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freebsd-ports/science
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Maho Nakata c7fc2e3749 Fix for experimental gcc 4.6 build, and many small fixes 
and improvements, and bump portrevision.

Submitted by:	bf
2011-08-25 22:25:45 +00:00
..
2d-rewriter - remove MD5 2011-07-03 13:22:24 +00:00
2dhf - remove MD5 2011-07-03 13:22:24 +00:00
abinit - remove MD5 2011-07-03 13:22:24 +00:00
afni - remove MD5 2011-07-03 13:22:24 +00:00
at Deprecate some ports where I can't find distfiles and upstream 2011-08-02 17:04:00 +00:00
avogadro - remove MD5 2011-07-03 13:22:24 +00:00
bddsolve - remove MD5 2011-07-03 13:22:24 +00:00
bft - remove MD5 2011-07-03 13:22:24 +00:00
bodr - remove MD5 2011-07-03 13:22:24 +00:00
brian
buddy - remove MD5 2011-07-03 13:22:24 +00:00
cdcl - remove MD5 2011-07-03 13:22:24 +00:00
cdf - remove MD5 2011-07-03 13:22:24 +00:00
cdo - Update to 1.5.1 2011-07-16 06:12:30 +00:00
cgnslib - Bump PORTREVISION for science/hdf5-18 shlib change 2011-07-15 07:00:46 +00:00
checkmol - remove MD5 2011-07-03 13:22:24 +00:00
chemical-mime-data - remove MD5 2011-07-03 13:22:24 +00:00
chemtool - remove MD5 2011-07-03 13:22:24 +00:00
chemtool-devel - remove MD5 2011-07-03 13:22:24 +00:00
clhep Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
colt Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon, 2011-07-21 05:03:02 +00:00
crf++ - remove MD5 2011-07-03 13:22:24 +00:00
dcl - remove MD5 2011-07-03 13:22:24 +00:00
devisor Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon, 2011-07-21 05:03:02 +00:00
dtiquery - remove MD5 2011-07-03 13:22:24 +00:00
ecs - Bump PORTREVISION for science/hdf5-18 shlib change 2011-07-15 07:00:46 +00:00
elmer-eio - remove MD5 2011-07-03 13:22:24 +00:00
elmer-hutiter
elmer-matc - remove MD5 2011-07-03 13:22:24 +00:00
elmer-meshgen2d - remove MD5 2011-07-03 13:22:24 +00:00
elmergrid - remove MD5 2011-07-03 13:22:24 +00:00
elmerpost - remove MD5 2011-07-03 13:22:24 +00:00
epte - remove MD5 2011-07-03 13:22:24 +00:00
euler Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
fastcap fix the clang build 2011-08-20 11:28:54 +00:00
fasthenry fix the clang build 2011-08-20 11:28:54 +00:00
felt - remove MD5 2011-07-03 13:22:24 +00:00
flounder Fix master_site 2011-08-02 16:22:15 +00:00
fvm - Bump PORTREVISION for science/hdf5-18 shlib change 2011-07-15 07:00:46 +00:00
g3data adopt 2011-08-12 09:07:47 +00:00
gamess - remove MD5 2011-07-03 13:22:24 +00:00
gchemutils
gdis - remove MD5 2011-07-03 13:22:24 +00:00
gerris Mark BROKEN: Does not fetch 2011-08-02 16:27:06 +00:00
getdp - remove MD5 2011-07-03 13:22:24 +00:00
ghemical - remove MD5 2011-07-03 13:22:24 +00:00
ghmm - remove MD5 2011-07-03 13:22:24 +00:00
gnudatalanguage - Bump PORTREVISION for science/hdf5-18 shlib change 2011-07-15 07:00:46 +00:00
gramps - update to 3.3.0 2011-08-11 02:25:21 +00:00
gromacs
gsmc - remove MD5 2011-07-03 13:22:24 +00:00
gsystem - remove MD5 2011-07-03 13:22:24 +00:00
gtamsanalyzer
gwyddion - remove MD5 2011-07-03 13:22:24 +00:00
h5utils
harminv - Chase guile shared lib bump 2011-07-31 15:07:08 +00:00
hdf - remove MD5 2011-07-03 13:22:24 +00:00
hdf5 - remove MD5 2011-07-03 13:22:24 +00:00
hdf5-18 - Update to 1.8.7 2011-07-15 06:58:28 +00:00
hdf-java - Bump PORTREVISION for science/hdf5-18 shlib change 2011-07-15 07:00:46 +00:00
hs-bio - Update to 0.5.0.1 2011-07-10 01:03:33 +00:00
ics - remove MD5 2011-07-03 13:22:24 +00:00
InsightToolkit - remove MD5 2011-07-03 13:22:24 +00:00
isaac-cfd - remove MD5 2011-07-03 13:22:24 +00:00
jmol - remove MD5 2011-07-03 13:22:24 +00:00
jstrack - Drop maintainership for this port -- I don't use it any more 2011-08-24 17:01:07 +00:00
kmovisto Fix master_site 2011-08-02 16:22:15 +00:00
kst Drop maintainership (I don't use Qt3 ports anymore) 2011-07-07 17:34:13 +00:00
kst2
lamprop
libctl - Chase guile shared lib bump 2011-07-31 15:07:08 +00:00
libghemical Use libdata/pkgconfig instead of lib/pkgconfig, 2011-08-25 02:01:42 +00:00
libint - remove MD5 2011-07-03 13:22:24 +00:00
libkml - remove MD5 2011-07-03 13:22:24 +00:00
liblinear
liboglappth adjust pkg-plist 2011-08-25 01:55:23 +00:00
libquantum - remove MD5 2011-07-03 13:22:24 +00:00
libsvm
libsvm-python
linsmith - Update to 0.99.22 2011-08-04 10:43:04 +00:00
massxpert
mayavi
mbdyn Fix for experimental gcc 4.6 build, and many small fixes 2011-08-25 22:25:45 +00:00
mcstas - Updated to 1.12c 2011-08-25 21:47:41 +00:00
medit
meep - Chase guile shared lib bump 2011-07-31 15:07:08 +00:00
minc - remove MD5 2011-07-03 13:22:24 +00:00
minc2 - remove MD5 2011-07-03 13:22:24 +00:00
mol2ps - remove MD5 2011-07-03 13:22:24 +00:00
mpb - Chase guile shared lib bump 2011-07-31 15:07:08 +00:00
mpqc
mpqc-mpich
ncs
netcdf
netcdf3-ftn
netcdf4 - Bump PORTREVISION for science/hdf5-18 shlib change 2011-07-15 07:00:46 +00:00
netcdf-ftn
nifticlib - remove MD5 2011-07-03 13:22:24 +00:00
omnetpp Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
openbabel Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
ovt Now that the Java 1.3 and Java 1.4 ports are deprecated and will expire soon, 2011-07-21 05:03:02 +00:00
p5-Algorithm-SVMLight - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol - remove MD5 2011-07-03 13:22:24 +00:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB - remove MD5 2011-07-03 13:22:24 +00:00
p5-Geo-WebService-Elevation-USGS - Update to 0.008 2011-08-01 02:13:31 +00:00
p5-PerlMol
p5-Physics-Unit - remove MD5 2011-07-03 13:22:24 +00:00
paje - update MASTER_SITES 2011-08-07 12:38:44 +00:00
paraview Update to 3.10.1 2011-08-16 21:55:45 +00:00
peekabot Build fixes with glib 2.28. gtk 2.24, gtkmm 2.24 and vala 0.12. 2011-07-30 09:39:44 +00:00
pnetcdf
psi3 - remove MD5 2011-07-03 13:22:24 +00:00
psychopy - Update to 1.65.00 2011-07-05 00:47:55 +00:00
py-biolccc
py-DendroPy - Updated to 3.9.0 2011-08-24 18:15:24 +00:00
py-h5py - remove MD5 2011-07-03 13:22:24 +00:00
py-hcluster - remove MD5 2011-07-03 13:22:24 +00:00
py-mdp
py-mlpy
py-netCDF4 - Update to 0.97 2011-08-25 11:39:43 +00:00
py-obspy-core
py-obspy.gse2
py-obspy.imaging
py-obspy.mseed
py-obspy.signal
py-obspy.wav
py-obspy.xseed
py-openbabel - remove MD5 2011-07-03 13:22:24 +00:00
py-paida - remove MD5 2011-07-03 13:22:24 +00:00
py-pydicom - remove MD5 2011-07-03 13:22:24 +00:00
py-scimath
py-scipy
py-ws2300 - New port science/py-ws2300 2011-07-01 20:23:41 +00:00
pybrain - remove MD5 2011-07-03 13:22:24 +00:00
pycdf - remove MD5 2011-07-03 13:22:24 +00:00
pynn - remove MD5 2011-07-03 13:22:24 +00:00
pyvox Remove WWW entries from unmaintained ports that return 404 or where the domain 2011-08-02 20:58:23 +00:00
qcl - remove MD5 2011-07-03 13:22:24 +00:00
qtresistors - remove MD5 2011-07-03 13:22:24 +00:00
R-cran-AMORE update R to 2.13.1 [1], and adjust dependent ports (this 2011-07-28 04:19:58 +00:00
R-cran-bayesm update R to 2.13.1 [1], and adjust dependent ports (this 2011-07-28 04:19:58 +00:00
ruby-dcl - remove MD5 2011-07-03 13:22:24 +00:00
ruby-gphys - remove MD5 2011-07-03 13:22:24 +00:00
ruby-netcdf
rubygem-ai4r
silo - remove MD5 2011-07-03 13:22:24 +00:00
simlib - remove MD5 2011-07-03 13:22:24 +00:00
svmlight Fix fetch. 2011-07-08 04:07:55 +00:00
szip - remove MD5 2011-07-03 13:22:24 +00:00
udunits
v_sim
veusz Update to 1.12 2011-07-21 11:11:03 +00:00
vis5d+ Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
vmd
x11iraf - remove MD5 2011-07-03 13:22:24 +00:00
xmakemol Remove USE_GNOME=gnometarget from ports. It has been a empty keyword since 2011-08-11 19:20:17 +00:00
xmds - remove MD5 2011-07-03 13:22:24 +00:00
Makefile Remove some expired ports 2011-08-02 06:31:29 +00:00