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mirror of https://git.FreeBSD.org/ports.git synced 2024-12-04 01:48:54 +00:00
freebsd-ports/science
Olivier Duchateau 3290ae0157 - Update to 1.3.8
- Sort USES
- Regenerate patch, to ensure is proper format
2015-08-19 04:38:46 +00:00
..
2d-rewriter
afni Convert to USES=jpeg 2015-06-22 18:33:20 +00:00
avogadro Add patch to fix the build with CMake 3.2. 2015-06-15 21:49:52 +00:00
bddsolve
bft
bodr
brian
buddy
cdcl
cdf Cleanup DIST* variables. 2015-05-11 18:34:57 +00:00
cdo - Convert to new options dependency helper 2015-08-19 01:38:20 +00:00
cgnslib - Update to 1.8.15 2015-05-24 08:10:28 +00:00
cgribex
checkmol - editors/lazarus update to 1.4.2 2015-08-09 08:06:43 +00:00
chemical-mime-data - Fix leftover files generated by shared-mime-info 2015-08-14 13:37:02 +00:00
chemtool
chemtool-devel
clhep science/clhep: Update version 2.2.0.6=>2.2.0.8 2015-06-17 08:34:24 +00:00
colt
crf++ MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
dcl
devisor
dlpoly-classic
ecs - Update to 1.8.15 2015-05-24 08:10:28 +00:00
epte
fastcap
fasthenry
fisicalab MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
fvcom
fvcom-mpi
fvm - Update to 1.8.15 2015-05-24 08:10:28 +00:00
gchemutils MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
getdp
ghemical Part 1 of adding USE_GNOME=intltool to ports that require it. 2015-08-02 20:23:55 +00:00
ghmm
gnudatalanguage - Update to 1.8.15 2015-05-24 08:10:28 +00:00
gramps Part 1 of adding USE_GNOME=intltool to ports that require it. 2015-08-02 20:23:55 +00:00
grib_api - Update to 1.13.1 2015-06-15 14:42:53 +00:00
gromacs - Update to 5.0.6 2015-08-16 21:31:41 +00:00
gsmc Reassign to hamradio@ 2015-08-18 20:37:35 +00:00
gtamsanalyzer - Strip binary 2015-06-18 19:48:35 +00:00
gwyddion - Update to 2.41 2015-06-30 20:25:55 +00:00
h5utils - Update to 1.8.15 2015-05-24 08:10:28 +00:00
harminv
hdf Convert to USES=jpeg 2015-06-22 18:33:20 +00:00
hdf5 - Use DISTVERSIONSUFFIX instead of DISTNAME 2015-06-13 11:11:52 +00:00
hdf-java Convert to USES=jpeg 2015-06-22 18:33:20 +00:00
hs-bio
InsightToolkit - Update to 4.7.2 2015-06-08 20:08:07 +00:00
isaac-cfd
jmol
jstrack
kalzium
kst2
lamprop
libctl
libghemical
libint
libkml - Cleanup GH_* knobs: 2015-05-13 18:59:21 +00:00
liblinear Cleanup DIST* variables. 2015-05-11 18:34:57 +00:00
liboglappth
libquantum
libsvm Cleanup DIST* variables. 2015-05-11 18:34:57 +00:00
libsvm-python
linsmith
massxpert
mbdyn
mcstas
mcstas-comps
medit
meep Fix build. Options helpers cannot be used here. 2015-08-03 17:55:15 +00:00
mei
metaf2xml science/metaf2xml update 1.56 -> 1.57 2015-07-14 21:00:53 +00:00
minc2 - Update to 1.8.15 2015-05-24 08:10:28 +00:00
mol2ps - editors/lazarus update to 1.4.2 2015-08-09 08:06:43 +00:00
mpb - Update to 1.8.15 2015-05-24 08:10:28 +00:00
mpqc - Fix shebangs 2015-06-11 09:27:05 +00:00
mpqc-mpich
ncs Upgrade ncs to 2.0.8 with its dependencies. 2015-05-14 17:31:29 +00:00
netcdf - Convert to new options helper 2015-08-19 01:39:50 +00:00
netcdf-cxx - Cleanup GH_* knobs: use DISTVERSIONPREFIX 2015-05-13 18:59:26 +00:00
netcdf-fortran - Cleanup GH_* knobs: 2015-05-13 18:59:31 +00:00
nifticlib
openbabel
openkim
orthanc Update to upstream version 0.9.3 2015-08-16 10:15:50 +00:00
orthanc-postgresql - Update to 1.2 2015-08-17 09:17:23 +00:00
orthanc-webviewer - Update to 1.2 2015-08-17 09:17:56 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES - Fix shebangs 2015-05-28 18:15:01 +00:00
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR After r390893, chmod u+w/u-w for stripping perl XS modules is unnecessary, 2015-06-29 15:47:44 +00:00
p5-Geo-Coordinates-Converter MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS - Update to 0.102 2015-07-01 17:46:12 +00:00
p5-PerlMol
p5-Physics-Unit
paje - Strip binaries 2015-06-18 19:49:14 +00:00
paraview Convert to USES=jpeg 2015-06-22 18:33:20 +00:00
pnetcdf - Update to 1.6.1 2015-06-02 18:38:28 +00:00
psychopy science/psychopy: update to 1.82.01 and overhaul 2015-04-29 13:53:09 +00:00
pulseview science/pulseview: disable Werror, add LICENSE_FILE 2015-08-18 20:02:40 +00:00
py-cdo - Update to 1.2.6 2015-06-05 18:57:17 +00:00
py-coards
py-DendroPy - Don't cat pkg-message from Makefiles 2015-05-27 00:15:04 +00:00
py-h5py - Update to 1.8.15 2015-05-24 08:10:28 +00:00
py-hcluster
py-mdp Remove UNIQUENAME and LATEST_LINK. 2015-08-17 14:20:40 +00:00
py-mlpy
py-netCDF4 - Update to 1.8.15 2015-05-24 08:10:28 +00:00
py-obspy - Fix shebangs 2015-06-05 21:10:33 +00:00
py-paida
py-pupynere
py-pyaixi
py-pydap - Mark BROKEN: does not build: 2015-08-10 20:00:30 +00:00
py-pydicom - Fix shebangs 2015-06-05 21:10:18 +00:00
py-pysal
py-scikit-learn MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
py-scikit-sparse - Fix build when using python 3.x 2015-07-26 15:11:39 +00:00
py-scimath
py-scipy
py-ws2300 - Add missing files to plist 2015-06-05 21:10:48 +00:00
pybrain Update ports in the s* categores to not use GH_COMMIT. 2015-05-07 17:41:23 +00:00
pycdf - Strip library 2015-06-03 16:51:58 +00:00
pynn
pyteomics
pyteomics.biolccc
qcl
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-DCluster - Update to 0.2-7 2015-06-13 05:45:48 +00:00
R-cran-e1071 - Update to 1.6-7 2015-08-08 07:13:44 +00:00
R-cran-eco
R-cran-Epi - Update to 1.1.67 2015-06-13 06:04:57 +00:00
R-cran-epicalc
R-cran-snow
R-cran-som
rubygem-ai4r Set NO_ARCH for remaining rubygem-* ports with no arch dependent files 2015-07-02 16:01:06 +00:00
rubygem-cdo - Remove RG link 2015-08-13 17:39:31 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf - Move science/rubygem-netcdf to science/rubygem-ruby-netcdf 2015-05-24 15:35:51 +00:00
sigrok-cli
sigrok-firmware Update ports in the s* categores to not use GH_COMMIT. 2015-05-07 17:41:23 +00:00
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo - Update to 1.8.15 2015-05-24 08:10:28 +00:00
simlib - Strip library 2015-05-17 14:43:37 +00:00
simsmith MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
step
svmlight
szip
udunits
v_sim Part 1 of adding USE_GNOME=intltool to ports that require it. 2015-08-02 20:23:55 +00:00
veusz
vmd
voro++
xfce4-equake-plugin - Update to 1.3.8 2015-08-19 04:38:46 +00:00
xmakemol
Makefile - Add science/orthanc-postgresql 2015-07-28 14:48:32 +00:00