Richard Gallamore 717c21d94b * Fix broken symlinks ... PR: 220081 Reported by: <metaf2xml@users.sourceforge.net> Reviewed by: lifanov (mentor) Approved by: lifanov (mentor) Differential Revision: https://reviews.freebsd.org/D11409		2017-06-29 19:22:05 +00:00
..
2d-rewriter
afni	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
avogadro	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
bddsolve	devel/boost-*: update to 1.64.0	2017-05-02 06:48:10 +00:00
bft
bodr	- Add LICENSE	2017-05-02 09:00:11 +00:00
brian
buddy
cdcl	Mark some ports failing on armv6, for errors classified as "linker_error".	2017-05-27 22:16:50 +00:00
cdf	Mark some ports failing on aarch64, and, in a few cases, other tier-2	2017-05-03 01:14:05 +00:00
cdo	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
cgnslib	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
cgribex	Add GRIB_API option	2017-02-12 08:20:20 +00:00
checkmol	- Bump PORTREVISION. Freepascal was updated	2017-02-26 17:48:32 +00:00
chemical-mime-data
chemtool	Remove libintl.so.9 compatibility link that was added in r374303 to	2016-12-08 19:52:19 +00:00
chemtool-devel	Remove libintl.so.9 compatibility link that was added in r374303 to	2016-12-08 19:52:19 +00:00
clhep	Mark some ports failing on power64. In cases where the error message	2017-05-13 23:36:16 +00:00
colt	The output of tools like awk, date, sort, tr,... depends on the current	2017-01-18 13:20:31 +00:00
crf++
dcl	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
devisor
dlpoly-classic	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
ecs	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
epte
fastcap
fasthenry
fisicalab	Update math/gsl to 2.3	2017-05-02 05:26:40 +00:00
fvcom	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
fvcom-mpi
fvm	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
gchemutils	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
getdp	- Update to 2.11.2.	2017-06-25 18:25:49 +00:00
ghemical	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
ghmm
gnudatalanguage	Update devel/readline to 7.0 patch 3	2017-06-27 13:46:53 +00:00
gramps	science/gramps: Update to 4.2.5	2016-12-19 12:52:40 +00:00
grib_api	Update to 1.22.0	2017-06-05 14:49:41 +00:00
gromacs	devel/boost-*: update to 1.64.0	2017-05-02 06:48:10 +00:00
gsmc	Remove libintl.so.9 compatibility link that was added in r374303 to	2016-12-08 19:52:19 +00:00
gtamsanalyzer
gwyddion	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
h5utils	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
harminv	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
hdf	Mark some ports failing on aarch64, and, in a few cases, other tier-2	2017-05-03 01:14:05 +00:00
hdf5	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
hdf5-18	Upgrade science/hdf5-18 to 1.8.19.	2017-06-17 09:48:47 +00:00
hs-bio
hypre	science/hypre: Fix build with openmpi	2017-06-08 19:37:02 +00:00
iboview	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
InsightToolkit	science/InsightToolkit: Update to 4.12.0	2017-06-20 01:20:02 +00:00
isaac-cfd	- Add LICENSE	2017-06-21 09:01:27 +00:00
jstrack	Remove libtiff.so.4 compatibility links that were added in r374303 to	2016-12-08 16:07:33 +00:00
kalzium	Chase ffmpeg 3.3 update (ABI changes)	2017-04-25 08:20:30 +00:00
kst2	Update math/gsl to 2.3	2017-05-02 05:26:40 +00:00
lamprop
libaec	Fix CONFLICTS_INSTALL	2017-05-27 19:42:13 +00:00
libctl	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
libgeodecomp	devel/boost-*: update to 1.64.0	2017-05-02 06:48:10 +00:00
libghemical	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
libint	Update the comment explaining the use of USE_GCC=yes to current	2017-05-14 20:18:04 +00:00
libkml	Mark some ports failing on power64. In cases where the error message	2017-05-22 22:29:17 +00:00
liblinear	* Updated to 2.11	2017-06-25 16:21:46 +00:00
liboglappth	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
libquantum
libsvm	* Updated to 3.22	2017-06-19 17:27:24 +00:00
libsvm-python
libxc	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
linsmith
massxpert	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
mbdyn	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
mcstas	Those ports build fine with bsd make	2016-12-11 08:25:56 +00:00
mcstas-comps	Those ports build fine with bsd make	2016-12-11 08:25:56 +00:00
medit	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
meep	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
mei
metaf2xml	* Fix broken symlinks	2017-06-29 19:22:05 +00:00
minc2	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
mol2ps	- Bump PORTREVISION. Freepascal was updated	2017-02-26 17:50:29 +00:00
mpb	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
mpqc	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
mpqc-mpich
ncs	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
netcdf	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
netcdf-cxx
netcdf-fortran	Remove CONFLICTS: science/netcdf-ftn and science/netcdf3-ftn have been removed over 3 years	2017-06-11 01:53:49 +00:00
nifticlib	Pass -fPIC when building the port's static libraries.	2016-12-28 14:54:37 +00:00
openbabel	science/openbabel: Update to 2.4.1	2017-05-24 01:43:00 +00:00
openkim	Mark some ports failing on armv6, for errors classified as "???",	2017-05-27 00:20:19 +00:00
orthanc	Fix build with SQLite 3.19.2	2017-06-06 13:51:35 +00:00
orthanc-dicomweb	devel/google{test,mock}: update to 1.8.0.50	2017-05-18 23:22:00 +00:00
orthanc-postgresql	devel/boost-*: update to 1.64.0	2017-05-02 06:48:10 +00:00
orthanc-webviewer	Mark BROKEN: fails to build	2017-06-08 19:33:40 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements	- Update to 1.071	2016-12-31 13:34:26 +00:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR	- Update to 1.36	2016-12-03 07:59:16 +00:00
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools	Those ports build fine with bsd make	2016-12-11 08:25:56 +00:00
p5-PerlMol
p5-Physics-Unit	Bump PORTREVISION for ports affected by the fix the last commit.	2017-01-31 16:21:45 +00:00
paje
paraview	Make ninja opt-out in cmake.mk	2017-06-25 21:07:58 +00:00
pnetcdf	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
psychopy	- Update to 1.85.1	2017-05-23 01:38:28 +00:00
pulseview	devel/boost-*: update to 1.64.0	2017-05-02 06:48:10 +00:00
py-cdo	Update to 1.3.3	2017-02-25 09:55:24 +00:00
py-coards
py-DendroPy	Update to 4.2.0	2017-03-29 21:16:07 +00:00
py-h5py	Update to 2.7.0	2017-06-03 18:03:40 +00:00
py-hcluster
py-mdp
py-mlpy	Update math/gsl to 2.3	2017-05-02 05:26:40 +00:00
py-netCDF4	Update science/hdf5 to 1.10.1	2017-05-30 02:56:43 +00:00
py-obspy	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
py-paida
py-pupynere
py-pyaixi
py-pydicom	Never set WRKSRC when using USE_GITHUB.	2017-01-03 18:12:13 +00:00
py-pysal	- Update to 1.13.0	2016-12-12 20:58:04 +00:00
py-pyteomics	Update to 3.4.1.	2017-02-22 01:45:24 +00:00
py-pyteomics.biolccc
py-scikit-fuzzy	Update to 0.3	2017-06-09 18:44:37 +00:00
py-scikit-learn	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
py-scikit-sparse	Bump PORTREVISIONs for ports depending on the canonical version of GCC and	2017-04-01 15:23:30 +00:00
py-scimath
py-scipy	- Fix build with gcc5	2017-05-05 14:42:02 +00:00
py-ws2300	- Update to 1.10	2016-12-29 01:39:00 +00:00
pybrain
pycdf	In several dozen ports, use single space for WWW: line in pkg-descr, and	2016-11-22 14:04:21 +00:00
pynn	- Update to 0.9.1	2017-05-23 02:34:02 +00:00
qcl	Update devel/readline to 7.0 patch 3	2017-06-27 13:46:53 +00:00
qtresistors
R-cran-AMORE	qa: add check for NO_ARCH	2017-06-18 18:09:16 +00:00
R-cran-bayesm	- Update to 3.1.0	2017-06-27 07:04:58 +00:00
R-cran-cmprsk	qa: add check for NO_ARCH	2017-06-18 18:09:16 +00:00
R-cran-DCluster	qa: add check for NO_ARCH	2017-06-18 18:09:16 +00:00
R-cran-e1071	- Update to 1.6-8	2017-05-07 07:46:15 +00:00
R-cran-eco	qa: add check for NO_ARCH	2017-06-18 18:09:16 +00:00
R-cran-Epi	- Update to 2.15	2017-06-06 08:12:50 +00:00
R-cran-epicalc
R-cran-etm	qa: add check for NO_ARCH	2017-06-18 18:09:16 +00:00
R-cran-snow
R-cran-som
R-cran-udunits2	- Add new port: science/R-cran-udunits2	2017-06-27 03:36:03 +00:00
rubygem-ai4r
rubygem-cdo	Update to 1.3.3	2017-02-25 09:55:29 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf	science/rubygem-ruby-netcdf: update to 0.7.2	2017-01-02 14:59:14 +00:00
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo	Update devel/readline to 7.0 patch 3	2017-06-27 13:46:53 +00:00
simlib	Sort NOT_FOR_ARCHS. While here, clean up some BROKEN usages.	2017-06-24 18:36:19 +00:00
simsmith
step	Update math/gsl to 2.3	2017-05-02 05:26:40 +00:00
svmlight	- With license framework, there's no longer need to shove license to docs, pkgmessage and restricted	2017-01-30 09:01:22 +00:00
szip	Fix CONFLICTS_INSTALL	2017-05-27 19:42:13 +00:00
tfel	Cleanup.	2017-05-04 20:30:48 +00:00
udunits	Update to 2.2.25	2017-05-20 21:50:06 +00:00
v_sim	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
veusz	Switch ports to use USE_PYQT=<foo> instead of using RUN_- and BUILD_DEPENDS	2017-02-04 13:37:15 +00:00
vmd	science/vmd: various fixes	2017-06-18 06:03:29 +00:00
voro++
xfce4-equake-plugin	- Update to 1.3.8.1	2017-03-05 08:09:35 +00:00
xmakemol	Revision bump of all ports with USE_GL after consolidation of mesa-libs	2017-05-23 05:03:14 +00:00
Makefile	- Add new port: science/R-cran-udunits2	2017-06-27 03:36:03 +00:00