| .. |
|
2d-rewriter
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
abinit
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
afni
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
agrum
|
science/agrum: Update 0.15.2 -> 0.16.3
|
2019-10-31 05:46:54 +00:00 |
|
aircraft-datcom
|
|
|
|
ALPSCore
|
|
|
|
antioch
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
apbs
|
|
|
|
atom
|
|
|
|
atompaw
|
|
|
|
avogadro2
|
|
|
|
avogadrolibs
|
|
|
|
bagel
|
|
|
|
bddsolve
|
|
|
|
berkeleygw
|
|
|
|
bodr
|
|
|
|
brian
|
|
|
|
buddy
|
|
|
|
cdcl
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
cdf
|
|
|
|
cdo
|
Update to 1.9.8
|
2019-11-13 23:25:29 +00:00 |
|
cgnslib
|
Add USES=xorg and USES=gl
|
2019-11-07 18:41:56 +00:00 |
|
cgribex
|
science/cgribex: Spell SZIP_CONFIGURE_OFF correctly
|
2019-10-20 08:46:09 +00:00 |
|
checkmol
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
chemical-mime-data
|
print, science: Add missing USES=gnome
|
2019-11-08 13:22:59 +00:00 |
|
chemps2
|
|
|
|
chemtool
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
chemtool-devel
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
chrono
|
|
|
|
clhep
|
|
|
|
clipper
|
|
|
|
code_saturne
|
Unbreak bulk -a with non default version of python3
|
2019-11-20 14:47:05 +00:00 |
|
colt
|
Clean up after java/openjdk6 and java/openjdk6-jre removal
|
2019-11-26 21:46:12 +00:00 |
|
coordgenlibs
|
|
|
|
coot
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
cp2k
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
cp2k-data
|
|
|
|
crf++
|
|
|
|
dalton
|
|
|
|
datawarrior
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
dcl
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
devisor
|
Clean up after java/openjdk6 and java/openjdk6-jre removal
|
2019-11-26 21:46:12 +00:00 |
|
dftbplus
|
|
|
|
dkh
|
|
|
|
dlib-cpp
|
Add USES=xorg and USES=gl
|
2019-11-07 18:41:56 +00:00 |
|
dlpoly-classic
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
drawxtl
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
dvc
|
|
|
|
eccodes
|
Update to 2.14.1
|
2019-11-04 15:58:47 +00:00 |
|
elk
|
|
|
|
epte
|
|
|
|
erd
|
|
|
|
erkale
|
science/erkale: Update g20190812 -> g20191120
|
2019-11-23 16:27:52 +00:00 |
|
erkale-pseudopotentials
|
|
|
|
esys-particle
|
|
|
|
fastcap
|
|
|
|
fasthenry
|
|
|
|
fisicalab
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
fleur
|
science/fleur: Spell HDF5_CMAKE_ON correctly
|
2019-10-06 08:37:06 +00:00 |
|
fsom
|
|
|
|
fvcom
|
|
|
|
fvcom-mpi
|
|
|
|
gabedit
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
gamess-us
|
|
|
|
gchemutils
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
gdma
|
|
|
|
getdp
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
ghemical
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
ghmm
|
print, science: Add missing USES=gnome
|
2019-11-08 13:22:59 +00:00 |
|
gnudatalanguage
|
There is a bug with GraphicsMagick: see
|
2019-11-23 18:05:22 +00:00 |
|
gpaw-setups
|
|
|
|
gramps
|
|
|
|
grib_api
|
|
|
|
gromacs
|
science/gromacs: Update 2019.3 -> 2019.4
|
2019-10-05 22:57:39 +00:00 |
|
gsmc
|
print, science: Add missing USES=gnome
|
2019-11-08 13:22:59 +00:00 |
|
gtamsanalyzer
|
|
|
|
gwyddion
|
print, science: Add missing USES=gnome
|
2019-11-08 13:22:59 +00:00 |
|
h5utils
|
|
|
|
h5z-zfp
|
|
|
|
harminv
|
|
|
|
hdf
|
|
|
|
hdf5
|
Add PARALLEL option
|
2019-09-30 11:32:04 +00:00 |
|
hdf5-18
|
|
|
|
healpix
|
|
|
|
highfive
|
science/highfive: Update 2.1 -> 2.1.1
|
2019-11-10 16:16:55 +00:00 |
|
hypre
|
|
|
|
iboview
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
InsightToolkit
|
- Update devel/gdcm to 3.0.4.
|
2019-10-19 23:45:10 +00:00 |
|
isaac-cfd
|
|
|
|
jdftx
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
jmol
|
science/jmol: Update 14.29.55 -> 14.30.0
|
2019-11-30 23:24:35 +00:00 |
|
jstrack
|
Update to version 3.4.0, which includes updated documentation, links to
|
2019-10-02 16:14:46 +00:00 |
|
kalzium
|
KDE Applications: update to 19.08.3
|
2019-11-09 08:13:40 +00:00 |
|
kim-api
|
|
|
|
kst2
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
lammps
|
science/lammps: fix build on GCC architectures
|
2019-11-28 14:20:18 +00:00 |
|
lamprop
|
|
|
|
latte
|
|
|
|
libaec
|
|
|
|
libccp4
|
|
|
|
libcint
|
|
|
|
libctl
|
|
|
|
libefp
|
|
|
|
libgeodecomp
|
|
|
|
libghemical
|
Pet portlint (trailing whitespace).
|
2019-11-08 03:23:25 +00:00 |
|
libgridxc
|
|
|
|
libint
|
|
|
|
libint2
|
|
|
|
libkml
|
devel/google{test,mock}: update to 1.10.0
|
2019-10-05 00:42:20 +00:00 |
|
liblinear
|
|
|
|
libmsym
|
|
|
|
liboglappth
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
libquantum
|
|
|
|
libssm
|
|
|
|
libsvm
|
|
|
|
libsvm-python
|
|
|
|
libvdwxc
|
|
|
|
libxc
|
|
|
|
liggghts
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
lm
|
|
|
|
luscus
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
madness
|
|
|
|
maeparser
|
science/maeparser: Update 1.2.1 -> 1.2.2
|
2019-10-13 15:15:08 +00:00 |
|
massxpert
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
mbdyn
|
|
|
|
mcstas
|
|
|
|
mcstas-comps
|
|
|
|
mcxtrace
|
|
|
|
mcxtrace-comps
|
|
|
|
mdynamix
|
|
|
|
medit
|
Unbreak medit.
|
2019-11-20 20:40:53 +00:00 |
|
meep
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
metaphysicl
|
science/metaphysicl: 0.5.2 -> 0.6.0
|
2019-10-13 21:17:17 +00:00 |
|
minc2
|
|
|
|
mmdb2
|
|
|
|
mmtf-cpp
|
|
|
|
mol2ps
|
|
|
|
molgif
|
Bump PORTREVISION after r517743 to force relinking.
|
2019-11-16 12:52:39 +00:00 |
|
molscript
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
molsketch
|
|
|
|
mpb
|
|
|
|
mpqc
|
Unmark these ports broken on aarch64.
|
2019-11-08 03:54:11 +00:00 |
|
msms
|
|
|
|
multiwfn
|
|
|
|
namd
|
|
|
|
ncnn
|
science/ncnn: Update 20190908 -> 20191113
|
2019-11-16 09:22:44 +00:00 |
|
nest
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
netcdf
|
Update to 4.7.3
|
2019-12-08 16:52:27 +00:00 |
|
netcdf-cxx
|
|
|
|
netcdf-fortran
|
Update to 4.5.2
|
2019-09-26 18:13:09 +00:00 |
|
nifticlib
|
|
|
|
nwchem
|
science/nwchem: Update 6.8.1.20190820 -> 7.0.0-beta1
|
2019-11-23 17:44:06 +00:00 |
|
nwchem-data
|
|
|
|
octopus
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
openbabel
|
|
|
|
openkim
|
|
|
|
openkim-models
|
|
|
|
openmx
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
opensim-core
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
opensph
|
|
|
|
opsin
|
|
|
|
p5-Algorithm-SVMLight
|
|
|
|
p5-Chemistry-3DBuilder
|
|
|
|
p5-Chemistry-Bond-Find
|
|
|
|
p5-Chemistry-Canonicalize
|
|
|
|
p5-Chemistry-Elements
|
|
|
|
p5-Chemistry-File-MDLMol
|
|
|
|
p5-Chemistry-File-Mopac
|
|
|
|
p5-Chemistry-File-PDB
|
|
|
|
p5-Chemistry-File-SLN
|
|
|
|
p5-Chemistry-File-SMARTS
|
|
|
|
p5-Chemistry-File-SMILES
|
|
|
|
p5-Chemistry-File-VRML
|
|
|
|
p5-Chemistry-File-XYZ
|
|
|
|
p5-Chemistry-FormulaPattern
|
|
|
|
p5-Chemistry-InternalCoords
|
|
|
|
p5-Chemistry-Isotope
|
|
|
|
p5-Chemistry-MacroMol
|
|
|
|
p5-Chemistry-MidasPattern
|
|
|
|
p5-Chemistry-Mok
|
|
|
|
p5-Chemistry-Mol
|
|
|
|
p5-Chemistry-Pattern
|
|
|
|
p5-Chemistry-Reaction
|
|
|
|
p5-Chemistry-Ring
|
|
|
|
p5-Geo-BUFR
|
|
|
|
p5-Geo-Coordinates-Converter
|
|
|
|
p5-Geo-Coordinates-Converter-iArea
|
|
|
|
p5-Geo-ReadGRIB
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
p5-Geo-WebService-Elevation-USGS
|
Update to 0.116
|
2019-10-28 14:57:46 +00:00 |
|
p5-Mcstas-Tools
|
|
|
|
p5-PerlMol
|
|
|
|
p5-Physics-Unit
|
|
|
|
packmol
|
|
|
|
pagmo2
|
science/pagmo2: Update 2.10-161 -> 2.11.4
|
2019-12-08 01:52:29 +00:00 |
|
paje
|
|
|
|
paraview
|
Unbreak
|
2019-11-07 17:28:56 +00:00 |
|
pcmsolver
|
science/pcmsolver: fix build on GCC architectures
|
2019-10-27 19:19:07 +00:00 |
|
PETSc
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
pnetcdf
|
|
|
|
psychopy
|
|
|
|
pulseview
|
|
|
|
py-abipy
|
|
|
|
py-asdf
|
Change RUN_DEPENDS from py-semantic_version to py-semantic_version26
|
2019-09-26 18:16:28 +00:00 |
|
py-ase
|
|
|
|
py-avogadrolibs
|
|
|
|
py-cdo
|
|
|
|
py-chainer
|
science/py-chainer: Update 6.5.0 -> 7.0.0
|
2019-12-06 05:52:06 +00:00 |
|
py-chainer-chemistry
|
science/py-chainer-chemistry: Update 0.5.0 -> 0.6.0
|
2019-10-06 17:48:09 +00:00 |
|
py-chempy
|
science/py-chempy: Update 0.7.8 -> 0.7.9
|
2019-10-12 15:55:43 +00:00 |
|
py-coards
|
|
|
|
py-DendroPy
|
|
|
|
py-dlib
|
Add USES=xorg and USES=gl
|
2019-11-07 18:41:56 +00:00 |
|
py-eccodes-python
|
Update to 0.9.3
|
2019-10-20 17:12:09 +00:00 |
|
py-geometer
|
|
|
|
py-gpaw
|
|
|
|
py-GPy
|
science/py-GPy: Update 1.9.8 -> 1.9.9
|
2019-10-20 00:41:22 +00:00 |
|
py-GPyOpt
|
|
|
|
py-gsd
|
science/py-gsd: Update 1.8.1 -> 1.9.3
|
2019-10-12 16:47:23 +00:00 |
|
py-h5py
|
|
|
|
py-hcluster
|
|
|
|
py-kinematics
|
|
|
|
py-lifelines
|
|
|
|
py-MDAnalysis
|
|
|
|
py-MDAnalysisTests
|
|
|
|
py-mdp
|
|
|
|
py-mlpy
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
py-mmtf-python
|
|
|
|
py-molmod
|
science/py-molmod: Update 1.4.4 -> 1.4.5
|
2019-10-12 16:44:38 +00:00 |
|
py-netCDF4
|
|
|
|
py-obspy
|
|
|
|
py-oddt
|
|
|
|
py-OpenFermion
|
|
|
|
py-openpiv
|
|
|
|
py-paida
|
|
|
|
py-paramz
|
|
|
|
py-phono3py
|
|
|
|
py-phonopy
|
|
|
|
py-pupynere
|
|
|
|
py-pyaixi
|
|
|
|
py-pydicom
|
|
|
|
py-PyFR
|
|
|
|
py-pygeodesy
|
|
|
|
py-pymatgen
|
|
|
|
py-pymol
|
|
|
|
py-pyosf
|
|
|
|
py-PyQuante
|
Unmark these ports broken on aarch64.
|
2019-11-08 03:54:11 +00:00 |
|
py-pysal
|
|
|
|
py-pyteomics
|
|
|
|
py-pyteomics.biolccc
|
|
|
|
py-qcelemental
|
science/py-qcelemental: Update 0.9.0 -> 0.11.0
|
2019-10-29 03:42:56 +00:00 |
|
py-qcengine
|
|
|
|
py-qspin
|
|
|
|
py-quantities
|
|
|
|
py-rmf
|
|
|
|
py-rmsd
|
|
|
|
py-ruffus
|
|
|
|
py-ScientificPython
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
py-scikit-fuzzy
|
science/py-scikit-fuzzy: Update 0.4.1 -> 0.4.2
|
2019-11-16 09:42:27 +00:00 |
|
py-scikit-learn
|
Release.
|
2019-11-11 12:00:44 +00:00 |
|
py-scikit-sparse
|
|
|
|
py-scimath
|
|
|
|
py-scipy
|
|
|
|
py-scoria
|
|
|
|
py-SimpleSpectral
|
|
|
|
py-spglib
|
|
|
|
py-tensorflow
|
Unbreak bulk -a with non default versions of python3
|
2019-11-20 14:42:36 +00:00 |
|
py-tensorflow-estimator
|
Mark BROKEN: fails to build
|
2019-11-20 14:00:42 +00:00 |
|
py-veusz
|
science/py-veusz: Update 3.0.1 -> 3.1
|
2019-10-29 03:36:12 +00:00 |
|
py-ws2300
|
|
|
|
pybrain
|
|
|
|
pycdf
|
|
|
|
pynn
|
|
|
|
qbox
|
|
|
|
qcl
|
|
|
|
qmcpack
|
|
|
|
quantum-espresso
|
|
|
|
quantum-espresso-pseudopotentials
|
|
|
|
qwalk
|
|
|
|
R-cran-AMORE
|
|
|
|
R-cran-bayesm
|
- Update to 3.1.4
|
2019-11-29 23:26:04 +00:00 |
|
R-cran-cmprsk
|
- Update to 2.2-9
|
2019-10-11 09:12:52 +00:00 |
|
R-cran-DCluster
|
|
|
|
R-cran-e1071
|
- Update to 1.7-3
|
2019-11-28 14:43:13 +00:00 |
|
R-cran-eco
|
|
|
|
R-cran-Epi
|
- Update to 2.40
|
2019-11-28 00:12:45 +00:00 |
|
R-cran-epicalc
|
|
|
|
R-cran-etm
|
|
|
|
R-cran-fastICA
|
|
|
|
R-cran-kernlab
|
- Update to 0.9-29
|
2019-11-14 22:29:41 +00:00 |
|
R-cran-snow
|
|
|
|
R-cran-som
|
|
|
|
R-cran-udunits2
|
|
|
|
rdkit
|
|
|
|
rmf
|
|
|
|
rubygem-ai4r
|
|
|
|
rubygem-cdo
|
|
|
|
rubygem-rgeo
|
|
|
|
rubygem-rgeo-geojson
|
Cosmetic change
|
2019-11-03 17:23:27 +00:00 |
|
rubygem-rgeo-proj4
|
|
|
|
rubygem-rgeo-shapefile
|
|
|
|
rubygem-ruby-dcl
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
rubygem-ruby-netcdf
|
|
|
|
scidavis
|
math/gsl: update to 2.6
|
2019-10-25 23:41:34 +00:00 |
|
siesta
|
|
|
|
sigrok-cli
|
|
|
|
sigrok-firmware
|
|
|
|
sigrok-firmware-fx2lafw
|
science/sigrok-firmware-fx2lafw: Update to version 0.1.7
|
2019-11-15 20:39:58 +00:00 |
|
sigrok-firmware-utils
|
|
|
|
silo
|
|
|
|
simbody
|
Sprinkle more USES=xorg
|
2019-11-07 20:19:59 +00:00 |
|
simgrid
|
science/simgrid: Update 3.23.2 -> 3.24
|
2019-12-01 00:09:47 +00:00 |
|
simint
|
|
|
|
simlib
|
|
|
|
simsmith
|
Clean up after java/openjdk6 and java/openjdk6-jre removal
|
2019-11-26 21:46:12 +00:00 |
|
smoldyn
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
sparta
|
|
|
|
spglib
|
|
|
|
step
|
KDE Applications: update to 19.08.3
|
2019-11-09 08:13:40 +00:00 |
|
svmlight
|
|
|
|
szip
|
|
|
|
teem
|
|
|
|
tfel
|
science/tfel: completely disable the PYTHON option.
|
2019-12-01 15:56:04 +00:00 |
|
tinker
|
science/tinker: Update 8.7.1 -> 8.7.2
|
2019-11-29 07:44:51 +00:00 |
|
udunits
|
|
|
|
v_sim
|
Make fetchable again.
|
2019-11-19 21:38:47 +00:00 |
|
vipster
|
Mark a few ports BROKEN (unfetchable)
|
2019-11-06 16:26:34 +00:00 |
|
vmd
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
voro++
|
|
|
|
wannier90
|
|
|
|
wwplot
|
|
|
|
wxmacmolplt
|
|
|
|
xcrysden
|
Add USES=xorg USES=gl, ports categories s
|
2019-11-07 17:17:53 +00:00 |
|
xdrawchem
|
|
|
|
xfce4-equake-plugin
|
science/xfce4-equake-plugin: fix build on GCC architectures
|
2019-10-02 14:02:33 +00:00 |
|
yoda
|
|
|
|
Makefile
|
New port: science/highfive: Header-only C++ HDF5 interface
|
2019-11-03 01:27:45 +00:00 |
