany
py-jupyter_jsmol
science/py-jupyter_jsmol: Convert to USE_PYTHON=pytest
2024-03-09 23:21:42 +08:00
py-kim-query
py-kimpy
py-kinematics
py-kliff
py-kpLib
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-liac-arff
py-libgetar
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-meshio
science/py-meshio: Convert to USE_PYTHON=pytest
2024-03-09 23:21:44 +08:00
py-mmcif
py-mmtf-python
py-molmod
py-moltemplate
science/py-moltemplate: update 2.20.20 → 2.20.21
2024-02-11 23:56:24 -08:00
py-mp-api
science/py-mp-api: Add NO_ARCH
2024-03-10 03:10:05 +08:00
py-mpcontribs-client
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-mrchem
py-ncrystal
py-netCDF4
py-netcdf-flattener
py-nglview
py-nibabel
py-nilearn
py-obspy
py-oddt
py-openbabel
py-OpenFermion
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC
py-openpiv
py-optking
py-paida
py-paramz
py-penaltymodel
py-phono3py
py-phonopy
science/{,py-}phonopy: update 2.21.2 → 2.22.0
2024-03-20 01:59:50 -07:00
py-PubChemPy
py-pupynere
py-py3Dmol
science/py-py3Dmol: update 2.0.3 → 2.1.0
2024-03-12 23:17:02 -07:00
py-pyaixi
py-pyberny
py-pycsw
py-pydicom
py-PyFR
py-pygeodesy
py-pygeometa
py-pygmo2
science/py-pygmo2: update 2.19.5 → 2.19.6
2024-02-22 01:38:41 -08:00
py-pyked
py-pymatgen
science/py-pymatgen: Convert to USE_PYTHON=pytest
2024-03-09 23:21:48 +08:00
py-pymatgen-analysis-alloys
py-pymbd
py-pymol
py-PyNE
py-pyosf
py-pyprecice
py-pyqubo
py-pysal
py-pyscf
science/py-pyscf: update 2.4.0 → 2.5.0
2024-02-06 09:33:31 -08:00
py-pyteomics
science/py-pyteomics: Convert to USE_PYTHON=pep517
2024-03-09 22:06:14 +08:00
py-qcelemental
py-qcengine
py-qiskit
py-qiskit-aer
py-qiskit-dynamics
py-qiskit-experiments
py-qiskit-finance
py-qiskit-ibm-experiment
py-qiskit-ibm-provider
py-qiskit-ibmq-provider
py-qiskit-nature
py-qiskit-optimization
py-qiskit-terra
lang/rust: Bump revisions after 1.77.0
2024-03-23 10:41:46 +01:00
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize
science/py-scikit-optimize: Update to 0.10.1
2024-03-23 22:49:30 +08:00
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-sdf
py-segregation
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-segyio
science/py-segyio: Convert to USE_PYTHON=pytest
2024-03-09 23:21:50 +08:00
py-signac
science/py-signac: update 2.1.0 → 2.2.0
2024-02-16 10:08:31 -08:00
py-SimpleSpectral
py-sklearn-pandas
py-skrebate
py-spaghetti
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-spglib
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-tensorflow
science/py-tensorflow: Mark BROKEN
2024-02-17 07:05:56 +01:00
py-thewalrus
py-tobler
py-trainstation
py-trx-python
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
py-tweedledum
science/py-tweedledum: Force GCC 12 when GCC is needed
2024-02-21 20:42:35 +00:00
py-vedo
py-veusz
py-xbout
devel/py-setuptools-scm: update to 8.0.4
2024-02-29 02:18:32 -05:00
pybrain
pynn
science/pynn: Update to 0.12.2
2024-02-23 12:05:11 +00:00
q
qbox
science/qbox: update 1_76_3 → 1_76_4
2024-03-22 05:22:54 -07:00
qcl
qiskit-aer
qmcpack
qt6-quick3dphysics
Qt6: Update to 6.6.2
2024-02-16 16:09:44 -05:00
quantum-espresso
science/quantum-espresso: update 6.7.0 → 7.3.1
2024-03-16 01:05:35 -07:00
quantum-espresso-pseudopotentials
science/quantum-espresso-pseudopotentials: update g20180406 → g20220916
2024-03-16 01:05:36 -07:00
quantum-jet
qwalk
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
science/R-cran-DCluster: Update to 0.2-10
2024-02-07 13:03:02 +00:00
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit
science/rdkit: Clang-17 crashes on FreeBSD 15 amd64
2024-03-17 01:21:51 -07:00
rmf
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-netcdf
salome-configuration
*/*: Replace format=bsdtar with format=ustar in tar archive operations
2024-02-18 17:48:08 -08:00
salome-kernel
*/*: Replace format=bsdtar with format=ustar in tar archive operations
2024-02-18 17:48:08 -08:00
scidavis
sciplot
segyio
serac
shelxle
science/shelxle: update 1.0.1615 → 1.0.1623
2024-03-15 08:46:27 -07:00
siconos
siesta
sigrok-cli
science/sigrok-cli: Moved man to share/man
2024-02-22 14:23:39 +01:00
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
simint
simlib
simple-dftd3
simsmith
sirius
smoldyn
science/smoldyn: update 2.72 → 2.73
2024-03-11 09:20:40 -07:00
sparta
*/*: bump PORTREVISION after OpenMPI upgrade
2024-02-18 10:29:31 +01:00
spglib
science/{,py-}spglib: update 2.3.0 → 2.3.1
2024-02-11 11:02:55 -08:00
spheral
step
*/*: Chase update of math/libqalculate
2024-03-28 17:16:58 -04:00
svmlight
science/svmlight: Mark DEPRECATED
2024-03-14 12:29:59 +01:00
tblite
teem
tfel
tfel-edf
thermofun
tinker
trilinos
science/trilinos: update 15-1-0 → 15-1-1
2024-03-28 10:28:22 -07:00
ttk
science/ttk: chase ParaView’s upgrade
2024-03-16 11:06:10 +01:00
tweedledum
udunits
ukrmol+
v_sim
science/v_sim: move man pages
2024-02-23 17:23:08 +01:00
vipster
vmd
voro++
science/voro++: Move man pages to share/man
2024-03-21 17:10:16 +00:00
votca
devel/boost: bump consumers after library update
2024-02-13 17:44:22 +03:00
wannier90
wwplot
wxmacmolplt
science/wxmacmolplt: Move man pages to share/man
2024-03-21 17:10:16 +00:00
xcfun
xcrysden
xdrawchem
xtb
yoda
zotero
science/zotero: Update to 6.0.36
2024-03-18 10:21:38 +01:00
zx
Makefile
science/optench: new port, a virtual optical bench
2024-02-16 17:37:24 +01:00
