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freebsd-ports/biology/p5-Bio-FeatureIO/Makefile
Sunpoet Po-Chuan Hsieh ef8d7d7d98 Add p5-Bio-FeatureIO 1.6.905
Bio::FeatureIO is an iterator subsystem for genomic sequence features.

Bio::FeatureIO is a handler module for the formats in the FeatureIO set (eg,
Bio::FeatureIO::GFF). It is the officially sanctioned way of getting at the
format objects, which most people should use.

The Bio::FeatureIO system can be thought of like biological file handles. They
are attached to filehandles with smart formatting rules (eg, GFF format, or BED
format) and can either read or write feature objects (Bio::SeqFeature objects,
or more correctly, Bio::FeatureHolderI implementing objects, of which
Bio::SeqFeature is one such object). If you want to know what to do with a
Bio::SeqFeatureI object, read Bio::SeqFeatureI.

The idea is that you request a stream object for a particular format. All the
stream objects have a notion of an internal file that is read from or written
to. A particular FeatureIO object instance is configured for either input or
output. A specific example of a stream object is the Bio::FeatureIO::gff object.

WWW: http://search.cpan.org/dist/Bio-FeatureIO/
2017-09-15 19:17:17 +00:00

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Makefile

# Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org>
# $FreeBSD$
PORTNAME= Bio-FeatureIO
PORTVERSION= 1.6.905
CATEGORIES= biology perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
MAINTAINER= sunpoet@FreeBSD.org
COMMENT= Handler for FeatureIO
LICENSE= ART10 GPLv1+
LICENSE_COMB= dual
LICENSE_FILE= ${WRKSRC}/LICENSE
BUILD_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl \
p5-Tree-DAG_Node>=0:devel/p5-Tree-DAG_Node \
p5-URI>=0:net/p5-URI \
p5-XML-DOM>=0:textproc/p5-XML-DOM \
p5-XML-DOM-XPath>=0:textproc/p5-XML-DOM-XPath
RUN_DEPENDS:= ${BUILD_DEPENDS}
NO_ARCH= yes
USE_PERL5= configure
USES= perl5
.include <bsd.port.mk>