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mirror of https://git.FreeBSD.org/ports.git synced 2024-11-20 00:21:35 +00:00
freebsd-ports/science
Wen Heping 5af16dbf50 cience/orthanci: Update to 1.9.7
PR:		259145
Reported by:	maintainer.freebsd@xpoundit.com(maintainer)
2021-10-17 15:18:34 +08:00
..
2d-rewriter
abinit
afni science/afni: update to 21.3.00 2021-10-11 18:20:11 +02:00
agrum
aircraft-datcom
ALPSCore
antioch
apbs
ascent
atompaw
avogadro2
avogadrolibs
axom
bagel
bddsolve
berkeleygw
bodr
buddy
cantera
cdcl
cdf
cdk
cdo
cgnslib
cgribex
checkmol
chemical-mime-data INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
chemps2
chemtool
chemtool-devel
chrono
clhep
clipper
code_saturne
colt
conduit
coordgenlibs
cp2k
cp2k-data
crf++
csvtk
dakota
dalton
dcl
devisor
dftbplus
dkh
dlib-cpp
drawxtl
dvc
dynare science/dynare: fix build on non-amd64 64-bit architectures 2021-10-08 01:25:19 +00:00
eccodes
elk
elmerfem
epte
erd
ergo
erkale
erkale-pseudopotentials
fastcap
fasthenry
fastjet
fisicalab
frontistr
fsom
fvcom
fvcom-mpi *: Clean up some things 2021-10-12 17:01:38 +02:00
gabedit INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
gamess-us
gchemutils INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
gdma
getdp
ghemical
ghmm
gnudatalanguage
gpaw-setups
gramps INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
grib_api
gromacs
gsmc
gtamsanalyzer
h5utils
h5z-zfp
harminv
hdf
hdf5 science/hdf5: Add CPE information 2021-10-14 12:26:24 +02:00
hdf5-18 science/hdf5-18: Add CPE information 2021-10-14 12:26:39 +02:00
healpix
helfem
hepmc3
highfive
hypre science/hypre: Update 2.22.1 -> 2.23.0 2021-10-07 11:43:15 -07:00
iboview
InsightToolkit
isaac-cfd
jdftx
jmol science/jmol: Update 14.31.53 -> 14.31.57 2021-10-06 09:11:50 -07:00
jstrack
kalzium KDE: Update KDE Gear to 21.08.2 2021-10-07 22:48:21 +02:00
kim-api
kst2
lammps science/lammps: Update patch_2Jul2021 -> stable_29Sep2021 2021-09-30 10:30:10 -07:00
lamprop
latte
libaec
libccp4
libcint science/libcint: Update 4.4.4 -> 4.4.6 2021-10-16 15:21:14 -07:00
libctl
libecpint
libefp
libgeodecomp
libghemical
libgridxc
libint
libint2
libkml
liblinear
libmsym
liboglappth *: fix tab vs. space issues, and comments according to the guide. 2021-10-16 11:51:39 +02:00
libquantum
libssm
libsvm *: Clean up some things 2021-10-12 17:01:38 +02:00
libsvm-python
libvdwxc
libxc
liggghts
luscus
madness
maeparser
massxpert
mbdyn
mcstas
mcstas-comps
mcxtrace
mcxtrace-comps
mdynamix
medit
metaphysicl
minc2
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch
mpb
mpqc
msms
multiwfn
namd
nest
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nwchem
nwchem-data
octopus
openbabel
openems science/openems: fix build on powerpc64* 2021-10-01 14:39:19 +00:00
openkim
openkim-models
openmc science/openmc: Unbreak LIBMESH option by switching to mpich 2021-10-12 13:52:17 -07:00
openmx
opensim-core
opensph devel/onetbb: Update to 2021.4.0 2021-10-10 17:11:27 +02:00
opsin
orthanc cience/orthanci: Update to 1.9.7 2021-10-17 15:18:34 +08:00
orthanc-dicomweb science/orthanc-dicomweb: Update to 1.7 2021-10-15 13:36:17 +01:00
orthanc-mysql science/orthanc-mysql: Update to 4.3 2021-10-15 10:48:25 +01:00
orthanc-postgresql
orthanc-webviewer
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 devel/onetbb: Update to 2021.4.0 2021-10-10 17:11:27 +02:00
paje
pcmsolver
PETSc
phonopy
plumed
pnetcdf
pulseview INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
py-abipy
py-access
py-asdf
py-ase
py-avogadrolibs
py-cdo
py-chainer
py-chainer-chemistry
py-chempy
py-cirq-aqt
py-cirq-core
py-cirq-google
py-cirq-ionq
py-cirq-pasqal
py-coards
py-DendroPy
py-dipy
py-dlib
py-eccodes
py-esda
py-geolinks
py-geomet
py-geometer
py-geometric
py-gpaw
py-GPy
py-GPyOpt
py-gsd science/py-gsd: Update 2.4.2 -> 2.5.0 2021-10-14 13:08:01 -07:00
py-h5json
py-h5py
py-hiphive
py-inequality
py-jupyter_jsmol
py-kim-query
py-kinematics
py-kliff
py-liac-arff
py-libpysal
py-lifelines
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mmtf-python
py-molmod
py-moltemplate
py-netCDF4 science/py-netCDF4: Update version 1.3.1=>1.5.7 2021-10-10 10:32:52 -05:00
py-netcdf-flattener
py-nibabel
py-nilearn
py-obspy
py-oddt
py-OpenFermion
py-OpenMC science/py-OpenMC: New port: Monte Carlo neutron and photon transport simulation code (Python) 2021-10-11 08:51:36 -07:00
py-openpiv
py-paida
py-paramz
py-phono3py
py-phonopy
py-PubChemPy
py-pupynere
py-pyaixi
py-pyberny science/py-pyberny: New port: Optimizer of molecular geometries with respect to the total energy 2021-10-16 16:56:19 -07:00
py-pycsw science/py-pycsw: Add CPE information 2021-10-14 23:30:52 +02:00
py-pydicom science/py-pydicom: Update to 2.2.2 2021-10-12 14:58:13 +08:00
py-PyFR
py-pygeodesy
py-pygeometa
py-pygmo2
py-pyked
py-pymatgen science/py-pymatgen: Update 2022.0.12 -> 2022.0.14 2021-10-16 16:56:17 -07:00
py-pymol
py-PyNE science/py-PyNE: Add the moab dependency; Install the nuc_data.h5 file; Build in parallel 2021-10-10 11:49:56 -07:00
py-pyosf
py-pysal
py-pyscf
py-pyteomics
py-qcelemental science/py-qcelemental: Update 0.22.0 -> 0.23.0; Add test target 2021-10-16 16:56:18 -07:00
py-qcengine science/py-qcengine: Update 0.19.0 -> 0.20.1; Add test target 2021-10-16 16:56:19 -07:00
py-qspin
py-quantities
py-rmf
py-rmsd
py-ruffus
py-scikit-fuzzy
py-scikit-learn
py-scikit-optimize
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-segregation
py-segyio
py-SimpleSpectral
py-skrebate
py-spaghetti
py-spglib
py-tensorflow science/py-tensorflow: Add CPE information 2021-10-14 12:27:47 +02:00
py-tobler
py-veusz
pybrain
pynn
qbox
qcl
qiskit-aer
qmcpack
quantum-espresso
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4 science/rubygem-rgeo-proj4: Update to 3.1.0 2021-10-14 03:17:26 +08:00
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis
segyio
shelxle science/shelxle: Update 1.0.1328 -> 1.0.1330 2021-10-16 16:56:16 -07:00
siconos cleanup: drop support for EOL FreeBSD 11.X 2021-09-30 23:23:30 +02:00
siesta
sigrok-cli INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simgrid
simint
simlib
simsmith
smoldyn
sparta
spglib
step KDE: Update KDE Gear to 21.08.2 2021-10-07 22:48:21 +02:00
svmlight
szip
teem
tfel
tfel-edf
thermofun
tinker science/tinker: Update 8.9.5 -> 8.10.1 2021-10-11 08:51:36 -07:00
udunits
v_sim INSTALLS_ICONS: retire the macro and rework the related dependencies 2021-10-10 21:44:42 +02:00
vipster
vmd
voro++
votca
wannier90
wwplot
wxmacmolplt
xcfun
xcrysden
xdrawchem
xtb
yoda
Makefile science/py-pyberny: New port: Optimizer of molecular geometries with respect to the total energy 2021-10-16 16:56:19 -07:00