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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-28 05:29:48 +00:00
freebsd-ports/science
2024-07-15 20:19:04 +01:00
..
2d-rewriter *: Move manpages to share/man for imake ports. 2024-02-04 22:13:55 +03:00
abinit science/abinit: update 10.0.3 → 10.0.5 2024-05-02 01:57:59 -07:00
afni science/afni: update to 24.1.22 2024-06-23 13:40:32 +02:00
agrum science/agrum: update 1.14.0 → 1.14.1 2024-07-10 19:20:42 -07:00
aircraft-datcom
ALPSCore */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
antioch
apbs
arbor
ascent */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
atompaw */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
avogadro2 science/avogadro2: update 1.97.0 → 1.99.0 2024-02-12 15:07:36 -08:00
avogadrolibs science/{,py-}avogadrolibs: update 1.97.0 → 1.99.0 2024-02-12 15:07:35 -08:00
axom */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
bagel */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
bddsolve devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
berkeleygw */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
bodr
bout++ */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
bout++-merging-filaments
buddy */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-01 23:11:47 +01:00
cantera */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
cardioid */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
cdf
cdk */*: properly depend on Maven package 2024-03-11 10:09:45 +01:00
cdo science/cdo: Update to 2.4.2 2024-07-07 00:02:01 +08:00
cgnslib
cgribex science/cgribex: Update to 2.0.0 2024-04-10 15:19:33 +08:00
checkmol */*: Bump PORTREVISION. lang/fpc was updated to 3.2.3 2024-06-16 03:26:36 -05:00
chemical-mime-data
chemicalfun */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
chemps2 */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
chemtool science/chemtool: Move man pages to share/man 2024-03-21 12:34:32 +00:00
chemtool-devel */*: Remove GNU_CONFIGURE_MANPREFIX after move man pages to share/man 2024-04-14 10:41:16 +01:00
chimes-calculator
ChipmunkPhysics
chrono */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
cif-tools science/cif-tools: update 1.0.9 → 1.0.11 2023-12-18 19:25:12 -08:00
clhep science/clhep: Update version 2.4.7.0=>2.4.7.1 2023-10-14 11:26:47 +02:00
clipper
code_saturne science/code_saturne: upgrade to 8.1.1 2024-02-23 17:23:28 +01:00
colt
conduit science/conduit: update 0.8.8 → 0.9.1 2024-04-05 02:15:39 -07:00
coordgenlibs
cp2k */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
cp2k-data
csvtk all: Bump after lang/go121 update 2024-07-03 08:29:54 +00:00
dakota devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
dalton */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
dd_package
devisor
dftbplus */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
dftd3
dftd4 */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
dimod science/{,py-}dimod: update 0.12.15 → 0.12.16 2024-07-10 19:20:43 -07:00
dirac science/dirac: Broken on i386 2024-04-27 00:53:00 -07:00
dkh
dlib-cpp
drawxtl
dssp
dvc devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
dwave-preprocessing science/dwave-preprocessing: update 0.6.3 → 0.6.5 2024-01-18 18:22:36 -08:00
dynare */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
eccodes science/eccodes: Update to 2.36.0 2024-07-07 00:02:03 +08:00
elk science/elk: update 9.6.8 → 10.0.1 2024-06-26 11:50:37 -07:00
elmerfem */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
epte MANPREFIX: eleminate its usage and move man to share/man 2024-01-09 11:32:17 +01:00
erd
ergo */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
erkale */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
erkale-pseudopotentials
fastcap science/fastcap: use malloc instead of sbrk 2023-12-08 23:29:38 +00:00
fasthenry science/fasthenry: use malloc instead of sbrk 2023-12-08 23:29:39 +00:00
fastjet
feff10
fleur */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
frontistr */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
fsom
fvcom
fvcom-mpi
gabedit */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
gamess-us
gbtolib */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
gchemutils science/gchemutils: Moved man to share/man 2024-02-25 13:54:37 +01:00
gcp
gdma
geant4 devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
gemmi science/{,py-}gemmi: update 0.6.5 → 0.6.6 2024-05-29 01:49:15 -07:00
getdp science/getdp: Updat to 3.6.0. 2024-03-11 14:32:08 -05:00
ghemical */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
ghmm */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
gnudatalanguage science/gnudatalanguage: upgrade to v1.0.6 2024-05-23 18:02:43 +02:00
gpaw-setups
gramps science/gramps: Update to 5.2.3 2024-07-15 20:19:04 +01:00
grib_api
gromacs science/gromacs: Minor correction 2024-05-27 15:52:35 -07:00
gsmc science/gsmc: Moved man to share/man 2024-02-25 13:54:38 +01:00
gtamsanalyzer
h5utils science/h5utils: Drop USES=autoreconf 2024-04-14 13:03:19 +01:00
h5z-zfp
harminv science/harminv: Moved man to share/man 2024-02-25 13:54:40 +01:00
hdf MAN[1-5]PREFIX: eleminate its usage and move man to share/man 2024-01-09 16:41:04 +01:00
hdf5 science/hdf5: Update WWW 2024-03-23 22:30:46 +08:00
hdf5-18 */*: Remove incorrect libtool dependency 2024-05-26 12:52:26 +02:00
hdf5-110 science/hdf5-110: Update to 1.10.11 2024-06-19 03:52:57 +08:00
healpix
helfem math/armadillo: Update to 14.0.0 2024-07-07 00:01:50 +08:00
hepmc3 science/hepmc3: update 3.2.7 → 3.3.0 2024-06-20 18:52:59 -07:00
highfive science/highfive: update 2.8.0 → 2.9.0 2024-03-11 12:16:48 -07:00
hypre science/hypre: don’t use internal BLAS but switch to OpenBLAS 2024-06-15 11:12:24 +02:00
iboview */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
InsightToolkit science/InsightToolkit: Fix build with CMake 3.29 2024-05-07 05:05:20 -04:00
InsightToolkit501 science/InsightToolkit501: Fix build om i386 2024-06-02 13:43:43 -07:00
isaac-cfd */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-01 23:11:47 +01:00
jdftx */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
jmol
jstrack
kalzium KDE: Update KDE Gear to 23.08.5 2024-02-16 20:31:32 +01:00
kim-api
kplib science/kplib: Fix build by removing -Werror promoting a warrning to an error 2024-04-11 01:17:15 -07:00
kst2 graphics/tiff: Update to 4.6.0 2024-04-27 14:44:59 +02:00
lammps */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
lamprop
latte */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
libaec science/libaec: Do not build testing unconditionally 2024-04-06 08:00:10 +08:00
libccp4
libcifpp
libcint */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
libctl science/libctl: Moved man to share/man 2024-01-29 23:25:58 +01:00
libecpint
libefp
libgetar science/{,py-}libgetar: update 1.1.3 → 1.1.5 2023-12-06 23:17:34 -08:00
libghemical */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
libgridxc */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
libint
libint2 science/libint2: update 2.8.2 → 2.9.0 2024-03-06 11:50:16 -08:00
libint2-psi4 science/libint2-psi4: Broken on i386 and armv7 2024-01-11 19:09:48 -08:00
libkml science/libkml: Fix linking with CMake >= 3.27 2023-11-08 00:36:35 -05:00
liblinear
libmbd */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
libmsym
libnegf */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
liboglappth
libquantum
libssm
libsvm
libsvm-python
libvdwxc
libxc science/libxc: update 6.0.0 → 6.2.2 2024-04-04 01:05:02 -07:00
liggghts graphics/tiff: Update to 4.6.0 2024-04-27 14:44:59 +02:00
linearelasticity science/linearelasticity: new port, Elas, a solver for linear elasticity 2024-06-23 14:58:40 +02:00
linux-zotero
luscus
m-aneos
madness */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
maeparser devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
massxpert */*: Drop maintainership for some of my ports 2024-01-27 09:23:07 +00:00
mbdyn */*: chase SuiteSparse’s upgrade 2024-04-29 22:08:56 +02:00
mcpl science/mcpl: New port: Monte Carlo Particle Lists library 2023-11-08 21:43:56 -08:00
mcstas
mcstas-comps
mctc-lib
mcxtrace science/mcxtrace: Moved man to share/man 2024-02-25 13:54:42 +01:00
mcxtrace-comps
mdynamix science/mdynamix: update 5.2.8 → 5.3.0 2023-12-14 12:34:17 -08:00
medit
meep */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
mercantile all: return bland@'s ports to the pool (+gnome) after safekeeping their commit bit. 2023-10-02 21:19:30 +02:00
metaphysicl
minc2 science/minc2: Moved man to share/man 2024-02-25 13:54:43 +01:00
mmdb2
mmg science/mmg: Improve port 2024-06-30 09:40:20 +02:00
mmtf-cpp
mol2ps */*: Bump PORTREVISION. lang/fpc was updated to 3.2.3 2024-06-16 03:26:36 -05:00
molgif all: Bump after lang/go121 update 2024-07-03 08:29:54 +00:00
molscript
molsketch
mopac */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
mp2d
mpb */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
mpqc science/mpqc: Move manpages to share/man 2024-03-25 21:41:04 +03:00
mrchem science/mrchem: update 1.1.3 → 1.1.4 2024-01-17 21:54:06 -08:00
mrcpp */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
msms MAN?PREFIX: eleminate its usage and move man to share/man 2024-01-10 16:29:49 +01:00
mstore science/mstore: update 0.2.0 → 0.3.0 2024-06-14 02:11:34 -07:00
multicharge */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
multiwfn */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
mutationpp science/mutationpp: New port: MUlticomponent Thermodynamic And Transport library for IONized gases 2023-11-05 22:33:14 -08:00
namd
ncrystal science/{,py-}ncrystal: update 3.7.1 → 3.8.0 2023-12-04 02:12:28 -08:00
nest science/nest: Broken on armv7 2024-05-26 14:57:09 -07:00
netcdf */*: Remove GNU_CONFIGURE_MANPREFIX=${PREFIX}/share after 9fd7ee1cdf 2024-04-13 21:03:19 +08:00
netcdf-cxx science/netcdf-cxx: Remove unnecessary substitution 2024-03-23 22:30:46 +08:00
netcdf-fortran science/netcdf-fortran: Update to 4.6.1 2024-04-18 20:48:10 +08:00
nifticlib science/nifticlib: Sanitize MANPREFIX 2024-01-22 02:32:48 +01:00
nlcglib */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
nwchem */*: clean up after swith to cmake:indirect 2024-04-11 12:27:00 +03:00
nwchem-data science/nwchem-data: update 7.2.0 → 7.2.2 2024-04-12 17:17:24 -07:00
ocean */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
octopus science/octopus: Attempt to fix build on i386 2024-07-09 03:08:39 -07:00
openbabel science/openbabel: Add perl build dependency 2023-11-04 09:57:02 -07:00
openems devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
openkim-models
openmc science/openmc: update 0.14.0 → 0.15.0 2024-06-22 00:22:24 -07:00
openmodelica science/openmodelica: update 1.23.0 → 1.23.1 2024-07-05 02:01:48 -07:00
openmolcas science/openmolcas: update 23.06 → 24.06 2024-06-16 09:56:31 -07:00
openmx science/openmx: update 3.8.5 → 3.9.9 2024-06-16 18:20:36 -07:00
opensim-core science/opensim-core: Use swig40 instead of swig 2024-07-14 04:19:04 +08:00
opensph devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
opsin */*: properly depend on Maven package 2024-03-11 10:09:45 +01:00
optench science/optench: new port, a virtual optical bench 2024-02-16 17:37:24 +01:00
orthanc science/orthanc: update 1.11.0 → 1.12.3 2024-05-05 23:12:53 -07:00
orthanc-dicomweb devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-mysql devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-postgresql devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
orthanc-webviewer devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements science/p5-Chemistry-Elements: update to 1.077 2024-02-11 20:03:13 +01:00
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Calc
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-Coordinates-Transform
p5-Geo-WebService-Elevation-USGS science/p5-Geo-WebService-Elevation-USGS: Update to 0.200 2024-07-07 00:11:39 +08:00
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
packmol
pagmo2 devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
paje
paraview devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
pastix */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
pcmsolver
PETSc science/PETSc: update 3.21.2 → 3.21.3 2024-07-12 23:46:13 -07:00
phonopy science/{,py-}phonopy: update 2.26.4 → 2.26.5 2024-07-15 00:53:52 -07:00
plumed */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
pnetcdf */*: Remove GNU_CONFIGURE_MANPREFIX=${PREFIX}/share after 9fd7ee1cdf 2024-04-13 21:03:19 +08:00
polytope
precice devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
psi4 */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
pulseview MANPREFIX: eleminate its usage and move man to share/man 2024-01-09 11:32:17 +01:00
py-abipy devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-access science/py-access: Convert to USE_PYTHON=pep517 2024-05-13 22:06:37 +08:00
py-arbor
py-arch devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-asap3 */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
py-asdf science/py-asdf: Update to 3.3.0 2024-07-14 04:17:52 +08:00
py-asdf-standard science/py-asdf-standard: Update to 1.1.1 2024-03-23 22:49:29 +08:00
py-asdf-transform-schemas science/py-asdf-transform-schemas: Update to 0.5.0 2024-03-23 22:49:30 +08:00
py-ase science/py-ase: update 3.22.1 → 3.23.0 2024-07-12 22:17:49 -07:00
py-atomium security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-avogadrolibs science/{,py-}avogadrolibs: update 1.97.0 → 1.99.0 2024-02-12 15:07:35 -08:00
py-boutdata devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-boututils devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-cdo science/py-cdo: Convert to USE_PYTHON=pep517 2024-05-13 22:06:39 +08:00
py-cfgrib science/py-cfgrib: Update to 0.9.13.0 2024-07-07 00:04:06 +08:00
py-chainer devel/protobuf: Update to 24.4 2023-12-15 01:03:10 +08:00
py-chainer-chemistry
py-chempy security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-cirq-aqt science/py-cirq-aqt: update 1.2.0 → 1.3.0 2023-12-03 16:37:08 -08:00
py-cirq-core science/py-cirq-core: update 1.2.0 → 1.3.0 2023-12-03 16:37:09 -08:00
py-cirq-google science/py-cirq-google: update 1.2.0 → 1.3.0 2023-12-03 16:37:10 -08:00
py-cirq-ionq science/py-cirq-ionq: update 1.2.0 → 1.3.0 2023-12-03 16:37:09 -08:00
py-cirq-pasqal science/py-cirq-pasqal: update 1.2.0 → 1.3.0 2023-12-03 16:37:08 -08:00
py-cirq-rigetti security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-coards science/py-coards: Convert to USE_PYTHON=pep517 2024-05-13 22:06:41 +08:00
py-DendroPy science/py-DendroPy: Update to 5.0.1 2024-06-03 07:29:16 +00:00
py-dftbplus science/{,py-}dftbplus: update 23.1 → 24.1 2024-05-28 01:12:11 -07:00
py-dftd4 science/{,py-}dftd4: update 3.5.0 → 3.6.0 2024-04-21 15:18:41 -07:00
py-dimod science/{,py-}dimod: update 0.12.15 → 0.12.16 2024-07-10 19:20:43 -07:00
py-dipy science/py-dipy: update 1.8.0 → 1.9.0 2024-04-22 01:25:11 -07:00
py-dlib */*: convert to cmake:indirect 2024-04-11 12:16:53 +03:00
py-dwave-cloud-client science/py-dwave-cloud-client: update 0.11.3 → 0.12.0 2024-07-14 20:00:20 -07:00
py-dwave-greedy
py-dwave-hybrid science/py-dwave-hybrid: update 0.6.10 → 0.6.11 2024-03-04 15:19:09 -08:00
py-dwave-inspector science/py-dwave-inspector: update 0.4.2 → 0.4.4 2024-01-18 19:29:19 -08:00
py-dwave-neal
py-dwave-networkx science/py-dwave-networkx: update 0.8.14 → 0.8.15 2024-06-15 02:12:44 -07:00
py-dwave-ocean-sdk science/py-dwave-ocean-sdk: update 6.8.0 → 6.9.0 2024-03-04 15:19:10 -08:00
py-dwave-optimization science/py-dwave-optimization: Add USE_PYTHON=pep517 2024-07-15 09:33:30 -07:00
py-dwave-preprocessing science/py-dwave-preprocessing: update 0.6.5 → 0.6.6 2024-07-14 20:00:19 -07:00
py-dwave-samplers science/py-dwave-samplers: update 1.2.0 → 1.3.0 2024-07-14 20:00:19 -07:00
py-dwave-system science/py-dwave-system: update 1.23.0 → 1.25.0 2024-07-15 00:19:27 -07:00
py-dwave-tabu
py-dwavebinarycsp science/py-dwavebinarycsp: update 0.2.0 → 0.3.0 2024-01-18 10:08:16 -08:00
py-earthpy
py-eccodes science/py-eccodes: Update to 1.7.1 2024-07-07 00:04:08 +08:00
py-emmet-core science/py-emmet-core: Add NO_ARCH 2024-03-10 03:10:04 +08:00
py-esda devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-fresnel devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
py-gemmi science/{,py-}gemmi: update 0.6.5 → 0.6.6 2024-05-29 01:49:15 -07:00
py-geolinks science/py-geolinks: Convert to USE_PYTHON=pep517 2024-05-13 22:06:44 +08:00
py-geomet science/py-geomet: Update to 1.1.0 2023-11-27 18:28:22 +08:00
py-geometer science/py-geometer: Convert to USE_PYTHON=pep517 2024-05-13 22:06:46 +08:00
py-geometric
py-gpaw */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
py-GPy science/py-GPy: update 1.10.0 → 1.13.1 2024-06-04 19:29:46 -07:00
py-GPyOpt
py-gsd
py-h5json
py-h5py science/py-h5py: Update to 3.11.0 2024-04-13 17:31:41 +08:00
py-h5pyd science/py-h5pyd: New port: h5py compatible client lib for HDF REST API 2024-04-07 11:37:59 -07:00
py-HepMC3 science/py-HepMC3: Broken on i386 2024-06-25 02:26:06 -07:00
py-hiphive
py-HofstadterTools */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
py-hoomd-blue devel/onetbb: Update to 2021.13.0 2024-07-04 13:39:44 +02:00
py-inequality devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-ipygany security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-jupyter_jsmol security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-kim-query
py-kimpy
py-kinematics science/py-kinematics: Convert to USE_PYTHON=pep517 2024-05-13 22:06:47 +08:00
py-kliff devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-kpLib devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-liac-arff science/py-liac-arff: Convert to USE_PYTHON=pep517 2024-05-13 22:06:49 +08:00
py-libgetar science/{,py-}libgetar: update 1.1.3 → 1.1.5 2023-12-06 23:17:34 -08:00
py-libpysal science/py-libpysal: Convert to USE_PYTHON=pep517 2024-07-03 23:34:37 +08:00
py-lifelines
py-MDAnalysis science/py-MDAnalysis{,Tests}: update 2.3.0 → 2.7.0 2024-05-06 14:06:15 -07:00
py-MDAnalysisTests science/py-MDAnalysis{,Tests}: update 2.3.0 → 2.7.0 2024-05-06 14:06:15 -07:00
py-mdp */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
py-meshio science/py-meshio: Fix build with removing setuptools from RUN_D 2024-06-25 13:28:26 +00:00
py-mmcif science/py-mmcif: update 0.83 → 0.84 2024-01-03 01:10:29 -08:00
py-mmtf-python
py-molmod
py-moltemplate science/py-moltemplate: update 2.20.20 → 2.20.21 2024-02-11 23:56:24 -08:00
py-mp-api science/py-mp-api: Add NO_ARCH 2024-03-10 03:10:05 +08:00
py-mpcontribs-client devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
py-mplhep science/py-mplhep: New port: Matplotlib styles for HEP 2024-06-23 03:54:13 -07:00
py-mplhep-data science/py-mplhep-data: New port: Font (Data) sub-package for mplhep 2024-06-23 03:54:13 -07:00
py-mrchem science/py-mrchem: update 1.1.3 → 1.1.4 2024-01-17 21:54:17 -08:00
py-ncrystal science/{,py-}ncrystal: update 3.7.1 → 3.8.0 2023-12-04 02:12:28 -08:00
py-netCDF4 science/py-netCDF4: Update version 1.6.4=>1.6.5 2023-10-26 14:22:06 +02:00
py-netcdf-flattener science/py-netcdf-flattener: Convert to USE_PYTHON=pep517 2024-05-13 22:06:50 +08:00
py-nglview science/py-nglview: update 3.0.7 → 3.1.2 2024-04-20 01:34:04 -07:00
py-nibabel science/py-nibabel: update 5.2.0 → 5.2.1 2024-04-14 12:07:37 -07:00
py-nilearn science/py-nilearn: update 0.10.1 → 0.10.3 2024-01-30 00:56:28 -08:00
py-obspy science/py-obspy: Update to 1.4.1 2024-05-06 08:53:04 +00:00
py-oddt
py-openbabel
py-OpenFermion science/py-OpenFermion: update 1.6.0 → 1.6.1 2024-04-27 00:52:59 -07:00
py-OpenFermion-Dirac
py-OpenFermion-PySCF
py-OpenMC science/py-OpenMC: update 0.14.0 → 0.15.0 2024-06-22 00:22:25 -07:00
py-openpiv
py-optking security/libsodium: update to 1.0.19, bump dependent ports 2024-05-20 10:33:03 +00:00
py-paida */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-01 23:11:47 +01:00
py-paramz
py-penaltymodel science/py-penaltymodel: update 1.0.2 → 1.1.0 2024-01-18 10:08:16 -08:00
py-periodictable science/py-periodictable: update 1.7.0 → 1.7.1 2024-07-09 02:12:11 -07:00
py-phono3py devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-phonopy science/{,py-}phonopy: update 2.26.4 → 2.26.5 2024-07-15 00:53:52 -07:00
py-PubChemPy
py-pupynere science/py-pupynere: Convert to USE_PYTHON=pep517 2024-05-13 22:06:52 +08:00
py-py3Dmol science/py-py3Dmol: update 2.0.3 → 2.1.0 2024-03-12 23:17:02 -07:00
py-pyaixi science/py-pyaixi: Convert to USE_PYTHON=pep517 2024-05-13 22:06:54 +08:00
py-pyberny
py-pycsw science/py-pycsw: Convert to USE_PYTHON=pep517 2024-05-13 22:06:55 +08:00
py-pydicom science/py-pydicom: Update to 2.4.4 2023-12-28 12:13:06 +00:00
py-PyFR
py-pygeodesy science/py-pygeodesy: Convert to USE_PYTHON=pep517 2024-05-13 22:06:57 +08:00
py-pygeometa devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-pygmo2 science/py-pygmo2: update 2.19.5 → 2.19.6 2024-02-22 01:38:41 -08:00
py-pyked devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-pymatgen science/py-pymatgen: Convert to USE_PYTHON=pytest 2024-03-09 23:21:48 +08:00
py-pymatgen-analysis-alloys
py-pymbd
py-pymol Revert "science/py-pymol: Mark DEPRECATED" 2023-10-29 16:37:06 -04:00
py-PyNE devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-pyosf
py-pyprecice
py-pyqubo
py-pysal science/py-pysal: Convert to USE_PYTHON=pep517 2024-05-13 22:07:01 +08:00
py-pyscf */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
py-pyteomics science/py-pyteomics: Update to 4.7.2 2024-05-20 01:15:51 +08:00
py-qcelemental science/py-qcelemental: update 0.27.1 → 0.28.0 2024-07-12 22:17:53 -07:00
py-qcengine devel/py-pyyaml: Move devel/py-yaml to devel/py-pyyaml 2024-07-07 16:05:33 +08:00
py-qspin
py-quantities science/py-quantities: update 0.14.1 → 0.15.0 2023-12-12 17:26:29 -08:00
py-rmf science/{,py-}rmf: update 1.6.0 → 1.6.1 2024-05-24 21:12:09 -07:00
py-rmsd
py-ruffus science/py-ruffus: Update to 2.8.4 2023-12-20 11:52:13 +01:00
py-scikit-fuzzy
py-scikit-learn science/py-scikit-learn: Update to 1.4.0 2024-01-19 00:25:37 +00:00
py-scikit-optimize science/py-scikit-optimize: Convert to USE_PYTHON=pep517 2024-05-13 22:07:02 +08:00
py-scikit-sparse */*: chase SuiteSparse’s upgrade 2024-04-29 22:08:56 +02:00
py-scimath
py-scipy */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
py-scoria
py-sdf
py-segregation science/py-segregation: Remove PY_SETUPTOOLS 2024-04-08 14:46:54 +08:00
py-segyio science/{,py-}segyio: update 1.9.11 → 1.9.12 2024-04-08 00:31:00 -07:00
py-signac science/py-signac: update 2.1.0 → 2.2.0 2024-02-16 10:08:31 -08:00
py-SimpleSpectral
py-sklearn-pandas science/py-sklearn-pandas: Convert to USE_PYTHON=pep517 2024-05-13 22:07:04 +08:00
py-skrebate science/py-skrebate: Convert to USE_PYTHON=pep517 2024-05-13 22:07:06 +08:00
py-spaghetti science/py-spaghetti: Remove PY_SETUPTOOLS 2024-04-08 14:46:56 +08:00
py-spglib science/{,py-}spglib: update 2.4.0 → 2.5.0 2024-07-12 02:01:04 -07:00
py-tensorflow science/py-tensorflow: Mark BROKEN 2024-02-17 07:05:56 +01:00
py-thewalrus science/py-thewalrus: update 0.20.0 → 0.21.0 2024-01-11 00:31:26 -08:00
py-tobler science/py-tobler: Add LICENSE_FILE 2024-05-16 14:22:09 +08:00
py-trainstation science/py-trainstation: update 1.0 → 1.1 2024-06-12 08:26:14 -07:00
py-trx-python science/py-trx-python: Fix build with removing setuptools from RUN_D 2024-06-24 22:17:01 +00:00
py-tweedledum science/py-tweedledum: update 1.1.1 → 1.1.1-20221123 2024-06-02 21:24:15 -07:00
py-vedo science/py-vedo: update 2023.5.0 → 2024.5.2 2024-06-24 12:58:30 -07:00
py-veusz
py-xbout devel/py-setuptools-scm: update to 8.0.4 2024-02-29 02:18:32 -05:00
pybrain
pynn science/pynn: Update to 0.12.3 2024-05-08 10:27:21 +00:00
q
qbox science/qbox: update 1_76_4 → 1_77_0 2024-07-12 22:17:48 -07:00
qcl
qiskit-aer */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
qmcpack */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
qt6-quick3dphysics Qt6: Update to 6.7.2 2024-06-20 18:44:32 -04:00
quantum-espresso */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
quantum-espresso-pseudopotentials science/quantum-espresso-pseudopotentials: update g20180406 → g20220916 2024-03-16 01:05:36 -07:00
quantum-jet */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
qwalk
R-cran-bayesm science/R-cran-bayesm: Update to 3.1.6 2023-09-28 09:21:18 +00:00
R-cran-cmprsk science/R-cran-cmprsk: Update to 2.2-12 2024-05-21 03:45:17 +00:00
R-cran-DCluster science/R-cran-DCluster: Update to 0.2-10 2024-02-07 13:03:02 +00:00
R-cran-e1071 science/R-cran-e1071: Update to 1.7-14 2023-12-09 17:31:19 +00:00
R-cran-eco
R-cran-Epi science/R-cran-Epi: Update to 2.52 2024-07-13 12:39:44 +00:00
R-cran-epicalc
R-cran-etm
R-cran-FAdist
R-cran-fastICA
R-cran-kernlab
R-cran-ks science/R-cran-ks: upgrade to 1.14.2 2024-01-16 21:47:12 +01:00
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit science/rdkit: Broken on 15 aarch64 2024-05-27 13:56:47 -07:00
rmf science/{,py-}rmf: update 1.6.0 → 1.6.1 2024-05-24 21:12:09 -07:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo science/rubygem-rgeo: Update to 3.0.1 2023-11-27 18:30:02 +08:00
rubygem-rgeo-geojson
rubygem-rgeo-proj4 graphics/proj: Update to 9.4.0 2024-04-15 06:44:23 +02:00
rubygem-rgeo-shapefile science/rubygem-rgeo-shapefile: Change RUN_DEPENDS from rubygem-dbf to rubygem-dbf4 2024-05-20 01:18:13 +08:00
rubygem-ruby-netcdf
salome-configuration */*: Replace format=bsdtar with format=ustar in tar archive operations 2024-02-18 17:48:08 -08:00
salome-kernel */*: Replace format=bsdtar with format=ustar in tar archive operations 2024-02-18 17:48:08 -08:00
scidavis */*: Add ${PY_SETUPTOOLS} to BUILD_DEPENDS 2024-06-29 01:02:34 -04:00
sciplot
segyio science/{,py-}segyio: update 1.9.11 → 1.9.12 2024-04-08 00:31:00 -07:00
serac */*: bump PORTREVISION after the upgrade of MPICH to 4.1.2 2023-12-10 11:23:11 +01:00
shelxle science/shelxle: update 1.0.1650 → 1.0.1652 2024-06-20 18:53:01 -07:00
siconos */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
siesta */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
sigrok-cli science/sigrok-cli: Moved man to share/man 2024-02-22 14:23:39 +01:00
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils MAN?PREFIX: eleminate its usage and move man to share/man 2024-01-10 16:29:49 +01:00
silo
simbody */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
simgrid devel/boost: bump consumers after library update 2024-02-13 17:44:22 +03:00
simint
simlib */*: Sunset 12.4-RELEASE/12-STABLE from ports tree 2023-12-31 01:37:05 +01:00
simple-dftd3 */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
simsmith
sirius */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
smoldyn graphics/tiff: Update to 4.6.0 2024-04-27 14:44:59 +02:00
sparta */*: bump PORTREVISION after OpenMPI upgrade 2024-02-18 10:29:31 +01:00
spglib science/{,py-}spglib: update 2.4.0 → 2.5.0 2024-07-12 02:01:04 -07:00
spheral science/spheral: update 2024.01.1 → 2024.06.1 2024-07-12 07:41:23 -07:00
step */*: Chase math/libqalculate shlib version bump 2024-05-15 16:49:00 -04:00
tblite */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
teem */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
tfel all: drop support for FreeBSD 13.2 which reached EOL today 2024-07-01 22:27:23 +02:00
tfel-edf */*: Update WWW to use HTTPS for sourceforge.net projects 2023-11-06 11:03:47 +01:00
thermofun science/thermofun: update 0.4.4 → 0.4.5 2024-04-27 00:52:59 -07:00
tinker science/tinker: Fix fetch: the release was re-rolled 2024-06-23 18:32:59 -07:00
trilinos */*: chase SuiteSparse’s upgrade 2024-04-29 22:08:56 +02:00
ttk science/ttk: Attempt to fix build by adding the searched depency package fast_float 2024-04-08 12:18:41 -07:00
tweedledum
udunits
ukrmol+ */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
v_sim science/v_sim: move man pages 2024-02-23 17:23:08 +01:00
vipster science/vipster: update 1.19.1b-14 → 1.19.1b-109 2023-12-29 19:44:45 -08:00
vmd
voro++ science/voro++: Move man pages to share/man 2024-03-21 17:10:16 +00:00
votca science/votca: update 2023 → 2024 2024-03-29 09:06:09 -07:00
wannier90 */*: chase the upgrade of BLAS / LAPACK to 3.12.0 2024-01-01 12:49:51 +01:00
wwplot science/wwplot: update 0.0.9 → 1.0.0 2024-04-19 12:28:22 -07:00
wxmacmolplt science/wxmacmolplt: Move man pages to share/man 2024-03-21 17:10:16 +00:00
xcfun
xcrysden
xdrawchem
xtb */*: bump PORTREVISION after the upgrade to OpenBLAS 2024-06-21 19:49:24 +02:00
yoda
zotero science/zotero: Fix for document indexing 2024-05-16 13:29:22 +02:00
zx
Makefile science/py-dwave-optimization: New port: DWave: Nonlinear models for industrial optimization problems 2024-07-15 00:19:26 -07:00